RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 NLRC5Q86WI3 1866 aa12.59□□□□□ -0.39
C9orf47-201ENST00000334490 HIST1H1BP16401 226 aaKnown RBP12.59□□□□□ -0.39
C9orf47-201ENST00000334490 RPL7P18124 248 aaKnown RBP12.59□□□□□ -0.39
C9orf47-201ENST00000334490 ZNF880Q6PDB4 577 aa12.59□□□□□ -0.39
C9orf47-201ENST00000334490 OR51G1Q8NGK1 321 aa12.59□□□□□ -0.39
C9orf47-201ENST00000334490 ANAPC16Q96DE5 110 aa12.59□□□□□ -0.39
C9orf47-201ENST00000334490 IL4P05112 153 aa12.58□□□□□ -0.4
C9orf47-201ENST00000334490 UCP1P25874 307 aa12.58□□□□□ -0.4
C9orf47-201ENST00000334490 SULT1A2P50226 295 aa12.58□□□□□ -0.4
C9orf47-201ENST00000334490 RELQ04864 619 aaPredicted RBP12.58□□□□□ -0.4
C9orf47-201ENST00000334490 SPANXN1Q5VSR9 72 aa12.58□□□□□ -0.4
C9orf47-201ENST00000334490 PLXNA4Q9HCM2 1894 aa12.58□□□□□ -0.4
C9orf47-201ENST00000334490 IGHV3OR16-12A0A075B7B8 117 aa12.58□□□□□ -0.4
C9orf47-201ENST00000334490 MFSD2BA6NFX1 497 aa12.58□□□□□ -0.4
C9orf47-201ENST00000334490 ATP5IP56385 69 aaPredicted RBP12.58□□□□□ -0.4
C9orf47-201ENST00000334490 MBNL2Q5VZF2 373 aaKnown RBP12.58□□□□□ -0.4
C9orf47-201ENST00000334490 AQP10Q96PS8 301 aa12.58□□□□□ -0.4
C9orf47-201ENST00000334490 ANAPC1Q9H1A4 1944 aa12.58□□□□□ -0.4
C9orf47-201ENST00000334490 MGPP08493 103 aa12.58□□□□□ -0.4
C9orf47-201ENST00000334490 C8orf88P0DMB2 117 aa12.58□□□□□ -0.4
C9orf47-201ENST00000334490 AMTP48728 403 aa12.58□□□□□ -0.4
C9orf47-201ENST00000334490 EFNB1P98172 346 aa12.58□□□□□ -0.4
C9orf47-201ENST00000334490 TUSC1Q2TAM9 212 aa12.58□□□□□ -0.4
C9orf47-201ENST00000334490 TMPRSS5Q9H3S3 457 aa12.58□□□□□ -0.4
C9orf47-201ENST00000334490 TSC2P49815 1807 aa12.58□□□□□ -0.4
C9orf47-201ENST00000334490 SRRM5B3KS81 715 aa12.58□□□□□ -0.4
C9orf47-201ENST00000334490 H3BQ15 152 aa12.58□□□□□ -0.4
C9orf47-201ENST00000334490 SIGLEC5O15389 551 aa12.58□□□□□ -0.4
C9orf47-201ENST00000334490 EIF3GO75821 320 aaKnown RBP eCLIP12.58□□□□□ -0.4
C9orf47-201ENST00000334490 PPP1R27Q86WC6 154 aa12.58□□□□□ -0.4
C9orf47-201ENST00000334490 RAB24Q969Q5 203 aa12.58□□□□□ -0.4
C9orf47-201ENST00000334490 FBLN5Q9UBX5 448 aa12.58□□□□□ -0.4
C9orf47-201ENST00000334490 TRBV6-7A0A0A0MS04 114 aa12.57□□□□□ -0.4
C9orf47-201ENST00000334490 ACAA1P09110 424 aaPredicted RBP12.57□□□□□ -0.4
C9orf47-201ENST00000334490 CD24P25063 80 aa12.57□□□□□ -0.4
C9orf47-201ENST00000334490 KIAA2026Q5HYC2 2103 aa12.57□□□□□ -0.4
C9orf47-201ENST00000334490 GALNT14Q96FL9 552 aa12.57□□□□□ -0.4
C9orf47-201ENST00000334490 FBXL7Q9UJT9 491 aa12.57□□□□□ -0.4
C9orf47-201ENST00000334490 H3BTX0 84 aa12.57□□□□□ -0.4
C9orf47-201ENST00000334490 ISOC2Q96AB3 205 aa12.57□□□□□ -0.4
C9orf47-201ENST00000334490 SEC11CQ9BY50 192 aa12.57□□□□□ -0.4
C9orf47-201ENST00000334490 YPEL1O60688 119 aa12.57□□□□□ -0.4
C9orf47-201ENST00000334490 C20orf204Q6ZNR8 217 aa12.57□□□□□ -0.4
C9orf47-201ENST00000334490 YPEL2Q96QA6 119 aa12.57□□□□□ -0.4
C9orf47-201ENST00000334490 C7orf77A4D0Y5 90 aa12.57□□□□□ -0.4
C9orf47-201ENST00000334490 NDUFB4O95168 129 aa12.57□□□□□ -0.4
C9orf47-201ENST00000334490 IGHV3-23P01764 117 aa12.57□□□□□ -0.4
C9orf47-201ENST00000334490 SELLP14151 372 aa12.57□□□□□ -0.4
C9orf47-201ENST00000334490 TCF15Q12870 199 aa12.57□□□□□ -0.4
C9orf47-201ENST00000334490 DDB2Q92466 427 aa12.57□□□□□ -0.4
C9orf47-201ENST00000334490 SAA2-SAA4A0A096LPE2 208 aa12.56□□□□□ -0.4
C9orf47-201ENST00000334490 IGKV1-12A0A0C4DH73 117 aa12.56□□□□□ -0.4
C9orf47-201ENST00000334490 IGKV1D-12P01611 117 aa12.56□□□□□ -0.4
C9orf47-201ENST00000334490 SAA2P0DJI9 122 aaPredicted RBP12.56□□□□□ -0.4
C9orf47-201ENST00000334490 RND3P61587 244 aa12.56□□□□□ -0.4
C9orf47-201ENST00000334490 DHRS11Q6UWP2 260 aa12.56□□□□□ -0.4
C9orf47-201ENST00000334490 ZNF497Q6ZNH5 498 aa12.56□□□□□ -0.4
C9orf47-201ENST00000334490 ARPC1AQ92747 370 aa12.56□□□□□ -0.4
C9orf47-201ENST00000334490 NABP2Q9BQ15 211 aa12.56□□□□□ -0.4
C9orf47-201ENST00000334490 A0A0G2JLM5 398 aa12.56□□□□□ -0.4
C9orf47-201ENST00000334490 IGHV3-49A0A0A0MS15 119 aa12.56□□□□□ -0.4
C9orf47-201ENST00000334490 MORN2Q502X0 79 aa12.56□□□□□ -0.4
C9orf47-201ENST00000334490 MSGN1A6NI15 193 aa12.55□□□□□ -0.4
C9orf47-201ENST00000334490 B4DEV8 164 aa12.55□□□□□ -0.4
C9orf47-201ENST00000334490 OR4X2Q8NGF9 303 aa12.55□□□□□ -0.4
C9orf47-201ENST00000334490 SDHCQ99643 169 aaPredicted RBP12.55□□□□□ -0.4
C9orf47-201ENST00000334490 ZNF253O75346 499 aa12.55□□□□□ -0.4
C9orf47-201ENST00000334490 F12P00748 615 aaPredicted RBP12.55□□□□□ -0.4
C9orf47-201ENST00000334490 RAB9AP51151 201 aa12.55□□□□□ -0.4
C9orf47-201ENST00000334490 MEF2BQ02080 365 aaPredicted RBP12.55□□□□□ -0.4
C9orf47-201ENST00000334490 GTF3AQ92664 365 aaKnown RBP12.55□□□□□ -0.4
C9orf47-201ENST00000334490 NPFFR1Q9GZQ6 430 aa12.55□□□□□ -0.4
C9orf47-201ENST00000334490 IGFL3Q6UXB1 125 aa12.55□□□□□ -0.4
C9orf47-201ENST00000334490 FAM89BQ8N5H3 189 aa12.55□□□□□ -0.4
C9orf47-201ENST00000334490 CYB561D1Q8N8Q1 229 aa12.55□□□□□ -0.4
C9orf47-201ENST00000334490 SLC25A28Q96A46 364 aa12.55□□□□□ -0.4
C9orf47-201ENST00000334490 TRAV40A0A0B4J280 105 aa12.55□□□□□ -0.4
C9orf47-201ENST00000334490 IGKV1D-13A0A0B4J2D9 117 aa12.55□□□□□ -0.4
C9orf47-201ENST00000334490 DPRXA6NFQ7 191 aa12.55□□□□□ -0.4
C9orf47-201ENST00000334490 OR5AL1P0C617 328 aa12.55□□□□□ -0.4
C9orf47-201ENST00000334490 IGKV1-13P0DP09 117 aa12.55□□□□□ -0.4
C9orf47-201ENST00000334490 COX19Q49B96 90 aa12.55□□□□□ -0.4
C9orf47-201ENST00000334490 OR51M1Q9H341 326 aa12.55□□□□□ -0.4
C9orf47-201ENST00000334490 METRNQ9UJH8 293 aa12.55□□□□□ -0.4
C9orf47-201ENST00000334490 FANCMQ8IYD8 2048 aa12.55□□□□□ -0.4
C9orf47-201ENST00000334490 TCAPO15273 167 aa12.54□□□□□ -0.4
C9orf47-201ENST00000334490 DSCR9P59020 149 aa12.54□□□□□ -0.4
C9orf47-201ENST00000334490 ZNF660Q6AZW8 331 aaPredicted RBP12.54□□□□□ -0.4
C9orf47-201ENST00000334490 COLCA1Q6ZS62 124 aa12.54□□□□□ -0.4
C9orf47-201ENST00000334490 GATAD1Q8WUU5 269 aa12.54□□□□□ -0.4
C9orf47-201ENST00000334490 RTBDNQ9BSG5 229 aaPredicted RBP12.54□□□□□ -0.4
C9orf47-201ENST00000334490 C21orf62Q9NYP8 219 aa12.54□□□□□ -0.4
C9orf47-201ENST00000334490 ELOA3CA0A087WX78 387 aaPredicted RBP12.54□□□□□ -0.4
C9orf47-201ENST00000334490 NBR2O15453 112 aa12.54□□□□□ -0.4
C9orf47-201ENST00000334490 Q5BKY6 102 aa12.54□□□□□ -0.4
C9orf47-201ENST00000334490 STPG2Q8N412 459 aa12.54□□□□□ -0.4
C9orf47-201ENST00000334490 DUX5Q96PT3 197 aa12.54□□□□□ -0.4
C9orf47-201ENST00000334490 TXNDC17Q9BRA2 123 aa12.54□□□□□ -0.4
C9orf47-201ENST00000334490 IFI27L2Q9H2X8 130 aa12.54□□□□□ -0.4
C9orf47-201ENST00000334490 HSPB7Q9UBY9 170 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms