RNA–Protein interactions for RNA: ENST00000334082.10

HOMER1-202, Transcript of homer scaffold protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOMER1, Length 5,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER1-202ENST00000334082 ATP5IP56385 69 aaPredicted RBP18.64■□□□□ 0.57
HOMER1-202ENST00000334082 NUP205Q92621 2012 aa18.64■□□□□ 0.57
HOMER1-202ENST00000334082 PTPRZ1P23471 2315 aaPredicted RBP18.63■□□□□ 0.57
HOMER1-202ENST00000334082 RP1L1Q8IWN7 2480 aaPredicted RBP18.63■□□□□ 0.57
HOMER1-202ENST00000334082 RPL23P62829 140 aaKnown RBP18.63■□□□□ 0.57
HOMER1-202ENST00000334082 KIR3DL3Q8N743 410 aa18.63■□□□□ 0.57
HOMER1-202ENST00000334082 VKORC1Q9BQB6 163 aa18.63■□□□□ 0.57
HOMER1-202ENST00000334082 TTTY12Q9BZ98 90 aa18.63■□□□□ 0.57
HOMER1-202ENST00000334082 NPIPB11E5RHQ5 1161 aa18.63■□□□□ 0.57
HOMER1-202ENST00000334082 SAA1P0DJI8 122 aaPredicted RBP18.63■□□□□ 0.57
HOMER1-202ENST00000334082 SEC11AP67812 179 aa18.63■□□□□ 0.57
HOMER1-202ENST00000334082 HIGD1CA8MV81 97 aa18.62■□□□□ 0.57
HOMER1-202ENST00000334082 FER1L6-AS1Q8NA97 138 aa18.62■□□□□ 0.57
HOMER1-202ENST00000334082 DPM2O94777 84 aa18.62■□□□□ 0.57
HOMER1-202ENST00000334082 TMEM155Q4W5P6 130 aa18.62■□□□□ 0.57
HOMER1-202ENST00000334082 ZNF562Q6V9R5 426 aa18.62■□□□□ 0.57
HOMER1-202ENST00000334082 YAE1D1Q9NRH1 226 aa18.62■□□□□ 0.57
HOMER1-202ENST00000334082 PLCH1Q4KWH8 1693 aa18.62■□□□□ 0.57
HOMER1-202ENST00000334082 SPRED2Q7Z698 418 aa18.62■□□□□ 0.57
HOMER1-202ENST00000334082 SHISA5Q8N114 240 aa18.62■□□□□ 0.57
HOMER1-202ENST00000334082 PHLDA1Q8WV24 401 aaPredicted RBP18.62■□□□□ 0.57
HOMER1-202ENST00000334082 TRAV2A0A0B4J234 112 aa18.62■□□□□ 0.57
HOMER1-202ENST00000334082 CFAP161Q6P656 301 aa18.62■□□□□ 0.57
HOMER1-202ENST00000334082 SPEM2Q0P670 501 aa18.61■□□□□ 0.57
HOMER1-202ENST00000334082 HSD52Q0P140 79 aa18.61■□□□□ 0.57
HOMER1-202ENST00000334082 IGFBP2P18065 325 aa18.61■□□□□ 0.57
HOMER1-202ENST00000334082 G6PC2Q9NQR9 355 aa18.61■□□□□ 0.57
HOMER1-202ENST00000334082 LOC390937A0A1W2PQ73 354 aa18.61■□□□□ 0.57
HOMER1-202ENST00000334082 ATXN8Q156A1 80 aa18.61■□□□□ 0.57
HOMER1-202ENST00000334082 DNM1P46Q6ZS02 220 aa18.61■□□□□ 0.57
HOMER1-202ENST00000334082 ITGB4P16144 1822 aa18.61■□□□□ 0.57
HOMER1-202ENST00000334082 MYO5AQ9Y4I1 1855 aaKnown RBP18.6■□□□□ 0.57
HOMER1-202ENST00000334082 NKX2-8O15522 239 aa18.6■□□□□ 0.57
HOMER1-202ENST00000334082 TMEM171Q8WVE6 324 aa18.6■□□□□ 0.57
HOMER1-202ENST00000334082 GDF15Q99988 308 aa18.6■□□□□ 0.57
HOMER1-202ENST00000334082 TMEM74BQ9NUR3 256 aa18.6■□□□□ 0.57
HOMER1-202ENST00000334082 TRPM3Q9HCF6 1732 aaPredicted RBP18.6■□□□□ 0.57
HOMER1-202ENST00000334082 TMEM14DPA8MWL7 114 aa18.6■□□□□ 0.57
HOMER1-202ENST00000334082 HIST1H2BKO60814 126 aa18.6■□□□□ 0.57
HOMER1-202ENST00000334082 HIST1H2BJP06899 126 aa18.6■□□□□ 0.57
HOMER1-202ENST00000334082 HIST1H2BOP23527 126 aa18.6■□□□□ 0.57
HOMER1-202ENST00000334082 HIST1H2BBP33778 126 aa18.6■□□□□ 0.57
HOMER1-202ENST00000334082 HIST1H2BDP58876 126 aa18.6■□□□□ 0.57
HOMER1-202ENST00000334082 HIST1H2BCP62807 126 aa18.6■□□□□ 0.57
HOMER1-202ENST00000334082 HIST2H2BEQ16778 126 aa18.6■□□□□ 0.57
HOMER1-202ENST00000334082 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.6■□□□□ 0.57
HOMER1-202ENST00000334082 CIARTQ8N365 385 aaPredicted RBP18.6■□□□□ 0.57
HOMER1-202ENST00000334082 HIST1H2BHQ93079 126 aa18.6■□□□□ 0.57
HOMER1-202ENST00000334082 HIST1H2BNQ99877 126 aa18.6■□□□□ 0.57
HOMER1-202ENST00000334082 HIST1H2BMQ99879 126 aa18.6■□□□□ 0.57
HOMER1-202ENST00000334082 SLC25A2Q9BXI2 301 aa18.6■□□□□ 0.57
HOMER1-202ENST00000334082 LHFPL6Q9Y693 200 aa18.6■□□□□ 0.57
HOMER1-202ENST00000334082 CCL4P13236 92 aa18.6■□□□□ 0.57
HOMER1-202ENST00000334082 TMEM186Q96B77 213 aa18.6■□□□□ 0.57
HOMER1-202ENST00000334082 C21orf140B9A014 251 aa18.6■□□□□ 0.57
HOMER1-202ENST00000334082 CITED1Q99966 193 aa18.6■□□□□ 0.57
HOMER1-202ENST00000334082 NUTF2P61970 127 aaKnown RBP18.59■□□□□ 0.57
HOMER1-202ENST00000334082 LAMA4Q16363 1823 aa18.59■□□□□ 0.57
HOMER1-202ENST00000334082 PRR7Q8TB68 274 aa18.59■□□□□ 0.57
HOMER1-202ENST00000334082 IFI27L2Q9H2X8 130 aa18.59■□□□□ 0.57
HOMER1-202ENST00000334082 DLEU1O43261 78 aa18.59■□□□□ 0.57
HOMER1-202ENST00000334082 RNF182Q8N6D2 247 aa18.59■□□□□ 0.57
HOMER1-202ENST00000334082 IGHV3-35A0A0C4DH35 117 aa18.59■□□□□ 0.57
HOMER1-202ENST00000334082 NGFRP08138 427 aa18.59■□□□□ 0.57
HOMER1-202ENST00000334082 COQ2Q96H96 371 aa18.59■□□□□ 0.57
HOMER1-202ENST00000334082 HBDP02042 147 aa18.59■□□□□ 0.57
HOMER1-202ENST00000334082 TDGF1P13385 188 aa18.59■□□□□ 0.57
HOMER1-202ENST00000334082 ASCL4Q6XD76 172 aa18.59■□□□□ 0.57
HOMER1-202ENST00000334082 RPP25Q9BUL9 199 aaKnown RBP18.59■□□□□ 0.57
HOMER1-202ENST00000334082 DDX60LQ5H9U9 1706 aaKnown RBP18.59■□□□□ 0.57
HOMER1-202ENST00000334082 IGKV3D-20A0A0C4DH25 116 aa18.59■□□□□ 0.57
HOMER1-202ENST00000334082 PRTN3P24158 256 aa18.59■□□□□ 0.57
HOMER1-202ENST00000334082 SEMA5BQ9P283 1151 aa18.59■□□□□ 0.57
HOMER1-202ENST00000334082 PEBP1P30086 187 aaKnown RBP18.58■□□□□ 0.57
HOMER1-202ENST00000334082 SSBP2P81877 361 aaPredicted RBP18.58■□□□□ 0.57
HOMER1-202ENST00000334082 OR10J3Q5JRS4 329 aa18.58■□□□□ 0.57
HOMER1-202ENST00000334082 ASPHD2Q6ICH7 369 aa18.58■□□□□ 0.57
HOMER1-202ENST00000334082 OR9G1Q8NH87 305 aa18.58■□□□□ 0.57
HOMER1-202ENST00000334082 F5P12259 2224 aa18.58■□□□□ 0.57
HOMER1-202ENST00000334082 GGTLC3B5MD39 225 aa18.58■□□□□ 0.56
HOMER1-202ENST00000334082 JMJD8Q96S16 334 aa18.58■□□□□ 0.56
HOMER1-202ENST00000334082 IGHV3OR16-13A0A075B7E8 117 aa18.58■□□□□ 0.56
HOMER1-202ENST00000334082 IGHV3-74A0A0B4J1X5 117 aa18.58■□□□□ 0.56
HOMER1-202ENST00000334082 PTGDSP41222 190 aa18.58■□□□□ 0.56
HOMER1-202ENST00000334082 HIST1H4AP62805 103 aaKnown RBP18.58■□□□□ 0.56
HOMER1-202ENST00000334082 TRIP6Q15654 476 aaKnown RBP18.58■□□□□ 0.56
HOMER1-202ENST00000334082 RNASE7Q9H1E1 156 aaKnown RBP18.57■□□□□ 0.56
HOMER1-202ENST00000334082 RNF222A6NCQ9 220 aa18.57■□□□□ 0.56
HOMER1-202ENST00000334082 TRAV5A0A0B4J249 113 aa18.57■□□□□ 0.56
HOMER1-202ENST00000334082 IGHV3-66A0A0C4DH42 116 aa18.57■□□□□ 0.56
HOMER1-202ENST00000334082 FOXS1O43638 330 aa18.57■□□□□ 0.56
HOMER1-202ENST00000334082 CD160O95971 181 aa18.57■□□□□ 0.56
HOMER1-202ENST00000334082 OR52E5Q8NH55 327 aa18.57■□□□□ 0.56
HOMER1-202ENST00000334082 APOBEC4Q8WW27 367 aaKnown RBP18.57■□□□□ 0.56
HOMER1-202ENST00000334082 IGKCP01834 107 aa18.57■□□□□ 0.56
HOMER1-202ENST00000334082 DCAF10Q5QP82 559 aa18.57■□□□□ 0.56
HOMER1-202ENST00000334082 HIST1H2BLQ99880 126 aa18.57■□□□□ 0.56
HOMER1-202ENST00000334082 EDA2RQ9HAV5 297 aa18.57■□□□□ 0.56
HOMER1-202ENST00000334082 TTC3P53804 2025 aa18.57■□□□□ 0.56
HOMER1-202ENST00000334082 TMEM30BQ3MIR4 351 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms