RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 GABRA2P47869 451 aa8.91□□□□□ -0.98
RTN3-201ENST00000338850 ELLP55199 621 aaPredicted RBP8.91□□□□□ -0.98
RTN3-201ENST00000338850 NDUFA6P56556 154 aa8.91□□□□□ -0.98
RTN3-201ENST00000338850 COL10A1Q03692 680 aa8.91□□□□□ -0.98
RTN3-201ENST00000338850 FFAR4Q5NUL3 377 aa8.91□□□□□ -0.98
RTN3-201ENST00000338850 Q6ZR03 302 aa8.91□□□□□ -0.98
RTN3-201ENST00000338850 OR52L2PQ8NGH6 319 aa8.91□□□□□ -0.98
RTN3-201ENST00000338850 ABHD5Q8WTS1 349 aa8.91□□□□□ -0.98
RTN3-201ENST00000338850 TMEM170AQ8WVE7 144 aa8.91□□□□□ -0.98
RTN3-201ENST00000338850 FRZBQ92765 325 aa8.91□□□□□ -0.98
RTN3-201ENST00000338850 RAB24Q969Q5 203 aa8.91□□□□□ -0.98
RTN3-201ENST00000338850 S100PBPQ96BU1 408 aa8.91□□□□□ -0.98
RTN3-201ENST00000338850 R3HDM4Q96D70 268 aa8.91□□□□□ -0.98
RTN3-201ENST00000338850 ADTRPQ96IZ2 230 aa8.91□□□□□ -0.98
RTN3-201ENST00000338850 FOXC2Q99958 501 aa8.91□□□□□ -0.98
RTN3-201ENST00000338850 PARLQ9H300 379 aa8.91□□□□□ -0.98
RTN3-201ENST00000338850 OR51B6Q9H340 312 aa8.91□□□□□ -0.98
RTN3-201ENST00000338850 OR6C3Q9NZP0 311 aa8.91□□□□□ -0.98
RTN3-201ENST00000338850 JKAMPQ9P055 326 aa8.91□□□□□ -0.98
RTN3-201ENST00000338850 ZMAT5Q9UDW3 170 aaKnown RBP8.91□□□□□ -0.98
RTN3-201ENST00000338850 LY96Q9Y6Y9 160 aa8.91□□□□□ -0.98
RTN3-201ENST00000338850 ABCA4P78363 2273 aa8.91□□□□□ -0.98
RTN3-201ENST00000338850 PRRC2AP48634 2157 aaKnown RBP8.9□□□□□ -0.98
RTN3-201ENST00000338850 ACANP16112 2415 aa8.9□□□□□ -0.98
RTN3-201ENST00000338850 TRAV39A0A0B4J263 110 aa8.9□□□□□ -0.98
RTN3-201ENST00000338850 LYZL6O75951 148 aa8.9□□□□□ -0.98
RTN3-201ENST00000338850 YIF1AO95070 293 aa8.9□□□□□ -0.98
RTN3-201ENST00000338850 KRASP01116 189 aa8.9□□□□□ -0.98
RTN3-201ENST00000338850 CGAP01215 116 aa8.9□□□□□ -0.98
RTN3-201ENST00000338850 VDAC2P45880 294 aaPredicted RBP8.9□□□□□ -0.98
RTN3-201ENST00000338850 CEBPGP53567 150 aa8.9□□□□□ -0.98
RTN3-201ENST00000338850 FGF8P55075 233 aaPredicted RBP8.9□□□□□ -0.98
RTN3-201ENST00000338850 AESQ08117 197 aa8.9□□□□□ -0.98
RTN3-201ENST00000338850 FOXF2Q12947 444 aa8.9□□□□□ -0.98
RTN3-201ENST00000338850 OR8G2PQ6IF36 304 aa8.9□□□□□ -0.98
RTN3-201ENST00000338850 KCNIP4Q6PIL6 250 aa8.9□□□□□ -0.98
RTN3-201ENST00000338850 C16orf82Q7Z2V1 217 aa8.9□□□□□ -0.98
RTN3-201ENST00000338850 PRR18Q8N4B5 295 aa8.9□□□□□ -0.98
RTN3-201ENST00000338850 OR13A1Q8NGR1 328 aa8.9□□□□□ -0.98
RTN3-201ENST00000338850 MRGPRDQ8TDS7 321 aa8.9□□□□□ -0.98
RTN3-201ENST00000338850 DDB2Q92466 427 aa8.9□□□□□ -0.98
RTN3-201ENST00000338850 TMUB1Q9BVT8 246 aa8.9□□□□□ -0.98
RTN3-201ENST00000338850 LINC00574Q9H8X3 128 aa8.9□□□□□ -0.98
RTN3-201ENST00000338850 LINC00473A8K010 186 aa8.89□□□□□ -0.99
RTN3-201ENST00000338850 IGHV3-13P01766 116 aa8.89□□□□□ -0.99
RTN3-201ENST00000338850 SOD3P08294 240 aa8.89□□□□□ -0.99
RTN3-201ENST00000338850 CGB3P0DN86 165 aa8.89□□□□□ -0.99
RTN3-201ENST00000338850 CGB7P0DN87 165 aa8.89□□□□□ -0.99
RTN3-201ENST00000338850 CD1BP29016 333 aa8.89□□□□□ -0.99
RTN3-201ENST00000338850 GPR12P47775 334 aa8.89□□□□□ -0.99
RTN3-201ENST00000338850 ERVK-16P61578 105 aa8.89□□□□□ -0.99
RTN3-201ENST00000338850 ZNF816Q0VGE8 651 aaPredicted RBP8.89□□□□□ -0.99
RTN3-201ENST00000338850 MORN2Q502X0 79 aa8.89□□□□□ -0.99
RTN3-201ENST00000338850 ACTL10Q5JWF8 245 aa8.89□□□□□ -0.99
RTN3-201ENST00000338850 BEND4Q6ZU67 534 aa8.89□□□□□ -0.99
RTN3-201ENST00000338850 OR4X1Q8NH49 305 aa8.89□□□□□ -0.99
RTN3-201ENST00000338850 OR4S2Q8NH73 311 aa8.89□□□□□ -0.99
RTN3-201ENST00000338850 LINC01560Q8TB33 94 aa8.89□□□□□ -0.99
RTN3-201ENST00000338850 LRRC29Q8WV35 223 aa8.89□□□□□ -0.99
RTN3-201ENST00000338850 PFDN5Q99471 154 aa8.89□□□□□ -0.99
RTN3-201ENST00000338850 FAM234AQ9H0X4 552 aa8.89□□□□□ -0.99
RTN3-201ENST00000338850 SLC25A22Q9H936 323 aa8.89□□□□□ -0.99
RTN3-201ENST00000338850 GFOD1Q9NXC2 390 aa8.89□□□□□ -0.99
RTN3-201ENST00000338850 CLN8Q9UBY8 286 aa8.89□□□□□ -0.99
RTN3-201ENST00000338850 PROCRQ9UNN8 238 aa8.89□□□□□ -0.99
RTN3-201ENST00000338850 LSM4Q9Y4Z0 139 aaKnown RBP8.89□□□□□ -0.99
RTN3-201ENST00000338850 SLC25A15Q9Y619 301 aa8.89□□□□□ -0.99
RTN3-201ENST00000338850 URGCP-MRPS24S4R325 110 aa8.89□□□□□ -0.99
RTN3-201ENST00000338850 IGLV3-9A0A075B6K5 115 aa8.88□□□□□ -0.99
RTN3-201ENST00000338850 IGHV1-18A0A0C4DH31 117 aa8.88□□□□□ -0.99
RTN3-201ENST00000338850 PPP5D1E7EU14 171 aa8.88□□□□□ -0.99
RTN3-201ENST00000338850 WNT9BO14905 357 aa8.88□□□□□ -0.99
RTN3-201ENST00000338850 TNFSF13O75888 250 aa8.88□□□□□ -0.99
RTN3-201ENST00000338850 LHBP01229 141 aa8.88□□□□□ -0.99
RTN3-201ENST00000338850 GYPAP02724 150 aa8.88□□□□□ -0.99
RTN3-201ENST00000338850 STAG3L2P0CL84 134 aa8.88□□□□□ -0.99
RTN3-201ENST00000338850 STAG3L3P0CL85 134 aa8.88□□□□□ -0.99
RTN3-201ENST00000338850 PRDX2P32119 198 aa8.88□□□□□ -0.99
RTN3-201ENST00000338850 GLRXP35754 106 aa8.88□□□□□ -0.99
RTN3-201ENST00000338850 GALR1P47211 349 aa8.88□□□□□ -0.99
RTN3-201ENST00000338850 THBS3P49746 956 aa8.88□□□□□ -0.99
RTN3-201ENST00000338850 LOXL3P58215 753 aa8.88□□□□□ -0.99
RTN3-201ENST00000338850 FOXL1Q12952 345 aa8.88□□□□□ -0.99
RTN3-201ENST00000338850 ADIRFQ15847 76 aa8.88□□□□□ -0.99
RTN3-201ENST00000338850 Q3ZCU0 254 aa8.88□□□□□ -0.99
RTN3-201ENST00000338850 OR2B11Q5JQS5 317 aa8.88□□□□□ -0.99
RTN3-201ENST00000338850 TIMM23BQ5SRD1 257 aa8.88□□□□□ -0.99
RTN3-201ENST00000338850 BHLHA15Q7RTS1 189 aaPredicted RBP8.88□□□□□ -0.99
RTN3-201ENST00000338850 TMEM144Q7Z5S9 345 aa8.88□□□□□ -0.99
RTN3-201ENST00000338850 GCNT2Q8N0V5 402 aa8.88□□□□□ -0.99
RTN3-201ENST00000338850 CD177Q8N6Q3 437 aa8.88□□□□□ -0.99
RTN3-201ENST00000338850 CORO2AQ92828 525 aa8.88□□□□□ -0.99
RTN3-201ENST00000338850 C11orf52Q96A22 123 aa8.88□□□□□ -0.99
RTN3-201ENST00000338850 MBD6Q96DN6 1003 aa8.88□□□□□ -0.99
RTN3-201ENST00000338850 IFI27L2Q9H2X8 130 aa8.88□□□□□ -0.99
RTN3-201ENST00000338850 PRDM13Q9H4Q3 707 aa8.88□□□□□ -0.99
RTN3-201ENST00000338850 FOXA2Q9Y261 457 aaPredicted RBP8.88□□□□□ -0.99
RTN3-201ENST00000338850 FLNAP21333 2647 aaKnown RBP8.87□□□□□ -0.99
RTN3-201ENST00000338850 C15orf61A6NNL5 157 aa8.87□□□□□ -0.99
RTN3-201ENST00000338850 C11orf94C9JXX5 98 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms