RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 OR4A8P0C604 315 aa10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 IGFBP2P18065 325 aa10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 KLF3P57682 345 aaPredicted RBP10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 KIAA1644Q3SXP7 199 aa10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 SPRNQ5BIV9 151 aa10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 TEPPQ6URK8 271 aa10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 MOB3BQ86TA1 216 aa10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 STPG3Q8N7X2 389 aa10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 WDR31Q8NA23 367 aa10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 IGKV1D-17A0A075B6S4 117 aa10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 RBFOX2O43251 390 aaKnown RBP eCLIP10.68□□□□□ -0.75e-28■■■■■ 35
HMGCS1-201ENST00000325110 CGAP01215 116 aa10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 MZT1Q08AG7 82 aa10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 IQCJQ1A5X6 159 aa10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 LURAP1LQ8IV03 231 aa10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 CISD2Q8N5K1 135 aaKnown RBP10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 H1FXQ92522 213 aaKnown RBP10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 MGST2Q99735 147 aa10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 GGTLC1Q9BX51 225 aa10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 NPVFQ9HCQ7 196 aa10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 TRGV10A0A0A0MS01 117 aa10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 PMS2P5A8MQ11 134 aa10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 J3QW42 95 aa10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 FOXH1O75593 365 aa10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 CXorf1O96002 111 aa10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 IL6RP08887 468 aaPredicted RBP10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 ZNF134P52741 427 aa10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 RHOBP62745 196 aa10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 NHLRC2Q8NBF2 726 aa10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 OCC1Q8TAD7 63 aa10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 ZGRF1Q86YA3 2104 aa10.68□□□□□ -0.7
HMGCS1-201ENST00000325110 CA2P00918 260 aa10.67□□□□□ -0.7
HMGCS1-201ENST00000325110 IRF2P14316 349 aa10.67□□□□□ -0.7
HMGCS1-201ENST00000325110 SRP14P37108 136 aaKnown RBP10.67□□□□□ -0.7
HMGCS1-201ENST00000325110 CCL8P80075 99 aa10.67□□□□□ -0.7
HMGCS1-201ENST00000325110 TGIF2LYQ8IUE0 185 aa10.67□□□□□ -0.7
HMGCS1-201ENST00000325110 ZCCHC24Q8N2G6 241 aaKnown RBP10.67□□□□□ -0.7
HMGCS1-201ENST00000325110 CMTM2Q8TAZ6 248 aa10.67□□□□□ -0.7
HMGCS1-201ENST00000325110 MISP3Q96FF7 219 aa10.67□□□□□ -0.7
HMGCS1-201ENST00000325110 AGMATQ9BSE5 352 aa10.67□□□□□ -0.7
HMGCS1-201ENST00000325110 CLCF1Q9UBD9 225 aa10.67□□□□□ -0.7
HMGCS1-201ENST00000325110 CACNA1BQ00975 2339 aa10.67□□□□□ -0.7
HMGCS1-201ENST00000325110 WNK2Q9Y3S1 2297 aa10.67□□□□□ -0.7
HMGCS1-201ENST00000325110 ZNF883P0CG24 379 aa10.67□□□□□ -0.7
HMGCS1-201ENST00000325110 DOLPP1Q86YN1 238 aa10.67□□□□□ -0.7
HMGCS1-201ENST00000325110 SNURFLB1AK76 121 aa10.67□□□□□ -0.7
HMGCS1-201ENST00000325110 TMPRSS2O15393 492 aa10.67□□□□□ -0.7
HMGCS1-201ENST00000325110 APELAP0DMC3 54 aa10.67□□□□□ -0.7
HMGCS1-201ENST00000325110 SP5Q6BEB4 398 aaPredicted RBP10.67□□□□□ -0.7
HMGCS1-201ENST00000325110 PRR27Q6MZM9 219 aa10.67□□□□□ -0.7
HMGCS1-201ENST00000325110 MRPL54Q6P161 138 aaKnown RBP10.67□□□□□ -0.7
HMGCS1-201ENST00000325110 OR8I2Q8N0Y5 310 aa10.67□□□□□ -0.7
HMGCS1-201ENST00000325110 GCSAMQ8N6F7 178 aa10.67□□□□□ -0.7
HMGCS1-201ENST00000325110 FAM216BQ8N7L0 139 aa10.67□□□□□ -0.7
HMGCS1-201ENST00000325110 KCNIP2Q9NS61 270 aa10.67□□□□□ -0.7
HMGCS1-201ENST00000325110 SPTAN1Q13813 2472 aaKnown RBP10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 PRR33A8MZF0 331 aa10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 J3QR06 171 aa10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 PROP1O75360 226 aa10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 VENTXO95231 258 aa10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 CRISP2P16562 243 aa10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 CRYBB3P26998 211 aa10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 GCHFRP30047 84 aa10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 ASPHD1Q5U4P2 390 aa10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 OR4A47Q6IF82 309 aa10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 MIR17HGQ75NE6 70 aa10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 SNRNP40Q96DI7 357 aaKnown RBP10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 TBX15Q96SF7 602 aa10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 NAT8BQ9UHF3 227 aa10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 PAM16Q9Y3D7 125 aa10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 AKAP6Q13023 2319 aa10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 SAA2-SAA4A0A096LPE2 208 aa10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 IGKV3-15P01624 115 aa10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 SAA2P0DJI9 122 aaPredicted RBP10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 ADMP35318 185 aa10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 KRTDAPP60985 99 aa10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 SUMO1P63165 101 aaKnown RBP10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 TGIF2LXQ8IUE1 241 aa10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 YTHDF2Q9Y5A9 579 aaKnown RBP10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 GFRA3O60609 400 aa10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 PMCHP20382 165 aa10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 GNG4P50150 75 aa10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 TNFAIP6P98066 277 aaPredicted RBP10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 ACSF3Q4G176 576 aaPredicted RBP10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 PRR31Q5SQ13 230 aa10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 RPRMLQ8N4K4 120 aa10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 OR1L6Q8NGR2 347 aa10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 SLC35D1Q9NTN3 355 aa10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 JPT1Q9UK76 154 aa10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 OR51B2Q9Y5P1 312 aa10.66□□□□□ -0.7
HMGCS1-201ENST00000325110 CFAP47Q6ZTR5 3102 aa10.65□□□□□ -0.7
HMGCS1-201ENST00000325110 C19orf67A6NJJ6 358 aa10.65□□□□□ -0.7
HMGCS1-201ENST00000325110 NTF3P20783 257 aa10.65□□□□□ -0.7
HMGCS1-201ENST00000325110 OR10J1P30954 320 aa10.65□□□□□ -0.7
HMGCS1-201ENST00000325110 TIMP3P35625 211 aa10.65□□□□□ -0.7
HMGCS1-201ENST00000325110 MLANAQ16655 118 aa10.65□□□□□ -0.7
HMGCS1-201ENST00000325110 TRAT1Q6PIZ9 186 aa10.65□□□□□ -0.7
HMGCS1-201ENST00000325110 Q8TCH9 128 aa10.65□□□□□ -0.7
HMGCS1-201ENST00000325110 HES4Q9HCC6 221 aa10.65□□□□□ -0.7
HMGCS1-201ENST00000325110 TRBV20OR9-2A0A075B6H5 130 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms