RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 MBD3L3A6NE82 208 aaPredicted RBP11.06□□□□□ -0.64
TUBA1B-201ENST00000332858 MBD3L5A6NJ08 208 aaPredicted RBP11.06□□□□□ -0.64
TUBA1B-201ENST00000332858 MBD3L2Q8NHZ7 208 aaPredicted RBP11.06□□□□□ -0.64
TUBA1B-201ENST00000332858 DDB2Q92466 427 aa11.06□□□□□ -0.64
TUBA1B-201ENST00000332858 GFOD1Q9NXC2 390 aa11.06□□□□□ -0.64
TUBA1B-201ENST00000332858 DMRT1Q9Y5R6 373 aa11.06□□□□□ -0.64
TUBA1B-201ENST00000332858 ZGRF1Q86YA3 2104 aa11.05□□□□□ -0.64
TUBA1B-201ENST00000332858 SAA2-SAA4A0A096LPE2 208 aa11.05□□□□□ -0.64
TUBA1B-201ENST00000332858 MMP23AO75900 390 aa11.05□□□□□ -0.64
TUBA1B-201ENST00000332858 SAA2P0DJI9 122 aaPredicted RBP11.05□□□□□ -0.64
TUBA1B-201ENST00000332858 TRAT1Q6PIZ9 186 aa11.05□□□□□ -0.64
TUBA1B-201ENST00000332858 TCF19Q9Y242 345 aa11.05□□□□□ -0.64
TUBA1B-201ENST00000332858 TRBV20OR9-2A0A075B6H5 130 aa11.05□□□□□ -0.64
TUBA1B-201ENST00000332858 ELOA3CA0A087WX78 387 aaPredicted RBP11.05□□□□□ -0.64
TUBA1B-201ENST00000332858 ARL14EPLP0DKL9 152 aa11.05□□□□□ -0.64
TUBA1B-201ENST00000332858 KLF3P57682 345 aaPredicted RBP11.05□□□□□ -0.64
TUBA1B-201ENST00000332858 GAMTQ14353 236 aa11.05□□□□□ -0.64
TUBA1B-201ENST00000332858 GGTLC1Q9BX51 225 aa11.05□□□□□ -0.64
TUBA1B-201ENST00000332858 ZNF318Q5VUA4 2279 aa11.05□□□□□ -0.64
TUBA1B-201ENST00000332858 A0A1W2PPV4 95 aa11.04□□□□□ -0.64
TUBA1B-201ENST00000332858 C1QTNF9P0C862 333 aa11.04□□□□□ -0.64
TUBA1B-201ENST00000332858 CFHR2P36980 270 aa11.04□□□□□ -0.64
TUBA1B-201ENST00000332858 RPP30P78346 268 aaKnown RBP11.04□□□□□ -0.64
TUBA1B-201ENST00000332858 SPATA31B1PQ5VZV4 182 aa11.04□□□□□ -0.64
TUBA1B-201ENST00000332858 TCF23Q7RTU1 214 aa11.04□□□□□ -0.64
TUBA1B-201ENST00000332858 LINC01551Q86U37 167 aa11.04□□□□□ -0.64
TUBA1B-201ENST00000332858 TMEM37Q8WXS4 190 aa11.04□□□□□ -0.64
TUBA1B-201ENST00000332858 RHOVQ96L33 236 aa11.04□□□□□ -0.64
TUBA1B-201ENST00000332858 PACRGQ96M98 296 aaPredicted RBP11.04□□□□□ -0.64
TUBA1B-201ENST00000332858 LY86O95711 162 aa11.04□□□□□ -0.64
TUBA1B-201ENST00000332858 RNF224P0DH78 156 aa11.04□□□□□ -0.64
TUBA1B-201ENST00000332858 FAM27E3Q08E93 113 aa11.04□□□□□ -0.64
TUBA1B-201ENST00000332858 ARSJQ5FYB0 599 aaPredicted RBP11.04□□□□□ -0.64
TUBA1B-201ENST00000332858 PXMP4Q9Y6I8 212 aa11.04□□□□□ -0.64
TUBA1B-201ENST00000332858 TANC2Q9HCD6 1990 aa11.04□□□□□ -0.64
TUBA1B-201ENST00000332858 RAI1Q7Z5J4 1906 aaPredicted RBP11.04□□□□□ -0.64
TUBA1B-201ENST00000332858 PPP5D1E7EU14 171 aa11.04□□□□□ -0.64
TUBA1B-201ENST00000332858 HRASP01112 189 aa11.04□□□□□ -0.64
TUBA1B-201ENST00000332858 GNG10P50151 68 aa11.04□□□□□ -0.64
TUBA1B-201ENST00000332858 ERVK-16P61578 105 aa11.04□□□□□ -0.64
TUBA1B-201ENST00000332858 FAM122AQ96E09 287 aa11.04□□□□□ -0.64
TUBA1B-201ENST00000332858 OR5B12Q96R08 314 aa11.04□□□□□ -0.64
TUBA1B-201ENST00000332858 SEPSECSQ9HD40 501 aaKnown RBP11.04□□□□□ -0.64
TUBA1B-201ENST00000332858 GCM1Q9NP62 436 aa11.04□□□□□ -0.64
TUBA1B-201ENST00000332858 PPP1R14DQ9NXH3 145 aa11.04□□□□□ -0.64
TUBA1B-201ENST00000332858 CUL9Q8IWT3 2517 aa11.04□□□□□ -0.64
TUBA1B-201ENST00000332858 CEP295Q9C0D2 2601 aa11.03□□□□□ -0.64
TUBA1B-201ENST00000332858 HIST1H1BP16401 226 aaKnown RBP11.03□□□□□ -0.64
TUBA1B-201ENST00000332858 HNF1AP20823 631 aa11.03□□□□□ -0.64
TUBA1B-201ENST00000332858 GLRXP35754 106 aa11.03□□□□□ -0.64
TUBA1B-201ENST00000332858 OR4A47Q6IF82 309 aa11.03□□□□□ -0.64
TUBA1B-201ENST00000332858 PITPNC1Q9UKF7 332 aa11.03□□□□□ -0.64
TUBA1B-201ENST00000332858 FUT9Q9Y231 359 aa11.03□□□□□ -0.64
TUBA1B-201ENST00000332858 LRBAP50851 2863 aa11.03□□□□□ -0.64
TUBA1B-201ENST00000332858 DYSFO75923 2080 aa11.03□□□□□ -0.64
TUBA1B-201ENST00000332858 RBFOX2O43251 390 aaKnown RBP eCLIP11.03□□□□□ -0.64
TUBA1B-201ENST00000332858 MZT1Q08AG7 82 aa11.03□□□□□ -0.64
TUBA1B-201ENST00000332858 PDLIM3Q53GG5 364 aaPredicted RBP11.03□□□□□ -0.64
TUBA1B-201ENST00000332858 TIMM23BQ5SRD1 257 aa11.03□□□□□ -0.64
TUBA1B-201ENST00000332858 LYG1Q8N1E2 194 aa11.03□□□□□ -0.64
TUBA1B-201ENST00000332858 FAM216BQ8N7L0 139 aa11.03□□□□□ -0.64
TUBA1B-201ENST00000332858 PPP1R35Q8TAP8 253 aa11.03□□□□□ -0.64
TUBA1B-201ENST00000332858 PFDN5Q99471 154 aa11.03□□□□□ -0.64
TUBA1B-201ENST00000332858 CCL13Q99616 98 aa11.03□□□□□ -0.64
TUBA1B-201ENST00000332858 HINT2Q9BX68 163 aa11.03□□□□□ -0.64
TUBA1B-201ENST00000332858 PTPRZ1P23471 2315 aaPredicted RBP11.03□□□□□ -0.64
TUBA1B-201ENST00000332858 FOXH1O75593 365 aa11.02□□□□□ -0.64
TUBA1B-201ENST00000332858 CEACAM4O75871 244 aa11.02□□□□□ -0.64
TUBA1B-201ENST00000332858 OPRK1P41145 380 aa11.02□□□□□ -0.64
TUBA1B-201ENST00000332858 MOB3BQ86TA1 216 aa11.02□□□□□ -0.64
TUBA1B-201ENST00000332858 ZCCHC24Q8N2G6 241 aaKnown RBP11.02□□□□□ -0.64
TUBA1B-201ENST00000332858 ZADH2Q8N4Q0 377 aa11.02□□□□□ -0.64
TUBA1B-201ENST00000332858 OR52E5Q8NH55 327 aa11.02□□□□□ -0.64
TUBA1B-201ENST00000332858 PLXNB1O43157 2135 aa11.02□□□□□ -0.65
TUBA1B-201ENST00000332858 CSMD1Q96PZ7 3565 aa11.02□□□□□ -0.65
TUBA1B-201ENST00000332858 KBTBD11-OT1A0A1B0GTJ5 212 aa11.02□□□□□ -0.65
TUBA1B-201ENST00000332858 AMBPP02760 352 aa11.02□□□□□ -0.65
TUBA1B-201ENST00000332858 FAM78BQ5VT40 261 aa11.02□□□□□ -0.65
TUBA1B-201ENST00000332858 UNQ6494/PRO21346Q6UXR6 183 aa11.02□□□□□ -0.65
TUBA1B-201ENST00000332858 OR2T10Q8NGZ9 312 aa11.02□□□□□ -0.65
TUBA1B-201ENST00000332858 TMEM68Q96MH6 324 aa11.02□□□□□ -0.65
TUBA1B-201ENST00000332858 LSM4Q9Y4Z0 139 aaKnown RBP11.02□□□□□ -0.65
TUBA1B-201ENST00000332858 APC2O95996 2303 aa11.02□□□□□ -0.65
TUBA1B-201ENST00000332858 POLEQ07864 2286 aa11.02□□□□□ -0.65
TUBA1B-201ENST00000332858 DCHS2Q6V1P9 2916 aa11.02□□□□□ -0.65
TUBA1B-201ENST00000332858 IGLV3-9A0A075B6K5 115 aa11.02□□□□□ -0.65
TUBA1B-201ENST00000332858 XKRY2A2RUG3 117 aa11.02□□□□□ -0.65
TUBA1B-201ENST00000332858 FAM90A9PA6NNJ1 464 aa11.02□□□□□ -0.65
TUBA1B-201ENST00000332858 C15orf61A6NNL5 157 aa11.02□□□□□ -0.65
TUBA1B-201ENST00000332858 TGOLN2O43493 480 aa11.02□□□□□ -0.65
TUBA1B-201ENST00000332858 IGKV1-16P04430 117 aa11.02□□□□□ -0.65
TUBA1B-201ENST00000332858 STAG3L2P0CL84 134 aa11.02□□□□□ -0.65
TUBA1B-201ENST00000332858 STAG3L3P0CL85 134 aa11.02□□□□□ -0.65
TUBA1B-201ENST00000332858 TMPRSS3P57727 454 aa11.02□□□□□ -0.65
TUBA1B-201ENST00000332858 TMEM183AQ8IXX5 376 aa11.02□□□□□ -0.65
TUBA1B-201ENST00000332858 RAB1CQ92928 201 aa11.02□□□□□ -0.65
TUBA1B-201ENST00000332858 PRO1933Q9H354 126 aa11.02□□□□□ -0.65
TUBA1B-201ENST00000332858 YTHDF2Q9Y5A9 579 aaKnown RBP11.02□□□□□ -0.65
TUBA1B-201ENST00000332858 SCO2A0A1W2PP80 73 aa11.01□□□□□ -0.65
TUBA1B-201ENST00000332858 ZNF729A6NN14 1252 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms