RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 SPCS1Q9Y6A9 102 aa11.21□□□□□ -0.61
COL2A1-201ENST00000337299 C6orf15Q6UXA7 325 aaPredicted RBP11.21□□□□□ -0.61
COL2A1-201ENST00000337299 STPG3Q8N7X2 389 aa11.21□□□□□ -0.61
COL2A1-201ENST00000337299 TMEM116Q8NCL8 245 aa11.21□□□□□ -0.61
COL2A1-201ENST00000337299 OR2Z1Q8NG97 314 aa11.21□□□□□ -0.61
COL2A1-201ENST00000337299 TWSG1Q9GZX9 223 aa11.21□□□□□ -0.61
COL2A1-201ENST00000337299 C7orf71A4D174 169 aa11.21□□□□□ -0.62
COL2A1-201ENST00000337299 TIMP3P35625 211 aa11.21□□□□□ -0.62
COL2A1-201ENST00000337299 PKDREJQ9NTG1 2253 aa11.21□□□□□ -0.62
COL2A1-201ENST00000337299 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.21□□□□□ -0.62
COL2A1-201ENST00000337299 H3BVH4 76 aa11.21□□□□□ -0.62
COL2A1-201ENST00000337299 HYPMO75409 117 aa11.21□□□□□ -0.62
COL2A1-201ENST00000337299 CNIH1O95406 144 aa11.21□□□□□ -0.62
COL2A1-201ENST00000337299 KCNMB1Q16558 191 aa11.21□□□□□ -0.62
COL2A1-201ENST00000337299 GUCD1Q96NT3 240 aa11.21□□□□□ -0.62
COL2A1-201ENST00000337299 MRPL13Q9BYD1 178 aaKnown RBP11.21□□□□□ -0.62
COL2A1-201ENST00000337299 IL36GQ9NZH8 169 aa11.21□□□□□ -0.62
COL2A1-201ENST00000337299 NOTCH3Q9UM47 2321 aa11.2□□□□□ -0.62
COL2A1-201ENST00000337299 hDV102S1A0JD36 115 aa11.2□□□□□ -0.62
COL2A1-201ENST00000337299 C17orf98A8MV24 154 aa11.2□□□□□ -0.62
COL2A1-201ENST00000337299 FAM90A26D6RGX4 464 aa11.2□□□□□ -0.62
COL2A1-201ENST00000337299 MPDU1O75352 247 aa11.2□□□□□ -0.62
COL2A1-201ENST00000337299 TNFSF15O95150 251 aa11.2□□□□□ -0.62
COL2A1-201ENST00000337299 MZT1Q08AG7 82 aa11.2□□□□□ -0.62
COL2A1-201ENST00000337299 IL15RAQ13261 267 aa11.2□□□□□ -0.62
COL2A1-201ENST00000337299 OR4S2Q8NH73 311 aa11.2□□□□□ -0.62
COL2A1-201ENST00000337299 CST9LQ9H4G1 147 aa11.2□□□□□ -0.62
COL2A1-201ENST00000337299 OOEPA6NGQ2 149 aa11.2□□□□□ -0.62
COL2A1-201ENST00000337299 CEACAM18A8MTB9 384 aa11.2□□□□□ -0.62
COL2A1-201ENST00000337299 IFI6P09912 130 aa11.2□□□□□ -0.62
COL2A1-201ENST00000337299 NMSQ5H8A3 153 aa11.2□□□□□ -0.62
COL2A1-201ENST00000337299 OR10X1Q8NGY0 326 aa11.2□□□□□ -0.62
COL2A1-201ENST00000337299 LRRC29Q8WV35 223 aa11.2□□□□□ -0.62
COL2A1-201ENST00000337299 GTSF1LQ9H1H1 148 aa11.2□□□□□ -0.62
COL2A1-201ENST00000337299 THYN1Q9P016 225 aa11.2□□□□□ -0.62
COL2A1-201ENST00000337299 AMMECR1Q9Y4X0 333 aaPredicted RBP11.2□□□□□ -0.62
COL2A1-201ENST00000337299 A0A087X0K7 114 aa11.2□□□□□ -0.62
COL2A1-201ENST00000337299 GAGE12BA1L429 117 aa11.2□□□□□ -0.62
COL2A1-201ENST00000337299 NKX6-3A6NJ46 265 aa11.2□□□□□ -0.62
COL2A1-201ENST00000337299 A8MWL6 223 aa11.2□□□□□ -0.62
COL2A1-201ENST00000337299 J3QR06 171 aa11.2□□□□□ -0.62
COL2A1-201ENST00000337299 KLF7O75840 302 aaPredicted RBP11.2□□□□□ -0.62
COL2A1-201ENST00000337299 LYZL6O75951 148 aa11.2□□□□□ -0.62
COL2A1-201ENST00000337299 CSRP1P21291 193 aaKnown RBP11.2□□□□□ -0.62
COL2A1-201ENST00000337299 OCIAD2Q56VL3 154 aa11.2□□□□□ -0.62
COL2A1-201ENST00000337299 Q6ZRM9 215 aa11.2□□□□□ -0.62
COL2A1-201ENST00000337299 FLVCR1-AS1Q8TAF5 88 aa11.2□□□□□ -0.62
COL2A1-201ENST00000337299 RNF166Q96A37 237 aaPredicted RBP11.2□□□□□ -0.62
COL2A1-201ENST00000337299 PAXXQ9BUH6 204 aa11.2□□□□□ -0.62
COL2A1-201ENST00000337299 GPX1P07203 203 aa11.19□□□□□ -0.62
COL2A1-201ENST00000337299 CD46P15529 392 aa11.19□□□□□ -0.62
COL2A1-201ENST00000337299 GAGE1Q13065 139 aa11.19□□□□□ -0.62
COL2A1-201ENST00000337299 TMEM177Q53S58 311 aa11.19□□□□□ -0.62
COL2A1-201ENST00000337299 SLC25A45Q8N413 288 aa11.19□□□□□ -0.62
COL2A1-201ENST00000337299 PLSCR2Q9NRY7 297 aa11.19□□□□□ -0.62
COL2A1-201ENST00000337299 HELZP42694 1942 aaKnown RBP11.19□□□□□ -0.62
COL2A1-201ENST00000337299 OR2T8A6NH00 312 aa11.19□□□□□ -0.62
COL2A1-201ENST00000337299 FAM157AC9JC47 383 aa11.19□□□□□ -0.62
COL2A1-201ENST00000337299 ITGB1BP1O14713 200 aa11.19□□□□□ -0.62
COL2A1-201ENST00000337299 RBP4P02753 201 aa11.19□□□□□ -0.62
COL2A1-201ENST00000337299 MRPS11P82912 194 aaKnown RBP11.19□□□□□ -0.62
COL2A1-201ENST00000337299 WFDC3Q8IUB2 231 aa11.19□□□□□ -0.62
COL2A1-201ENST00000337299 RND1Q92730 232 aa11.19□□□□□ -0.62
COL2A1-201ENST00000337299 NABP2Q9BQ15 211 aa11.19□□□□□ -0.62
COL2A1-201ENST00000337299 MS4A5Q9H3V2 200 aa11.19□□□□□ -0.62
COL2A1-201ENST00000337299 VWA8A3KMH1 1905 aa11.19□□□□□ -0.62
COL2A1-201ENST00000337299 IGKV1-27A0A075B6S5 117 aa11.19□□□□□ -0.62
COL2A1-201ENST00000337299 MUC21A0A0G2JKD1 596 aa11.19□□□□□ -0.62
COL2A1-201ENST00000337299 MUC21A0A140T8X8 626 aa11.19□□□□□ -0.62
COL2A1-201ENST00000337299 RAMP3O60896 148 aa11.19□□□□□ -0.62
COL2A1-201ENST00000337299 CYC1P08574 325 aa11.19□□□□□ -0.62
COL2A1-201ENST00000337299 TDGF1P13385 188 aa11.19□□□□□ -0.62
COL2A1-201ENST00000337299 MUC21Q5SSG8 566 aa11.19□□□□□ -0.62
COL2A1-201ENST00000337299 LYPD6BQ8NI32 183 aa11.19□□□□□ -0.62
COL2A1-201ENST00000337299 LEAP2Q969E1 77 aa11.19□□□□□ -0.62
COL2A1-201ENST00000337299 NUPR1O60356 82 aa11.18□□□□□ -0.62
COL2A1-201ENST00000337299 IL6RP08887 468 aaPredicted RBP11.18□□□□□ -0.62
COL2A1-201ENST00000337299 SELENOTP62341 195 aa11.18□□□□□ -0.62
COL2A1-201ENST00000337299 C10orf113Q5VZT2 155 aa11.18□□□□□ -0.62
COL2A1-201ENST00000337299 EAF1Q96JC9 268 aaPredicted RBP11.18□□□□□ -0.62
COL2A1-201ENST00000337299 MED13LQ71F56 2210 aa11.18□□□□□ -0.62
COL2A1-201ENST00000337299 PGPA6NDG6 321 aa11.18□□□□□ -0.62
COL2A1-201ENST00000337299 CCL25O15444 150 aa11.18□□□□□ -0.62
COL2A1-201ENST00000337299 SPRY3O43610 288 aa11.18□□□□□ -0.62
COL2A1-201ENST00000337299 SCGB2A1O75556 95 aa11.18□□□□□ -0.62
COL2A1-201ENST00000337299 LINC00271P0C7V0 271 aa11.18□□□□□ -0.62
COL2A1-201ENST00000337299 CTSSP25774 331 aa11.18□□□□□ -0.62
COL2A1-201ENST00000337299 GPR183P32249 361 aa11.18□□□□□ -0.62
COL2A1-201ENST00000337299 PRNTQ86SH4 94 aa11.18□□□□□ -0.62
COL2A1-201ENST00000337299 WFDC8Q8IUA0 241 aa11.18□□□□□ -0.62
COL2A1-201ENST00000337299 C1orf147Q96MC9 270 aaPredicted RBP11.18□□□□□ -0.62
COL2A1-201ENST00000337299 CREBBPQ92793 2442 aa11.18□□□□□ -0.62
COL2A1-201ENST00000337299 LYZP61626 148 aa11.18□□□□□ -0.62
COL2A1-201ENST00000337299 FOXL1Q12952 345 aa11.18□□□□□ -0.62
COL2A1-201ENST00000337299 ZNF726P1Q15940 193 aa11.18□□□□□ -0.62
COL2A1-201ENST00000337299 Q1RN00 199 aa11.18□□□□□ -0.62
COL2A1-201ENST00000337299 MIR17HGQ75NE6 70 aa11.18□□□□□ -0.62
COL2A1-201ENST00000337299 LOC107984156A0A0G2JMH3 177 aa11.18□□□□□ -0.62
COL2A1-201ENST00000337299 E9PLN8 166 aa11.18□□□□□ -0.62
COL2A1-201ENST00000337299 CLDN14O95500 239 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms