RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 HMSDA8MTL9 139 aa9.64□□□□□ -0.87
TRIM49B-201ENST00000332682 CHST1O43916 411 aa9.64□□□□□ -0.87
TRIM49B-201ENST00000332682 RLN2P04090 185 aa9.64□□□□□ -0.87
TRIM49B-201ENST00000332682 SPCS3P61009 180 aa9.64□□□□□ -0.87
TRIM49B-201ENST00000332682 AANATQ16613 207 aa9.64□□□□□ -0.87
TRIM49B-201ENST00000332682 PRSS8Q16651 343 aa9.64□□□□□ -0.87
TRIM49B-201ENST00000332682 DEFB112Q30KQ8 113 aa9.64□□□□□ -0.87
TRIM49B-201ENST00000332682 SPINK9Q5DT21 86 aa9.64□□□□□ -0.87
TRIM49B-201ENST00000332682 ZNF546Q86UE3 836 aa9.64□□□□□ -0.87
TRIM49B-201ENST00000332682 PPP1R27Q86WC6 154 aa9.64□□□□□ -0.87
TRIM49B-201ENST00000332682 C9orf62Q8N4C0 152 aa9.64□□□□□ -0.87
TRIM49B-201ENST00000332682 TEX29Q8N6K0 151 aa9.64□□□□□ -0.87
TRIM49B-201ENST00000332682 OR5B3Q8NH48 314 aa9.64□□□□□ -0.87
TRIM49B-201ENST00000332682 SSX3Q99909 188 aa9.64□□□□□ -0.87
TRIM49B-201ENST00000332682 RBKSQ9H477 322 aa9.64□□□□□ -0.87
TRIM49B-201ENST00000332682 CACFD1Q9UGQ2 172 aa9.64□□□□□ -0.87
TRIM49B-201ENST00000332682 TNFSF18Q9UNG2 199 aa9.64□□□□□ -0.87
TRIM49B-201ENST00000332682 TCF19Q9Y242 345 aa9.64□□□□□ -0.87
TRIM49B-201ENST00000332682 OR51B2Q9Y5P1 312 aa9.64□□□□□ -0.87
TRIM49B-201ENST00000332682 RNF222A6NCQ9 220 aa9.63□□□□□ -0.87
TRIM49B-201ENST00000332682 E5RGE8 158 aa9.63□□□□□ -0.87
TRIM49B-201ENST00000332682 H3BUX3 64 aa9.63□□□□□ -0.87
TRIM49B-201ENST00000332682 KCNAB3O43448 404 aa9.63□□□□□ -0.87
TRIM49B-201ENST00000332682 MED6O75586 246 aa9.63□□□□□ -0.87
TRIM49B-201ENST00000332682 IFNA17P01571 189 aa9.63□□□□□ -0.87
TRIM49B-201ENST00000332682 HSPE1P61604 102 aaKnown RBP9.63□□□□□ -0.87
TRIM49B-201ENST00000332682 C5orf64Q2M2E5 130 aa9.63□□□□□ -0.87
TRIM49B-201ENST00000332682 LAMTOR1Q6IAA8 161 aa9.63□□□□□ -0.87
TRIM49B-201ENST00000332682 IL17RELQ6ZVW7 336 aa9.63□□□□□ -0.87
TRIM49B-201ENST00000332682 MMD2Q8IY49 270 aa9.63□□□□□ -0.87
TRIM49B-201ENST00000332682 OR8H1Q8NGG4 311 aa9.63□□□□□ -0.87
TRIM49B-201ENST00000332682 ZDHHC16Q969W1 377 aa9.63□□□□□ -0.87
TRIM49B-201ENST00000332682 RAB40CQ96S21 281 aa9.63□□□□□ -0.87
TRIM49B-201ENST00000332682 YAE1D1Q9NRH1 226 aa9.63□□□□□ -0.87
TRIM49B-201ENST00000332682 FKBP11Q9NYL4 201 aa9.63□□□□□ -0.87
TRIM49B-201ENST00000332682 KIAA1456Q9P272 454 aa9.63□□□□□ -0.87
TRIM49B-201ENST00000332682 SETXQ7Z333 2677 aaKnown RBP9.63□□□□□ -0.87
TRIM49B-201ENST00000332682 TEX50A0A1B0GTY4 177 aa9.62□□□□□ -0.87
TRIM49B-201ENST00000332682 MSGN1A6NI15 193 aa9.62□□□□□ -0.87
TRIM49B-201ENST00000332682 CEBPZOSA8MTT3 80 aa9.62□□□□□ -0.87
TRIM49B-201ENST00000332682 OR2F2O95006 317 aa9.62□□□□□ -0.87
TRIM49B-201ENST00000332682 OPN1MWP04001 364 aa9.62□□□□□ -0.87
TRIM49B-201ENST00000332682 OPN1MW2P0DN77 364 aa9.62□□□□□ -0.87
TRIM49B-201ENST00000332682 OPN1MW3P0DN78 364 aa9.62□□□□□ -0.87
TRIM49B-201ENST00000332682 IAPPP10997 89 aa9.62□□□□□ -0.87
TRIM49B-201ENST00000332682 CXCL2P19875 107 aa9.62□□□□□ -0.87
TRIM49B-201ENST00000332682 PVALBP20472 110 aaPredicted RBP9.62□□□□□ -0.87
TRIM49B-201ENST00000332682 PAX9P55771 341 aa9.62□□□□□ -0.87
TRIM49B-201ENST00000332682 SSBP2P81877 361 aaPredicted RBP9.62□□□□□ -0.87
TRIM49B-201ENST00000332682 PRCDQ00LT1 54 aa9.62□□□□□ -0.87
TRIM49B-201ENST00000332682 PLGLAQ15195 96 aa9.62□□□□□ -0.87
TRIM49B-201ENST00000332682 C10orf55Q5SWW7 151 aa9.62□□□□□ -0.87
TRIM49B-201ENST00000332682 DTD1Q8TEA8 209 aa9.62□□□□□ -0.87
TRIM49B-201ENST00000332682 CLCC1Q96S66 551 aa9.62□□□□□ -0.87
TRIM49B-201ENST00000332682 SMR3AQ99954 134 aa9.62□□□□□ -0.87
TRIM49B-201ENST00000332682 COMMD5Q9GZQ3 224 aa9.62□□□□□ -0.87
TRIM49B-201ENST00000332682 MFFQ9GZY8 342 aa9.62□□□□□ -0.87
TRIM49B-201ENST00000332682 WSB1Q9Y6I7 421 aa9.62□□□□□ -0.87
TRIM49B-201ENST00000332682 MXRA5Q9NR99 2828 aa9.62□□□□□ -0.87
TRIM49B-201ENST00000332682 A0A1B0GW64 132 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 NCBP2LA6PVI3 153 aaKnown RBP9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 L7N2F9 121 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 FCN1O00602 326 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 MAS1LP35410 378 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 VDAC2P45880 294 aaPredicted RBP9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 P2RY1P47900 373 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 VAMP2P63027 116 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 ZNF345Q14585 488 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 LGALSLQ3ZCW2 172 aaPredicted RBP9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 TMEM219Q86XT9 240 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 Q8N9W7 124 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 OR1L8Q8NGR8 309 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 SMIM8Q96KF7 97 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 ZNF48Q96MX3 618 aaPredicted RBP9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 AQP10Q96PS8 301 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 LYRM2Q9NU23 88 aaPredicted RBP9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 C1RLQ9NZP8 487 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 HSPB11Q9Y547 144 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 A6NDX4 124 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 CGB1A6NKQ9 187 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 E7EUB6 86 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 H3BP45 60 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 TSC22D2O75157 780 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 CA2P00918 260 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 HKR1P10072 659 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 HOXA1P49639 335 aaPredicted RBP9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 COMPP49747 757 aaPredicted RBP9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 CAV2P51636 162 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 TAS2R30P59541 319 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 TNXAQ16473 311 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 TUSC1Q2TAM9 212 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 ACOT7LQ6ZUV0 252 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 OR2C3Q8N628 320 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 INO80EQ8NBZ0 244 aaPredicted RBP9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 RBM14Q96PK6 669 aaKnown RBP9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 CIB3Q96Q77 187 aaPredicted RBP9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 SLC25A33Q9BSK2 321 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 TMUB1Q9BVT8 246 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 HINT2Q9BX68 163 aa9.61□□□□□ -0.87
TRIM49B-201ENST00000332682 PRDM13Q9H4Q3 707 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms