RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 PEF1Q9UBV8 284 aaKnown RBP21.24■□□□□ 0.99
ATPAF1-201ENST00000329231 TRBV9A0A0B4J1U6 114 aa21.23■□□□□ 0.99
ATPAF1-201ENST00000329231 PRH1P02810 166 aa21.23■□□□□ 0.99
ATPAF1-201ENST00000329231 F2RP25116 425 aa21.23■□□□□ 0.99
ATPAF1-201ENST00000329231 S100GP29377 79 aa21.23■□□□□ 0.99
ATPAF1-201ENST00000329231 DMBX1Q8NFW5 382 aa21.23■□□□□ 0.99
ATPAF1-201ENST00000329231 AKIP1Q9NQ31 210 aa21.23■□□□□ 0.99
ATPAF1-201ENST00000329231 NDUFA13Q9P0J0 144 aa21.23■□□□□ 0.99
ATPAF1-201ENST00000329231 ZNF256Q9Y2P7 627 aaPredicted RBP21.23■□□□□ 0.99
ATPAF1-201ENST00000329231 NPIPB5A8MRT5 1133 aa21.22■□□□□ 0.99
ATPAF1-201ENST00000329231 M0QYG6 137 aa21.22■□□□□ 0.99
ATPAF1-201ENST00000329231 RBMXL2O75526 392 aaKnown RBP21.22■□□□□ 0.99
ATPAF1-201ENST00000329231 S1PR2O95136 353 aa21.22■□□□□ 0.99
ATPAF1-201ENST00000329231 ERVK-16P61578 105 aa21.22■□□□□ 0.99
ATPAF1-201ENST00000329231 ZNF45Q02386 682 aa21.22■□□□□ 0.99
ATPAF1-201ENST00000329231 ATP5G2Q06055 141 aa21.22■□□□□ 0.99
ATPAF1-201ENST00000329231 RNASE10Q5GAN6 216 aaKnown RBP21.22■□□□□ 0.99
ATPAF1-201ENST00000329231 TMEM229BQ8NBD8 167 aa21.22■□□□□ 0.99
ATPAF1-201ENST00000329231 NECAP1Q8NC96 275 aa21.22■□□□□ 0.99
ATPAF1-201ENST00000329231 DGCR14Q96DF8 476 aaKnown RBP21.22■□□□□ 0.99
ATPAF1-201ENST00000329231 PRR25Q96S07 402 aa21.22■□□□□ 0.99
ATPAF1-201ENST00000329231 ELOVL1Q9BW60 279 aa21.22■□□□□ 0.99
ATPAF1-201ENST00000329231 FABP12A6NFH5 140 aa21.21■□□□□ 0.99
ATPAF1-201ENST00000329231 E7EUB6 86 aa21.21■□□□□ 0.99
ATPAF1-201ENST00000329231 UPK2O00526 184 aa21.21■□□□□ 0.99
ATPAF1-201ENST00000329231 CD3DP04234 171 aa21.21■□□□□ 0.99
ATPAF1-201ENST00000329231 IFNA6P05013 189 aa21.21■□□□□ 0.99
ATPAF1-201ENST00000329231 TAS2R19P59542 299 aa21.21■□□□□ 0.99
ATPAF1-201ENST00000329231 OR4C12Q96R67 309 aa21.21■□□□□ 0.99
ATPAF1-201ENST00000329231 SOSTQ9BQB4 213 aa21.21■□□□□ 0.99
ATPAF1-201ENST00000329231 TMEM140Q9NV12 185 aa21.21■□□□□ 0.99
ATPAF1-201ENST00000329231 A0A1B0GW64 132 aa21.2■□□□□ 0.98
ATPAF1-201ENST00000329231 FGF2P09038 288 aa21.2■□□□□ 0.98
ATPAF1-201ENST00000329231 UCP3P55916 312 aa21.2■□□□□ 0.98
ATPAF1-201ENST00000329231 DHFRP00374 187 aa21.19■□□□□ 0.98
ATPAF1-201ENST00000329231 CD74P04233 296 aa21.19■□□□□ 0.98
ATPAF1-201ENST00000329231 S100A5P33763 92 aa21.19■□□□□ 0.98
ATPAF1-201ENST00000329231 LPAR6P43657 344 aa21.19■□□□□ 0.98
ATPAF1-201ENST00000329231 EXOSC2Q13868 293 aaKnown RBP21.19■□□□□ 0.98
ATPAF1-201ENST00000329231 KLF5Q13887 457 aaPredicted RBP21.19■□□□□ 0.98
ATPAF1-201ENST00000329231 PHLDA2Q53GA4 152 aa21.19■□□□□ 0.98
ATPAF1-201ENST00000329231 SLC38A6Q8IZM9 456 aa21.19■□□□□ 0.98
ATPAF1-201ENST00000329231 ARRDC1Q8N5I2 433 aa21.19■□□□□ 0.98
ATPAF1-201ENST00000329231 OR6Q1Q8NGQ2 317 aa21.19■□□□□ 0.98
ATPAF1-201ENST00000329231 RSRP1Q9BUV0 290 aa21.19■□□□□ 0.98
ATPAF1-201ENST00000329231 COMMD5Q9GZQ3 224 aa21.19■□□□□ 0.98
ATPAF1-201ENST00000329231 TRAV3A0A0B4J244 114 aa21.18■□□□□ 0.98
ATPAF1-201ENST00000329231 MARCH11A6NNE9 402 aa21.18■□□□□ 0.98
ATPAF1-201ENST00000329231 GSTZ1O43708 216 aaPredicted RBP21.18■□□□□ 0.98
ATPAF1-201ENST00000329231 LY86O95711 162 aa21.18■□□□□ 0.98
ATPAF1-201ENST00000329231 CRYGCP07315 174 aa21.18■□□□□ 0.98
ATPAF1-201ENST00000329231 MYOD1P15172 320 aa21.18■□□□□ 0.98
ATPAF1-201ENST00000329231 AREGP15514 252 aa21.18■□□□□ 0.98
ATPAF1-201ENST00000329231 PSMB6P28072 239 aa21.18■□□□□ 0.98
ATPAF1-201ENST00000329231 FAM209BQ5JX69 171 aa21.18■□□□□ 0.98
ATPAF1-201ENST00000329231 OR2J3O76001 311 aa21.17■□□□□ 0.98
ATPAF1-201ENST00000329231 RAB3DO95716 219 aa21.17■□□□□ 0.98
ATPAF1-201ENST00000329231 TRBV12-3P01733 135 aa21.17■□□□□ 0.98
ATPAF1-201ENST00000329231 OR2B8PP59922 312 aa21.17■□□□□ 0.98
ATPAF1-201ENST00000329231 TATDN3Q17R31 274 aa21.17■□□□□ 0.98
ATPAF1-201ENST00000329231 RPEL1Q2QD12 228 aa21.17■□□□□ 0.98
ATPAF1-201ENST00000329231 C15orf32Q32M92 178 aa21.17■□□□□ 0.98
ATPAF1-201ENST00000329231 STEAP1BQ6NZ63 245 aa21.17■□□□□ 0.98
ATPAF1-201ENST00000329231 FAM212BQ9NTI7 297 aaPredicted RBP21.17■□□□□ 0.98
ATPAF1-201ENST00000329231 RPA2P15927 270 aa21.16■□□□□ 0.98
ATPAF1-201ENST00000329231 CTRB1P17538 263 aa21.16■□□□□ 0.98
ATPAF1-201ENST00000329231 ZNF585BQ52M93 769 aa21.16■□□□□ 0.98
ATPAF1-201ENST00000329231 CTRB2Q6GPI1 263 aa21.16■□□□□ 0.98
ATPAF1-201ENST00000329231 LHFPL1Q86WI0 220 aa21.16■□□□□ 0.98
ATPAF1-201ENST00000329231 CADM3Q8N126 398 aa21.16■□□□□ 0.98
ATPAF1-201ENST00000329231 SRSF8Q9BRL6 282 aaKnown RBP21.16■□□□□ 0.98
ATPAF1-201ENST00000329231 FBXL7Q9UJT9 491 aa21.16■□□□□ 0.98
ATPAF1-201ENST00000329231 LSM4Q9Y4Z0 139 aaKnown RBP21.16■□□□□ 0.98
ATPAF1-201ENST00000329231 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP21.15■□□□□ 0.98
ATPAF1-201ENST00000329231 CGB1A6NKQ9 187 aa21.15■□□□□ 0.98
ATPAF1-201ENST00000329231 KRASP01116 189 aa21.15■□□□□ 0.98
ATPAF1-201ENST00000329231 DEFA4P12838 97 aa21.15■□□□□ 0.98
ATPAF1-201ENST00000329231 HIST1H1BP16401 226 aaKnown RBP21.15■□□□□ 0.98
ATPAF1-201ENST00000329231 SYNJ2BPP57105 145 aa21.15■□□□□ 0.98
ATPAF1-201ENST00000329231 CD69Q07108 199 aa21.15■□□□□ 0.98
ATPAF1-201ENST00000329231 MEF2DQ14814 521 aa21.15■□□□□ 0.98
ATPAF1-201ENST00000329231 TBC1D26Q86UD7 250 aa21.15■□□□□ 0.98
ATPAF1-201ENST00000329231 OR4D10Q8NGI6 311 aa21.15■□□□□ 0.98
ATPAF1-201ENST00000329231 OR9G4Q8NGQ1 327 aa21.15■□□□□ 0.98
ATPAF1-201ENST00000329231 B9D2Q9BPU9 175 aa21.15■□□□□ 0.98
ATPAF1-201ENST00000329231 THOC7Q6I9Y2 204 aaKnown RBP21.14■□□□□ 0.97
ATPAF1-201ENST00000329231 C19orf35Q6ZS72 473 aa21.14■□□□□ 0.97
ATPAF1-201ENST00000329231 FANCD2OSQ96PS1 177 aa21.14■□□□□ 0.97
ATPAF1-201ENST00000329231 QTRT1Q9BXR0 403 aaKnown RBP21.14■□□□□ 0.97
ATPAF1-201ENST00000329231 SPNP16150 400 aa21.13■□□□□ 0.97
ATPAF1-201ENST00000329231 G6PCP35575 357 aa21.13■□□□□ 0.97
ATPAF1-201ENST00000329231 KLK9Q2XQG4 91 aa21.13■□□□□ 0.97
ATPAF1-201ENST00000329231 CCDC190Q86UF4 302 aa21.13■□□□□ 0.97
ATPAF1-201ENST00000329231 KLK9Q9UKQ9 250 aa21.13■□□□□ 0.97
ATPAF1-201ENST00000329231 V9GYH0 126 aa21.13■□□□□ 0.97
ATPAF1-201ENST00000329231 SNAPC5O75971 98 aa21.12■□□□□ 0.97
ATPAF1-201ENST00000329231 REG1AP05451 166 aa21.12■□□□□ 0.97
ATPAF1-201ENST00000329231 AKAIN1P0CW23 69 aa21.12■□□□□ 0.97
ATPAF1-201ENST00000329231 PGAM2P15259 253 aa21.12■□□□□ 0.97
ATPAF1-201ENST00000329231 OR1L8Q8NGR8 309 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms