RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 RAB2AP61019 212 aa13.15□□□□□ -0.3
HPS1-202ENST00000338546 DLK1P80370 383 aa13.15□□□□□ -0.3
HPS1-202ENST00000338546 ETV3LQ6ZN32 361 aa13.15□□□□□ -0.3
HPS1-202ENST00000338546 TEX45Q8NA69 505 aa13.15□□□□□ -0.3
HPS1-202ENST00000338546 SLC24A4Q8NFF2 622 aa13.15□□□□□ -0.3
HPS1-202ENST00000338546 OR1L8Q8NGR8 309 aa13.15□□□□□ -0.3
HPS1-202ENST00000338546 RPEQ96AT9 228 aa13.15□□□□□ -0.3
HPS1-202ENST00000338546 HRNRQ86YZ3 2850 aaPredicted RBP13.15□□□□□ -0.3
HPS1-202ENST00000338546 IGHV1-3A0A0C4DH29 117 aa13.15□□□□□ -0.3
HPS1-202ENST00000338546 UBE2L5PA0A1B0GUS4 154 aa13.15□□□□□ -0.3
HPS1-202ENST00000338546 NDUFS7O75251 213 aa13.15□□□□□ -0.3
HPS1-202ENST00000338546 HTR1DP28221 377 aa13.15□□□□□ -0.3
HPS1-202ENST00000338546 ARF6P62330 175 aa13.15□□□□□ -0.3
HPS1-202ENST00000338546 TUSC1Q2TAM9 212 aa13.15□□□□□ -0.3
HPS1-202ENST00000338546 PNKDQ8N490 385 aa13.15□□□□□ -0.3
HPS1-202ENST00000338546 COMMD5Q9GZQ3 224 aa13.15□□□□□ -0.3
HPS1-202ENST00000338546 TET2Q6N021 2002 aaPredicted RBP13.14□□□□□ -0.31
HPS1-202ENST00000338546 A0A1W2PN81 502 aa13.14□□□□□ -0.31
HPS1-202ENST00000338546 PRSS46E5RG02 174 aa13.14□□□□□ -0.31
HPS1-202ENST00000338546 C17orf112F2Z3M2 114 aa13.14□□□□□ -0.31
HPS1-202ENST00000338546 NDUFS8O00217 210 aa13.14□□□□□ -0.31
HPS1-202ENST00000338546 C1QL1O75973 258 aa13.14□□□□□ -0.31
HPS1-202ENST00000338546 H2AFB1P0C5Y9 115 aa13.14□□□□□ -0.31
HPS1-202ENST00000338546 COX7A1P24310 79 aa13.14□□□□□ -0.31
HPS1-202ENST00000338546 NPY1RP25929 384 aa13.14□□□□□ -0.31
HPS1-202ENST00000338546 CD1BP29016 333 aa13.14□□□□□ -0.31
HPS1-202ENST00000338546 CHRNA7P36544 502 aa13.14□□□□□ -0.31
HPS1-202ENST00000338546 FHITP49789 147 aa13.14□□□□□ -0.31
HPS1-202ENST00000338546 SP5Q6BEB4 398 aaPredicted RBP13.14□□□□□ -0.31
HPS1-202ENST00000338546 CCL19Q99731 98 aa13.14□□□□□ -0.31
HPS1-202ENST00000338546 PBDC1Q9BVG4 233 aa13.14□□□□□ -0.31
HPS1-202ENST00000338546 NDUFA4L2Q9NRX3 87 aa13.14□□□□□ -0.31
HPS1-202ENST00000338546 DPM3Q9P2X0 92 aa13.14□□□□□ -0.31
HPS1-202ENST00000338546 WDR83OSQ9Y284 106 aa13.14□□□□□ -0.31
HPS1-202ENST00000338546 FBXO7Q9Y3I1 522 aa13.14□□□□□ -0.31
HPS1-202ENST00000338546 ODF3BA8MYP8 253 aa13.13□□□□□ -0.31
HPS1-202ENST00000338546 OOSP1A8MZH6 123 aa13.13□□□□□ -0.31
HPS1-202ENST00000338546 RNASEK-C17orf49H0YIS7 233 aa13.13□□□□□ -0.31
HPS1-202ENST00000338546 IGHV4-39P01824 125 aa13.13□□□□□ -0.31
HPS1-202ENST00000338546 PRB1P04280 392 aa13.13□□□□□ -0.31
HPS1-202ENST00000338546 MAS1LP35410 378 aa13.13□□□□□ -0.31
HPS1-202ENST00000338546 PAX2Q02962 417 aa13.13□□□□□ -0.31
HPS1-202ENST00000338546 PEA15Q15121 130 aa13.13□□□□□ -0.31
HPS1-202ENST00000338546 BSXQ3C1V8 233 aa13.13□□□□□ -0.31
HPS1-202ENST00000338546 C10orf91Q5T1B1 145 aa13.13□□□□□ -0.31
HPS1-202ENST00000338546 TPTE2P1Q5T6R2 138 aa13.13□□□□□ -0.31
HPS1-202ENST00000338546 ZNF709Q8N972 641 aa13.13□□□□□ -0.31
HPS1-202ENST00000338546 RBMXL1Q96E39 390 aaKnown RBP13.13□□□□□ -0.31
HPS1-202ENST00000338546 RSG1Q9BU20 258 aa13.13□□□□□ -0.31
HPS1-202ENST00000338546 POLR3KQ9Y2Y1 108 aaPredicted RBP13.13□□□□□ -0.31
HPS1-202ENST00000338546 RRHO14718 337 aa13.12□□□□□ -0.31
HPS1-202ENST00000338546 IFNA4P05014 189 aa13.12□□□□□ -0.31
HPS1-202ENST00000338546 FGF7P21781 194 aa13.12□□□□□ -0.31
HPS1-202ENST00000338546 C2orf83Q53S99 150 aa13.12□□□□□ -0.31
HPS1-202ENST00000338546 TMEM41BQ5BJD5 291 aa13.12□□□□□ -0.31
HPS1-202ENST00000338546 MRPL41Q8IXM3 137 aaKnown RBP13.12□□□□□ -0.31
HPS1-202ENST00000338546 TMEM170AQ8WVE7 144 aa13.12□□□□□ -0.31
HPS1-202ENST00000338546 MBD3L1Q8WWY6 194 aa13.12□□□□□ -0.31
HPS1-202ENST00000338546 NARFLQ9H6Q4 476 aa13.12□□□□□ -0.31
HPS1-202ENST00000338546 TREM1Q9NP99 234 aa13.12□□□□□ -0.31
HPS1-202ENST00000338546 FOXH1O75593 365 aa13.11□□□□□ -0.31
HPS1-202ENST00000338546 ZFP36P26651 326 aaKnown RBP13.11□□□□□ -0.31
HPS1-202ENST00000338546 LMO4P61968 165 aa13.11□□□□□ -0.31
HPS1-202ENST00000338546 ERHP84090 104 aaKnown RBP13.11□□□□□ -0.31
HPS1-202ENST00000338546 HABP2Q14520 560 aaPredicted RBP13.11□□□□□ -0.31
HPS1-202ENST00000338546 MINOS1Q5TGZ0 78 aa13.11□□□□□ -0.31
HPS1-202ENST00000338546 MOB3BQ86TA1 216 aa13.11□□□□□ -0.31
HPS1-202ENST00000338546 MMD2Q8IY49 270 aa13.11□□□□□ -0.31
HPS1-202ENST00000338546 NARS2Q96I59 477 aaKnown RBP13.11□□□□□ -0.31
HPS1-202ENST00000338546 SEC11CQ9BY50 192 aa13.11□□□□□ -0.31
HPS1-202ENST00000338546 NPCDR1Q9BY65 106 aa13.11□□□□□ -0.31
HPS1-202ENST00000338546 NPVFQ9HCQ7 196 aa13.11□□□□□ -0.31
HPS1-202ENST00000338546 RPRMQ9NS64 109 aa13.11□□□□□ -0.31
HPS1-202ENST00000338546 KIAA1456Q9P272 454 aa13.11□□□□□ -0.31
HPS1-202ENST00000338546 RFNGQ9Y644 331 aa13.11□□□□□ -0.31
HPS1-202ENST00000338546 MINOS1-NBL1R4GNA1 71 aa13.11□□□□□ -0.31
HPS1-202ENST00000338546 IGHV2-70DA0A0C4DH43 119 aa13.11□□□□□ -0.31
HPS1-202ENST00000338546 A0A1W2PPI3 338 aa13.11□□□□□ -0.31
HPS1-202ENST00000338546 CA2P00918 260 aa13.11□□□□□ -0.31
HPS1-202ENST00000338546 CRYGBP07316 175 aa13.11□□□□□ -0.31
HPS1-202ENST00000338546 GUK1Q16774 197 aa13.11□□□□□ -0.31
HPS1-202ENST00000338546 HCP5Q6MZN7 132 aa13.11□□□□□ -0.31
HPS1-202ENST00000338546 CCDC144NLQ6NUI1 221 aa13.11□□□□□ -0.31
HPS1-202ENST00000338546 SPSB3Q6PJ21 355 aa13.11□□□□□ -0.31
HPS1-202ENST00000338546 CLDND2Q8NHS1 167 aa13.11□□□□□ -0.31
HPS1-202ENST00000338546 BPESC1Q9GZL8 116 aa13.11□□□□□ -0.31
HPS1-202ENST00000338546 KCNIP2Q9NS61 270 aa13.11□□□□□ -0.31
HPS1-202ENST00000338546 CARHSP1Q9Y2V2 147 aaKnown RBP13.11□□□□□ -0.31
HPS1-202ENST00000338546 RNF224P0DH78 156 aa13.1□□□□□ -0.31
HPS1-202ENST00000338546 PAX1P15863 534 aa13.1□□□□□ -0.31
HPS1-202ENST00000338546 PMS2P11Q13670 270 aa13.1□□□□□ -0.31
HPS1-202ENST00000338546 PIMREGQ9BSJ6 248 aa13.1□□□□□ -0.31
HPS1-202ENST00000338546 SCRT1Q9BWW7 348 aa13.1□□□□□ -0.31
HPS1-202ENST00000338546 HINT2Q9BX68 163 aa13.1□□□□□ -0.31
HPS1-202ENST00000338546 SIRPDQ9H106 197 aa13.1□□□□□ -0.31
HPS1-202ENST00000338546 ZNF430Q9H8G1 570 aaPredicted RBP13.1□□□□□ -0.31
HPS1-202ENST00000338546 SIRT7Q9NRC8 400 aa13.1□□□□□ -0.31
HPS1-202ENST00000338546 TNCP24821 2201 aa13.09□□□□□ -0.31
HPS1-202ENST00000338546 AGPAT2O15120 278 aa13.09□□□□□ -0.31
HPS1-202ENST00000338546 SLC25A17O43808 307 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms