RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 NUDT15Q9NV35 164 aa12.09□□□□□ -0.47
SEC13-201ENST00000337354 SHPKQ9UHJ6 478 aa12.09□□□□□ -0.47
SEC13-201ENST00000337354 LINC00527Q9UJ94 153 aa12.09□□□□□ -0.47
SEC13-201ENST00000337354 DUXBA0A1W2PPF3 345 aa12.08□□□□□ -0.48
SEC13-201ENST00000337354 C9orf170A2RU37 121 aa12.08□□□□□ -0.48
SEC13-201ENST00000337354 IGKV1-5P01602 117 aa12.08□□□□□ -0.48
SEC13-201ENST00000337354 ANXA7P20073 488 aaKnown RBP12.08□□□□□ -0.48
SEC13-201ENST00000337354 PPIFP30405 207 aaKnown RBP12.08□□□□□ -0.48
SEC13-201ENST00000337354 TEX38Q6PEX7 206 aa12.08□□□□□ -0.48
SEC13-201ENST00000337354 SHISA2Q6UWI4 295 aa12.08□□□□□ -0.48
SEC13-201ENST00000337354 NRARPQ7Z6K4 114 aa12.08□□□□□ -0.48
SEC13-201ENST00000337354 MINDY2Q8NBR6 621 aa12.08□□□□□ -0.48
SEC13-201ENST00000337354 LFNGQ8NES3 379 aa12.08□□□□□ -0.48
SEC13-201ENST00000337354 OR4X2Q8NGF9 303 aa12.08□□□□□ -0.48
SEC13-201ENST00000337354 OR5B3Q8NH48 314 aa12.08□□□□□ -0.48
SEC13-201ENST00000337354 OR4A16Q8NH70 328 aa12.08□□□□□ -0.48
SEC13-201ENST00000337354 GRPEL2Q8TAA5 225 aa12.08□□□□□ -0.48
SEC13-201ENST00000337354 LHFPL5Q8TAF8 219 aa12.08□□□□□ -0.48
SEC13-201ENST00000337354 SRSF8Q9BRL6 282 aaKnown RBP12.08□□□□□ -0.48
SEC13-201ENST00000337354 CACFD1Q9UGQ2 172 aa12.08□□□□□ -0.48
SEC13-201ENST00000337354 FBXO7Q9Y3I1 522 aa12.08□□□□□ -0.48
SEC13-201ENST00000337354 WSB1Q9Y6I7 421 aa12.08□□□□□ -0.48
SEC13-201ENST00000337354 TRAV6A0A075B6T7 132 aa12.07□□□□□ -0.48
SEC13-201ENST00000337354 TRAV3A0A0B4J244 114 aa12.07□□□□□ -0.48
SEC13-201ENST00000337354 DUS4LO95620 317 aaKnown RBP12.07□□□□□ -0.48
SEC13-201ENST00000337354 IGHG4P01861 327 aa12.07□□□□□ -0.48
SEC13-201ENST00000337354 HLA-AP01891 365 aaKnown RBP12.07□□□□□ -0.48
SEC13-201ENST00000337354 ELANEP08246 267 aa12.07□□□□□ -0.48
SEC13-201ENST00000337354 P0C879 139 aa12.07□□□□□ -0.48
SEC13-201ENST00000337354 RPL27AP46776 148 aaKnown RBP12.07□□□□□ -0.48
SEC13-201ENST00000337354 CFHR3Q02985 330 aa12.07□□□□□ -0.48
SEC13-201ENST00000337354 DHRS2Q13268 280 aa12.07□□□□□ -0.48
SEC13-201ENST00000337354 C19orf54Q5BKX5 351 aa12.07□□□□□ -0.48
SEC13-201ENST00000337354 THOC7Q6I9Y2 204 aaKnown RBP12.07□□□□□ -0.48
SEC13-201ENST00000337354 PLET1Q6UQ28 207 aa12.07□□□□□ -0.48
SEC13-201ENST00000337354 UNQ5815/PRO19632Q6UWF5 114 aa12.07□□□□□ -0.48
SEC13-201ENST00000337354 LYG2Q86SG7 212 aa12.07□□□□□ -0.48
SEC13-201ENST00000337354 ZNF429Q86V71 674 aa12.07□□□□□ -0.48
SEC13-201ENST00000337354 OR5M8Q8NGP6 311 aa12.07□□□□□ -0.48
SEC13-201ENST00000337354 COQ8AQ8NI60 647 aa12.07□□□□□ -0.48
SEC13-201ENST00000337354 RNASE11Q8TAA1 199 aaKnown RBP12.07□□□□□ -0.48
SEC13-201ENST00000337354 PHB2Q99623 299 aa12.07□□□□□ -0.48
SEC13-201ENST00000337354 FAM103A1Q9BTL3 118 aaKnown RBP12.07□□□□□ -0.48
SEC13-201ENST00000337354 TMEM14BQ9NUH8 114 aa12.07□□□□□ -0.48
SEC13-201ENST00000337354 ZNF257Q9Y2Q1 563 aa12.07□□□□□ -0.48
SEC13-201ENST00000337354 C15orf61A6NNL5 157 aa12.06□□□□□ -0.48
SEC13-201ENST00000337354 G3V318 75 aa12.06□□□□□ -0.48
SEC13-201ENST00000337354 OR9G9P0C7N8 305 aa12.06□□□□□ -0.48
SEC13-201ENST00000337354 DCTN2Q13561 401 aaKnown RBP12.06□□□□□ -0.48
SEC13-201ENST00000337354 HSD17B13Q7Z5P4 300 aaPredicted RBP12.06□□□□□ -0.48
SEC13-201ENST00000337354 ZNF329Q86UD4 541 aa12.06□□□□□ -0.48
SEC13-201ENST00000337354 SLC35G3Q8N808 338 aa12.06□□□□□ -0.48
SEC13-201ENST00000337354 OR1L8Q8NGR8 309 aa12.06□□□□□ -0.48
SEC13-201ENST00000337354 CASTOR1Q8WTX7 329 aa12.06□□□□□ -0.48
SEC13-201ENST00000337354 CITED1Q99966 193 aa12.06□□□□□ -0.48
SEC13-201ENST00000337354 FOXA2Q9Y261 457 aaPredicted RBP12.06□□□□□ -0.48
SEC13-201ENST00000337354 OR51B2Q9Y5P1 312 aa12.06□□□□□ -0.48
SEC13-201ENST00000337354 A0A0B4J293 547 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 TEX50A0A1B0GTY4 177 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 RBMXL2O75526 392 aaKnown RBP12.05□□□□□ -0.48
SEC13-201ENST00000337354 BRI3O95415 125 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 IL5P05113 134 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 OR2B8PP59922 312 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 FOXE3Q13461 319 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 ECSCRQ19T08 205 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 ANKRD55Q3KP44 614 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 MARVELD1Q9BSK0 173 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 QTRT1Q9BXR0 403 aaKnown RBP12.05□□□□□ -0.48
SEC13-201ENST00000337354 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.05□□□□□ -0.48
SEC13-201ENST00000337354 NSG2Q9Y328 171 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 TMED3Q9Y3Q3 217 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 A0A1W2PN81 502 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 E7EUB6 86 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 H3BUA1 57 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 FBXO24O75426 580 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 PTTG1O95997 202 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 IGLV1-40P01703 118 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 OPN1MWP04001 364 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 TRAPPC2P0DI81 140 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 TRAPPC2BP0DI82 140 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 OPN1MW2P0DN77 364 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 OPN1MW3P0DN78 364 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 CHRNA7P36544 502 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 KRTAP10-3P60369 221 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 HSPE1P61604 102 aaKnown RBP12.05□□□□□ -0.48
SEC13-201ENST00000337354 CD83Q01151 205 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 C10orf55Q5SWW7 151 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 LYZL2Q7Z4W2 148 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 TTC9CQ8N5M4 171 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 RNF152Q8N8N0 203 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 MITD1Q8WV92 249 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 GPR146Q96CH1 333 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 FYTTD1Q96QD9 318 aaKnown RBP12.05□□□□□ -0.48
SEC13-201ENST00000337354 NDUFA4L2Q9NRX3 87 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 ZFP57Q9NU63 452 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 COA4Q9NYJ1 87 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 PRR13Q9NZ81 148 aa12.05□□□□□ -0.48
SEC13-201ENST00000337354 A0A0G2JRQ6 117 aa12.04□□□□□ -0.48
SEC13-201ENST00000337354 A0A1B0GU03 582 aa12.04□□□□□ -0.48
SEC13-201ENST00000337354 TEX22C9J3V5 150 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms