RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 UQCRQO14949 82 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 NDUFA7O95182 113 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 LGALS2P05162 132 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 BCL3P20749 454 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 NTF4P34130 210 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 CT83Q5H943 113 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 BCL6BQ8N143 479 aaPredicted RBP3.48□□□□□ -1.85
NEDD4-201ENST00000338963 C8orf44Q96CB5 159 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 GFRA4Q9GZZ7 299 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 TAC3Q9UHF0 121 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 V9GYV3 84 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 ACYP1P07311 99 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 CSN3P07498 182 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 GLRXP35754 106 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 ZIC1Q15915 447 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 ZNF841Q6ZN19 808 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 FAM19A2Q8N3H0 131 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 LINC00479Q96M42 142 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 TM2D2Q9BX73 214 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 M0QZQ0 153 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 HRKO00198 91 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 DUSP14O95147 198 aaKnown RBP3.47□□□□□ -1.85
NEDD4-201ENST00000338963 PPYP01298 95 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 FCGR2BP31994 310 aaPredicted RBP3.47□□□□□ -1.85
NEDD4-201ENST00000338963 H1FNTQ75WM6 255 aaPredicted RBP3.47□□□□□ -1.85
NEDD4-201ENST00000338963 RRHO14718 337 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 SPINT3P49223 89 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 XGP55808 180 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 POU3F1Q03052 451 aaPredicted RBP3.47□□□□□ -1.85
NEDD4-201ENST00000338963 SP6Q3SY56 376 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 TMEM178AQ8NBL3 297 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 BAHD1Q8TBE0 780 aaPredicted RBP3.47□□□□□ -1.85
NEDD4-201ENST00000338963 CHAC1Q9BUX1 264 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 PPDPFQ9H3Y8 114 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 AP5S1Q9NUS5 200 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 C19orf25Q9UFG5 118 aaPredicted RBP3.47□□□□□ -1.85
NEDD4-201ENST00000338963 LAMTOR3Q9UHA4 124 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 C17orf102A2RUQ5 167 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 VWC2LB2RUY7 222 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 RS1O15537 224 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 NAPSAO96009 420 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 TEPPQ6URK8 271 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 TBC1D26Q86UD7 250 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 RPP25LQ8N5L8 163 aaKnown RBP3.47□□□□□ -1.85
NEDD4-201ENST00000338963 OCC1Q8TAD7 63 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 C20orf173Q96LM9 149 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 TECRQ9NZ01 308 aaKnown RBP3.47□□□□□ -1.85
NEDD4-201ENST00000338963 KCNE3Q9Y6H6 103 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 SIPA1L3O60292 1781 aaPredicted RBP3.47□□□□□ -1.85
NEDD4-201ENST00000338963 UBR2Q8IWV8 1755 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 hDV102S1A0JD36 115 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 PRSS29PA6NIE9 313 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 NDUFS7O75251 213 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 C8orf89P0DMQ9 161 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 KLF17Q5JT82 389 aaPredicted RBP3.47□□□□□ -1.85
NEDD4-201ENST00000338963 CNRIP1Q96F85 164 aaPredicted RBP3.47□□□□□ -1.85
NEDD4-201ENST00000338963 TNFRSF13BO14836 293 aaPredicted RBP3.47□□□□□ -1.85
NEDD4-201ENST00000338963 NTN1O95631 604 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 TMEM258P61165 79 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 TMEM14EPQ6UXP3 125 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 ZDHHC23Q8IYP9 409 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 OR2A1Q8NGT9 310 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 HSD17B10Q99714 261 aaKnown RBP3.47□□□□□ -1.85
NEDD4-201ENST00000338963 CDIP1Q9H305 208 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 PRORYQ9H606 182 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 VSIRQ9H7M9 311 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 ZNF442Q9H7R0 627 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 TAF1P21675 1872 aa3.47□□□□□ -1.85
NEDD4-201ENST00000338963 CCL15-CCL14A0A0B4J2E2 113 aa3.46□□□□□ -1.85
NEDD4-201ENST00000338963 A0A0G2JLL6 359 aaPredicted RBP3.46□□□□□ -1.85
NEDD4-201ENST00000338963 IGHMP01871 453 aa3.46□□□□□ -1.85
NEDD4-201ENST00000338963 CCL1P22362 96 aa3.46□□□□□ -1.85
NEDD4-201ENST00000338963 CAMPP49913 170 aa3.46□□□□□ -1.85
NEDD4-201ENST00000338963 DPTQ07507 201 aa3.46□□□□□ -1.85
NEDD4-201ENST00000338963 POM121L1PQ3SYA9 428 aa3.46□□□□□ -1.85
NEDD4-201ENST00000338963 FAM159AQ6UWV7 190 aa3.46□□□□□ -1.85
NEDD4-201ENST00000338963 Q71RC1 249 aaPredicted RBP3.46□□□□□ -1.85
NEDD4-201ENST00000338963 LINC00526Q96FQ7 95 aa3.46□□□□□ -1.85
NEDD4-201ENST00000338963 SCARF2Q96GP6 870 aaPredicted RBP3.46□□□□□ -1.85
NEDD4-201ENST00000338963 NPCDR1Q9BY65 106 aa3.46□□□□□ -1.85
NEDD4-201ENST00000338963 AKAP11Q9UKA4 1901 aa3.46□□□□□ -1.85
NEDD4-201ENST00000338963 WIPF3A6NGB9 483 aa3.46□□□□□ -1.86
NEDD4-201ENST00000338963 A8MWL6 223 aa3.46□□□□□ -1.86
NEDD4-201ENST00000338963 NDUFC2O95298 119 aa3.46□□□□□ -1.86
NEDD4-201ENST00000338963 MYOD1P15172 320 aa3.46□□□□□ -1.86
NEDD4-201ENST00000338963 CLDN17P56750 224 aa3.46□□□□□ -1.86
NEDD4-201ENST00000338963 MLF2Q15773 248 aaPredicted RBP3.46□□□□□ -1.86
NEDD4-201ENST00000338963 CDKN3Q16667 212 aa3.46□□□□□ -1.86
NEDD4-201ENST00000338963 MBNL2Q5VZF2 373 aaKnown RBP3.46□□□□□ -1.86
NEDD4-201ENST00000338963 ASPHD2Q6ICH7 369 aa3.46□□□□□ -1.86
NEDD4-201ENST00000338963 C17orf99Q6UX52 265 aa3.46□□□□□ -1.86
NEDD4-201ENST00000338963 RPRMLQ8N4K4 120 aa3.46□□□□□ -1.86
NEDD4-201ENST00000338963 OR1L4Q8NGR5 311 aa3.46□□□□□ -1.86
NEDD4-201ENST00000338963 TMEM160Q9NX00 188 aa3.46□□□□□ -1.86
NEDD4-201ENST00000338963 AFDNP55196 1824 aaKnown RBP3.46□□□□□ -1.86
NEDD4-201ENST00000338963 PRR32B1ATL7 298 aa3.46□□□□□ -1.86
NEDD4-201ENST00000338963 PSG4Q00888 419 aa3.46□□□□□ -1.86
NEDD4-201ENST00000338963 CXorf66Q5JRM2 361 aaPredicted RBP3.46□□□□□ -1.86
NEDD4-201ENST00000338963 SPACA3Q8IXA5 215 aa3.46□□□□□ -1.86
NEDD4-201ENST00000338963 C3orf22Q8N5N4 141 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms