RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 IDI2-AS1Q9NZ38 188 aa10.32□□□□□ -0.76
LIMK1-201ENST00000336180 DSCAML1Q8TD84 2053 aa10.32□□□□□ -0.76
LIMK1-201ENST00000336180 NAV3Q8IVL0 2385 aa10.31□□□□□ -0.76
LIMK1-201ENST00000336180 VSTM5A8MXK1 200 aa10.31□□□□□ -0.76
LIMK1-201ENST00000336180 YPEL1O60688 119 aa10.31□□□□□ -0.76
LIMK1-201ENST00000336180 NDUFS7O75251 213 aa10.31□□□□□ -0.76
LIMK1-201ENST00000336180 CGB3P0DN86 165 aa10.31□□□□□ -0.76
LIMK1-201ENST00000336180 CGB7P0DN87 165 aa10.31□□□□□ -0.76
LIMK1-201ENST00000336180 FGF7P21781 194 aa10.31□□□□□ -0.76
LIMK1-201ENST00000336180 CA7P43166 264 aa10.31□□□□□ -0.76
LIMK1-201ENST00000336180 DVL1P1P54792 670 aaPredicted RBP10.31□□□□□ -0.76
LIMK1-201ENST00000336180 TAS2R30P59541 319 aa10.31□□□□□ -0.76
LIMK1-201ENST00000336180 YPEL2Q96QA6 119 aa10.31□□□□□ -0.76
LIMK1-201ENST00000336180 MRPL20Q9BYC9 149 aaKnown RBP10.31□□□□□ -0.76
LIMK1-201ENST00000336180 HSPB7Q9UBY9 170 aa10.31□□□□□ -0.76
LIMK1-201ENST00000336180 STRAPQ9Y3F4 350 aaKnown RBP10.31□□□□□ -0.76
LIMK1-201ENST00000336180 NKX6-3A6NJ46 265 aa10.31□□□□□ -0.76
LIMK1-201ENST00000336180 UMAD1C9J7I0 102 aa10.31□□□□□ -0.76
LIMK1-201ENST00000336180 CD5P06127 495 aa10.31□□□□□ -0.76
LIMK1-201ENST00000336180 UQCC3Q6UW78 93 aa10.31□□□□□ -0.76
LIMK1-201ENST00000336180 MUC15Q8N387 334 aa10.31□□□□□ -0.76
LIMK1-201ENST00000336180 FAM222BQ8WU58 562 aa10.31□□□□□ -0.76
LIMK1-201ENST00000336180 SCRT1Q9BWW7 348 aa10.31□□□□□ -0.76
LIMK1-201ENST00000336180 C22orf46C9J442 243 aa10.31□□□□□ -0.76
LIMK1-201ENST00000336180 F2RL2O00254 374 aa10.31□□□□□ -0.76
LIMK1-201ENST00000336180 MLANAQ16655 118 aa10.31□□□□□ -0.76
LIMK1-201ENST00000336180 ACSM6Q6P461 480 aa10.31□□□□□ -0.76
LIMK1-201ENST00000336180 C1orf174Q8IYL3 243 aa10.31□□□□□ -0.76
LIMK1-201ENST00000336180 MYO18BQ8IUG5 2567 aa10.31□□□□□ -0.76
LIMK1-201ENST00000336180 TRAV38-1A0A0B4J264 116 aa10.3□□□□□ -0.76
LIMK1-201ENST00000336180 IGHV1-69-2A0A0G2JMI3 117 aa10.3□□□□□ -0.76
LIMK1-201ENST00000336180 FAM157AC9JC47 383 aa10.3□□□□□ -0.76
LIMK1-201ENST00000336180 P0C879 139 aa10.3□□□□□ -0.76
LIMK1-201ENST00000336180 COX7A1P24310 79 aa10.3□□□□□ -0.76
LIMK1-201ENST00000336180 ERVK-16P61578 105 aa10.3□□□□□ -0.76
LIMK1-201ENST00000336180 KIAA0141Q14154 515 aaPredicted RBP10.3□□□□□ -0.76
LIMK1-201ENST00000336180 C10orf55Q5SWW7 151 aa10.3□□□□□ -0.76
LIMK1-201ENST00000336180 ZNF66Q6ZN08 573 aa10.3□□□□□ -0.76
LIMK1-201ENST00000336180 TMEM204Q9BSN7 226 aa10.3□□□□□ -0.76
LIMK1-201ENST00000336180 TOLLIPQ9H0E2 274 aa10.3□□□□□ -0.76
LIMK1-201ENST00000336180 IGSF10Q6WRI0 2623 aa10.3□□□□□ -0.76
LIMK1-201ENST00000336180 ZNF727A8MUV8 499 aa10.3□□□□□ -0.76
LIMK1-201ENST00000336180 OR8U8P0C7N1 319 aa10.3□□□□□ -0.76
LIMK1-201ENST00000336180 GAMTQ14353 236 aa10.3□□□□□ -0.76
LIMK1-201ENST00000336180 AWAT1Q58HT5 328 aa10.3□□□□□ -0.76
LIMK1-201ENST00000336180 OR4A47Q6IF82 309 aa10.3□□□□□ -0.76
LIMK1-201ENST00000336180 C19orf35Q6ZS72 473 aa10.3□□□□□ -0.76
LIMK1-201ENST00000336180 ZBTB34Q8NCN2 500 aa10.3□□□□□ -0.76
LIMK1-201ENST00000336180 SSMEM1Q8WWF3 244 aa10.3□□□□□ -0.76
LIMK1-201ENST00000336180 CLCC1Q96S66 551 aa10.3□□□□□ -0.76
LIMK1-201ENST00000336180 PATZ1Q9HBE1 687 aaKnown RBP10.3□□□□□ -0.76
LIMK1-201ENST00000336180 TANC2Q9HCD6 1990 aa10.3□□□□□ -0.76
LIMK1-201ENST00000336180 CBY3A6NI87 242 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 TMEM238C9JI98 176 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 NDUFB3O43676 98 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 ENSAO43768 121 aaKnown RBP10.29□□□□□ -0.76
LIMK1-201ENST00000336180 WNT2P09544 360 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 CT45A6P0DMU7 189 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 CT45A5P0DMU8 189 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 CT45A7P0DMV0 189 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 CHRNB4P30926 498 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 HBG1P69891 147 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 HBG2P69892 147 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 ODF1Q14990 250 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 RNF151Q2KHN1 245 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 CYB561D1Q8N8Q1 229 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 SLC24A4Q8NFF2 622 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 OR10P1Q8NGE3 313 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 OR10W1Q8NGF6 305 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 TAF15Q92804 592 aaKnown RBP eCLIP10.29□□□□□ -0.76
LIMK1-201ENST00000336180 RITA1Q96K30 269 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 WDR61Q9GZS3 305 aaKnown RBP10.29□□□□□ -0.76
LIMK1-201ENST00000336180 hADV38S2A0JD32 116 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 C15orf62A8K5M9 175 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 RAB29O14966 203 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 RCC1LQ96I51 464 aaKnown RBP10.29□□□□□ -0.76
LIMK1-201ENST00000336180 A0A1W2PPE2 198 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 RBFOX3A6NFN3 312 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 DFFBO76075 338 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 HPRT1P00492 218 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 LGALS4P56470 323 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 TMEM14EPQ6UXP3 125 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 OR10X1Q8NGY0 326 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 ZNF714Q96N38 554 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 NGBQ9NPG2 151 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 SLC35D1Q9NTN3 355 aa10.29□□□□□ -0.76
LIMK1-201ENST00000336180 METTL1Q9UBP6 276 aaKnown RBP10.29□□□□□ -0.76
LIMK1-201ENST00000336180 CD24P25063 80 aa10.28□□□□□ -0.76
LIMK1-201ENST00000336180 APOBEC3AP31941 199 aaPredicted RBP10.28□□□□□ -0.76
LIMK1-201ENST00000336180 ZNF787Q6DD87 383 aa10.28□□□□□ -0.76
LIMK1-201ENST00000336180 GNPNAT1Q96EK6 184 aaPredicted RBP10.28□□□□□ -0.76
LIMK1-201ENST00000336180 SEC11CQ9BY50 192 aa10.28□□□□□ -0.76
LIMK1-201ENST00000336180 RPUSD1Q9UJJ7 312 aaKnown RBP10.28□□□□□ -0.76
LIMK1-201ENST00000336180 LAMP3Q9UQV4 416 aa10.28□□□□□ -0.76
LIMK1-201ENST00000336180 URGCP-MRPS24S4R325 110 aa10.28□□□□□ -0.76
LIMK1-201ENST00000336180 A6NNC1 897 aa10.28□□□□□ -0.76
LIMK1-201ENST00000336180 TSTD3H0UI37 97 aa10.28□□□□□ -0.76
LIMK1-201ENST00000336180 CDKN1AP38936 164 aa10.28□□□□□ -0.76
LIMK1-201ENST00000336180 RELBQ01201 579 aa10.28□□□□□ -0.76
LIMK1-201ENST00000336180 LRRC75BQ2VPJ9 315 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms