RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 OR10G7Q8NGN6 311 aa18.9■□□□□ 0.62
CLPTM1-201ENST00000337392 DVL1O14640 695 aa18.89■□□□□ 0.62
CLPTM1-201ENST00000337392 BCL2P10415 239 aa18.89■□□□□ 0.62
CLPTM1-201ENST00000337392 DLK1P80370 383 aa18.89■□□□□ 0.62
CLPTM1-201ENST00000337392 OR4S2Q8NH73 311 aa18.89■□□□□ 0.62
CLPTM1-201ENST00000337392 MRPL20Q9BYC9 149 aaKnown RBP18.89■□□□□ 0.62
CLPTM1-201ENST00000337392 VDAC2P45880 294 aaPredicted RBP18.89■□□□□ 0.61
CLPTM1-201ENST00000337392 RBPJQ06330 500 aa18.89■□□□□ 0.61
CLPTM1-201ENST00000337392 NCMAPQ5T1S8 102 aa18.89■□□□□ 0.61
CLPTM1-201ENST00000337392 TCTEX1D1Q8N7M0 179 aa18.89■□□□□ 0.61
CLPTM1-201ENST00000337392 KDF1Q8NAX2 398 aaPredicted RBP18.89■□□□□ 0.61
CLPTM1-201ENST00000337392 VKORC1Q9BQB6 163 aa18.89■□□□□ 0.61
CLPTM1-201ENST00000337392 TCEAL7Q9BRU2 100 aa18.89■□□□□ 0.61
CLPTM1-201ENST00000337392 A0A1B0GW64 132 aa18.88■□□□□ 0.61
CLPTM1-201ENST00000337392 hADV38S2A0JD32 116 aa18.88■□□□□ 0.61
CLPTM1-201ENST00000337392 RAB7AP51149 207 aa18.88■□□□□ 0.61
CLPTM1-201ENST00000337392 SERF2P84101 59 aa18.88■□□□□ 0.61
CLPTM1-201ENST00000337392 SSMEM1Q8WWF3 244 aa18.88■□□□□ 0.61
CLPTM1-201ENST00000337392 NKX6-3A6NJ46 265 aa18.88■□□□□ 0.61
CLPTM1-201ENST00000337392 OR8U8P0C7N1 319 aa18.88■□□□□ 0.61
CLPTM1-201ENST00000337392 FAM90A2PQ658T7 463 aa18.88■□□□□ 0.61
CLPTM1-201ENST00000337392 PINX1Q96BK5 328 aaKnown RBP18.88■□□□□ 0.61
CLPTM1-201ENST00000337392 BTBD17A6NE02 478 aa18.87■□□□□ 0.61
CLPTM1-201ENST00000337392 FOLR2P14207 255 aa18.87■□□□□ 0.61
CLPTM1-201ENST00000337392 CD1BP29016 333 aa18.87■□□□□ 0.61
CLPTM1-201ENST00000337392 TAGLN2P37802 199 aaKnown RBP18.87■□□□□ 0.61
CLPTM1-201ENST00000337392 SPCS3P61009 180 aa18.87■□□□□ 0.61
CLPTM1-201ENST00000337392 SLC25A48Q6ZT89 311 aaKnown RBP18.87■□□□□ 0.61
CLPTM1-201ENST00000337392 CIB3Q96Q77 187 aaPredicted RBP18.87■□□□□ 0.61
CLPTM1-201ENST00000337392 MS4A5Q9H3V2 200 aa18.87■□□□□ 0.61
CLPTM1-201ENST00000337392 HBE1P02100 147 aa18.87■□□□□ 0.61
CLPTM1-201ENST00000337392 ZNF674Q2M3X9 581 aa18.87■□□□□ 0.61
CLPTM1-201ENST00000337392 OR13D1Q8NGV5 346 aa18.87■□□□□ 0.61
CLPTM1-201ENST00000337392 CA5BP1Q8WTZ4 195 aa18.87■□□□□ 0.61
CLPTM1-201ENST00000337392 MBD3L1Q8WWY6 194 aa18.87■□□□□ 0.61
CLPTM1-201ENST00000337392 ZNF714Q96N38 554 aa18.87■□□□□ 0.61
CLPTM1-201ENST00000337392 CISD1Q9NZ45 108 aaKnown RBP18.87■□□□□ 0.61
CLPTM1-201ENST00000337392 LINC00312Q9Y6C7 94 aa18.87■□□□□ 0.61
CLPTM1-201ENST00000337392 FLNCQ14315 2725 aa18.87■□□□□ 0.61
CLPTM1-201ENST00000337392 HSPB1P04792 205 aaKnown RBP18.87■□□□□ 0.61
CLPTM1-201ENST00000337392 LY6DQ14210 128 aa18.87■□□□□ 0.61
CLPTM1-201ENST00000337392 MLANAQ16655 118 aa18.87■□□□□ 0.61
CLPTM1-201ENST00000337392 OR10W1Q8NGF6 305 aa18.87■□□□□ 0.61
CLPTM1-201ENST00000337392 IGFBPL1Q8WX77 278 aa18.87■□□□□ 0.61
CLPTM1-201ENST00000337392 RAB24Q969Q5 203 aa18.87■□□□□ 0.61
CLPTM1-201ENST00000337392 C14orf144Q96I85 54 aa18.87■□□□□ 0.61
CLPTM1-201ENST00000337392 TMEM204Q9BSN7 226 aa18.87■□□□□ 0.61
CLPTM1-201ENST00000337392 EGLN1Q9GZT9 426 aa18.87■□□□□ 0.61
CLPTM1-201ENST00000337392 IGHV3-72A0A0B4J1Y9 119 aa18.86■□□□□ 0.61
CLPTM1-201ENST00000337392 C15orf61A6NNL5 157 aa18.86■□□□□ 0.61
CLPTM1-201ENST00000337392 KIAA0141Q14154 515 aaPredicted RBP18.86■□□□□ 0.61
CLPTM1-201ENST00000337392 TREML4Q6UXN2 200 aa18.86■□□□□ 0.61
CLPTM1-201ENST00000337392 C1orf159Q96HA4 380 aa18.86■□□□□ 0.61
CLPTM1-201ENST00000337392 SLC35D1Q9NTN3 355 aa18.86■□□□□ 0.61
CLPTM1-201ENST00000337392 CELSR2Q9HCU4 2923 aa18.86■□□□□ 0.61
CLPTM1-201ENST00000337392 MIC13Q5XKP0 118 aa18.86■□□□□ 0.61
CLPTM1-201ENST00000337392 DPPA3Q6W0C5 159 aa18.86■□□□□ 0.61
CLPTM1-201ENST00000337392 METTL1Q9UBP6 276 aaKnown RBP18.86■□□□□ 0.61
CLPTM1-201ENST00000337392 E7EUB6 86 aa18.85■□□□□ 0.61
CLPTM1-201ENST00000337392 CASP6P55212 293 aa18.85■□□□□ 0.61
CLPTM1-201ENST00000337392 KHDC3LQ587J8 217 aa18.85■□□□□ 0.61
CLPTM1-201ENST00000337392 TRAV1-1A0A0B4J248 108 aa18.85■□□□□ 0.61
CLPTM1-201ENST00000337392 C1orf196B1AJZ1 125 aa18.85■□□□□ 0.61
CLPTM1-201ENST00000337392 RBFOX2O43251 390 aaKnown RBP eCLIP18.85■□□□□ 0.61
CLPTM1-201ENST00000337392 C1QTNF9P0C862 333 aa18.85■□□□□ 0.61
CLPTM1-201ENST00000337392 CD81P60033 236 aa18.85■□□□□ 0.61
CLPTM1-201ENST00000337392 UBE2G2P60604 165 aa18.85■□□□□ 0.61
CLPTM1-201ENST00000337392 GNB2P62879 340 aa18.85■□□□□ 0.61
CLPTM1-201ENST00000337392 HIPK2Q9H2X6 1198 aa18.85■□□□□ 0.61
CLPTM1-201ENST00000337392 CHRNB4P30926 498 aa18.84■□□□□ 0.61
CLPTM1-201ENST00000337392 ZNF709Q8N972 641 aa18.84■□□□□ 0.61
CLPTM1-201ENST00000337392 RITA1Q96K30 269 aa18.84■□□□□ 0.61
CLPTM1-201ENST00000337392 SSX3Q99909 188 aa18.84■□□□□ 0.61
CLPTM1-201ENST00000337392 OR2C1O95371 312 aa18.84■□□□□ 0.61
CLPTM1-201ENST00000337392 CA2P00918 260 aa18.84■□□□□ 0.61
CLPTM1-201ENST00000337392 LOXP28300 417 aaPredicted RBP18.84■□□□□ 0.61
CLPTM1-201ENST00000337392 THBS3P49746 956 aa18.84■□□□□ 0.61
CLPTM1-201ENST00000337392 ARSJQ5FYB0 599 aaPredicted RBP18.84■□□□□ 0.61
CLPTM1-201ENST00000337392 RPUSD4Q96CM3 377 aaKnown RBP18.84■□□□□ 0.61
CLPTM1-201ENST00000337392 MGST2Q99735 147 aa18.84■□□□□ 0.61
CLPTM1-201ENST00000337392 NIPSNAP3BQ9BS92 247 aa18.84■□□□□ 0.61
CLPTM1-201ENST00000337392 PRSS46E5RG02 174 aa18.83■□□□□ 0.61
CLPTM1-201ENST00000337392 CD3EP07766 207 aa18.83■□□□□ 0.61
CLPTM1-201ENST00000337392 SAA1P0DJI8 122 aaPredicted RBP18.83■□□□□ 0.61
CLPTM1-201ENST00000337392 C10orf55Q5SWW7 151 aa18.83■□□□□ 0.61
CLPTM1-201ENST00000337392 CORO2AQ92828 525 aa18.83■□□□□ 0.61
CLPTM1-201ENST00000337392 GGACTQ9BVM4 153 aa18.83■□□□□ 0.61
CLPTM1-201ENST00000337392 OR51B2Q9Y5P1 312 aa18.83■□□□□ 0.61
CLPTM1-201ENST00000337392 IGHV1-69-2A0A0G2JMI3 117 aa18.83■□□□□ 0.6
CLPTM1-201ENST00000337392 NDUFB3O43676 98 aa18.83■□□□□ 0.6
CLPTM1-201ENST00000337392 IGHV3-48P01763 117 aa18.83■□□□□ 0.6
CLPTM1-201ENST00000337392 PAX6P26367 422 aa18.83■□□□□ 0.6
CLPTM1-201ENST00000337392 ADORA2A-AS1P86434 159 aa18.83■□□□□ 0.6
CLPTM1-201ENST00000337392 PPP1R14DQ9NXH3 145 aa18.83■□□□□ 0.6
CLPTM1-201ENST00000337392 MDKP21741 143 aaPredicted RBP18.82■□□□□ 0.6
CLPTM1-201ENST00000337392 VWC2Q2TAL6 325 aa18.82■□□□□ 0.6
CLPTM1-201ENST00000337392 CYB5R2Q6BCY4 276 aa18.82■□□□□ 0.6
CLPTM1-201ENST00000337392 C15orf54Q8N8G6 183 aa18.82■□□□□ 0.6
CLPTM1-201ENST00000337392 TMEM14BQ9NUH8 114 aa18.82■□□□□ 0.6
CLPTM1-201ENST00000337392 CA7P43166 264 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms