RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 POLEQ07864 2286 aa14.05□□□□□ -0.16
PTCH1-201ENST00000331920 MGST3O14880 152 aa14.05□□□□□ -0.16
PTCH1-201ENST00000331920 LDLRAD2Q5SZI1 272 aa14.05□□□□□ -0.16
PTCH1-201ENST00000331920 ATG4DQ86TL0 474 aaPredicted RBP14.05□□□□□ -0.16
PTCH1-201ENST00000331920 ADARB2-AS1A8MUL3 147 aa14.05□□□□□ -0.16
PTCH1-201ENST00000331920 CTGFP29279 349 aa14.05□□□□□ -0.16
PTCH1-201ENST00000331920 MS4A6AQ9H2W1 248 aa14.05□□□□□ -0.16
PTCH1-201ENST00000331920 TGIF1Q15583 401 aa14.05□□□□□ -0.16
PTCH1-201ENST00000331920 CITED1Q99966 193 aa14.05□□□□□ -0.16
PTCH1-201ENST00000331920 TRBV9A0A0B4J1U6 114 aa14.05□□□□□ -0.16
PTCH1-201ENST00000331920 FGF12P61328 243 aa14.05□□□□□ -0.16
PTCH1-201ENST00000331920 TNFRSF9Q07011 255 aa14.05□□□□□ -0.16
PTCH1-201ENST00000331920 DEFB121Q5J5C9 76 aa14.04□□□□□ -0.16
PTCH1-201ENST00000331920 C1orf174Q8IYL3 243 aa14.04□□□□□ -0.16
PTCH1-201ENST00000331920 APCDD1LQ8NCL9 501 aa14.04□□□□□ -0.16
PTCH1-201ENST00000331920 R3HDMLQ9H3Y0 253 aa14.04□□□□□ -0.16
PTCH1-201ENST00000331920 IFI27P40305 119 aaPredicted RBP14.04□□□□□ -0.16
PTCH1-201ENST00000331920 ZNF585BQ52M93 769 aa14.04□□□□□ -0.16
PTCH1-201ENST00000331920 LRP6O75581 1613 aa14.04□□□□□ -0.16
PTCH1-201ENST00000331920 TXNDC17Q9BRA2 123 aa14.04□□□□□ -0.16
PTCH1-201ENST00000331920 SCN5AQ14524 2016 aa14.04□□□□□ -0.16
PTCH1-201ENST00000331920 PGLYRP1O75594 196 aaPredicted RBP14.04□□□□□ -0.16
PTCH1-201ENST00000331920 TMEM86BQ8N661 226 aa14.04□□□□□ -0.16
PTCH1-201ENST00000331920 PATE3B3GLJ2 98 aa14.04□□□□□ -0.16
PTCH1-201ENST00000331920 COQ2Q96H96 371 aa14.04□□□□□ -0.16
PTCH1-201ENST00000331920 ZNF345Q14585 488 aa14.04□□□□□ -0.16
PTCH1-201ENST00000331920 MARS2Q96GW9 593 aaKnown RBP14.04□□□□□ -0.16
PTCH1-201ENST00000331920 PCOLCEQ15113 449 aa14.03□□□□□ -0.16
PTCH1-201ENST00000331920 IGKV1D-42A0A075B6H8 117 aa14.03□□□□□ -0.16
PTCH1-201ENST00000331920 PSG4Q00888 419 aa14.03□□□□□ -0.16
PTCH1-201ENST00000331920 CA11O75493 328 aa14.03□□□□□ -0.16
PTCH1-201ENST00000331920 COL9A1P20849 921 aa14.03□□□□□ -0.16
PTCH1-201ENST00000331920 TMEM252Q8N6L7 170 aa14.03□□□□□ -0.16
PTCH1-201ENST00000331920 KCNE1BA0A087WTH5 132 aa14.03□□□□□ -0.16
PTCH1-201ENST00000331920 GCM2O75603 506 aaPredicted RBP14.03□□□□□ -0.16
PTCH1-201ENST00000331920 SELENOHQ8IZQ5 122 aaKnown RBP14.03□□□□□ -0.16
PTCH1-201ENST00000331920 CACNA1IQ9P0X4 2223 aa14.03□□□□□ -0.16
PTCH1-201ENST00000331920 M0R2P5 195 aa14.03□□□□□ -0.16
PTCH1-201ENST00000331920 IGHV3-11P01762 117 aa14.03□□□□□ -0.16
PTCH1-201ENST00000331920 CD28P10747 220 aa14.03□□□□□ -0.16
PTCH1-201ENST00000331920 IL9P15248 144 aa14.03□□□□□ -0.16
PTCH1-201ENST00000331920 OR11H4Q8NGC9 324 aa14.03□□□□□ -0.16
PTCH1-201ENST00000331920 TRAV8-1A0A0A6YYK1 113 aa14.02□□□□□ -0.16
PTCH1-201ENST00000331920 IGKV1D-33P01593 117 aa14.02□□□□□ -0.16
PTCH1-201ENST00000331920 IGKV1-33P01594 117 aa14.02□□□□□ -0.16
PTCH1-201ENST00000331920 TEX45Q8NA69 505 aa14.02□□□□□ -0.16
PTCH1-201ENST00000331920 SIGMAR1Q99720 223 aa14.02□□□□□ -0.16
PTCH1-201ENST00000331920 TMEM222Q9H0R3 208 aa14.02□□□□□ -0.16
PTCH1-201ENST00000331920 NCOR1O75376 2440 aa14.02□□□□□ -0.16
PTCH1-201ENST00000331920 CEP250Q9BV73 2442 aa14.02□□□□□ -0.16
PTCH1-201ENST00000331920 F8WEM9 126 aa14.02□□□□□ -0.16
PTCH1-201ENST00000331920 PRTN3P24158 256 aa14.02□□□□□ -0.16
PTCH1-201ENST00000331920 ZNF257Q9Y2Q1 563 aa14.02□□□□□ -0.16
PTCH1-201ENST00000331920 OCIAD2Q56VL3 154 aa14.02□□□□□ -0.17
PTCH1-201ENST00000331920 FREM3P0C091 2139 aa14.02□□□□□ -0.17
PTCH1-201ENST00000331920 ZNF79Q15937 498 aa14.02□□□□□ -0.17
PTCH1-201ENST00000331920 FAM209AQ5JX71 171 aa14.02□□□□□ -0.17
PTCH1-201ENST00000331920 IGHV3-73A0A0B4J1V6 119 aa14.02□□□□□ -0.17
PTCH1-201ENST00000331920 CELA2AP08217 269 aa14.02□□□□□ -0.17
PTCH1-201ENST00000331920 FHITP49789 147 aa14.02□□□□□ -0.17
PTCH1-201ENST00000331920 SMDT1Q9H4I9 107 aa14.02□□□□□ -0.17
PTCH1-201ENST00000331920 ELF5Q9UKW6 265 aaPredicted RBP14.02□□□□□ -0.17
PTCH1-201ENST00000331920 DNM1P46Q6ZS02 220 aa14.01□□□□□ -0.17
PTCH1-201ENST00000331920 CHCHD5Q9BSY4 110 aa14.01□□□□□ -0.17
PTCH1-201ENST00000331920 KLHDC2Q9Y2U9 406 aa14.01□□□□□ -0.17
PTCH1-201ENST00000331920 ZNF818PQ6ZRF7 136 aa14.01□□□□□ -0.17
PTCH1-201ENST00000331920 CYP2G1PQ6ZSU1 146 aa14.01□□□□□ -0.17
PTCH1-201ENST00000331920 RNF115Q9Y4L5 304 aa14.01□□□□□ -0.17
PTCH1-201ENST00000331920 ODAMA1E959 279 aa14.01□□□□□ -0.17
PTCH1-201ENST00000331920 CGAP01215 116 aa14.01□□□□□ -0.17
PTCH1-201ENST00000331920 OR4X2Q8NGF9 303 aa14.01□□□□□ -0.17
PTCH1-201ENST00000331920 VWC2LB2RUY7 222 aa14.01□□□□□ -0.17
PTCH1-201ENST00000331920 SEPSECSQ9HD40 501 aaKnown RBP14.01□□□□□ -0.17
PTCH1-201ENST00000331920 IGHV1-69-2A0A0G2JMI3 117 aa14.01□□□□□ -0.17
PTCH1-201ENST00000331920 RND3P61587 244 aa14.01□□□□□ -0.17
PTCH1-201ENST00000331920 ZFAND6Q6FIF0 208 aa14.01□□□□□ -0.17
PTCH1-201ENST00000331920 TNFRSF6BO95407 300 aa14.01□□□□□ -0.17
PTCH1-201ENST00000331920 FOCADQ5VW36 1801 aa14□□□□□ -0.17
PTCH1-201ENST00000331920 TBR1Q16650 682 aa14□□□□□ -0.17
PTCH1-201ENST00000331920 LINC01560Q8TB33 94 aa14□□□□□ -0.17
PTCH1-201ENST00000331920 MIXL1Q9H2W2 232 aa14□□□□□ -0.17
PTCH1-201ENST00000331920 ST20Q9HBF5 79 aa14□□□□□ -0.17
PTCH1-201ENST00000331920 MYO7BQ6PIF6 2116 aa14□□□□□ -0.17
PTCH1-201ENST00000331920 LGALS1P09382 135 aaKnown RBP14□□□□□ -0.17
PTCH1-201ENST00000331920 SCARF2Q96GP6 870 aaPredicted RBP14□□□□□ -0.17
PTCH1-201ENST00000331920 YAE1D1Q9NRH1 226 aa14□□□□□ -0.17
PTCH1-201ENST00000331920 MAST2Q6P0Q8 1798 aa14□□□□□ -0.17
PTCH1-201ENST00000331920 PAX4O43316 350 aa14□□□□□ -0.17
PTCH1-201ENST00000331920 GLIPR1P48060 266 aa14□□□□□ -0.17
PTCH1-201ENST00000331920 LHX2P50458 406 aa14□□□□□ -0.17
PTCH1-201ENST00000331920 G6PC2Q9NQR9 355 aa14□□□□□ -0.17
PTCH1-201ENST00000331920 ZNF107Q9UII5 783 aaPredicted RBP14□□□□□ -0.17
PTCH1-201ENST00000331920 PLNP26678 52 aa14□□□□□ -0.17
PTCH1-201ENST00000331920 FER1L6-AS1Q8NA97 138 aa14□□□□□ -0.17
PTCH1-201ENST00000331920 GPR132Q9UNW8 380 aa14□□□□□ -0.17
PTCH1-201ENST00000331920 SCO2A0A1W2PP80 73 aa14□□□□□ -0.17
PTCH1-201ENST00000331920 LHFPL4Q7Z7J7 247 aa14□□□□□ -0.17
PTCH1-201ENST00000331920 GCHFRP30047 84 aa13.99□□□□□ -0.17
PTCH1-201ENST00000331920 A0A1B0GUT8 65 aa13.99□□□□□ -0.17
PTCH1-201ENST00000331920 CLPSL1A2RUU4 121 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms