RNA–Protein interactions for RNA: ENST00000324932.11

NUP98-201, Transcript of nucleoporin 98, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP98, Length 6,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-201ENST00000324932 SHISA3A0PJX4 238 aa12.4□□□□□ -0.42
NUP98-201ENST00000324932 LEAP2Q969E1 77 aa12.4□□□□□ -0.42
NUP98-201ENST00000324932 TRBV7-9A0A0J9YWB2 115 aa12.4□□□□□ -0.42
NUP98-201ENST00000324932 TOGARAM1Q9Y4F4 1720 aa12.4□□□□□ -0.42
NUP98-201ENST00000324932 C9JCJ5 164 aa12.4□□□□□ -0.42
NUP98-201ENST00000324932 PEAR1Q5VY43 1037 aaPredicted RBP12.4□□□□□ -0.42
NUP98-201ENST00000324932 OR52E5Q8NH55 327 aa12.4□□□□□ -0.42
NUP98-201ENST00000324932 COL22A1Q8NFW1 1626 aaPredicted RBP12.4□□□□□ -0.42
NUP98-201ENST00000324932 PTPRZ1P23471 2315 aaPredicted RBP12.4□□□□□ -0.42
NUP98-201ENST00000324932 TFF3Q07654 80 aa12.4□□□□□ -0.42
NUP98-201ENST00000324932 NHP2Q9NX24 153 aaKnown RBP12.4□□□□□ -0.42
NUP98-201ENST00000324932 A0A1W2PQF6 199 aa12.4□□□□□ -0.42
NUP98-201ENST00000324932 IGFBP2P18065 325 aa12.4□□□□□ -0.42
NUP98-201ENST00000324932 FHL5Q5TD97 284 aa12.4□□□□□ -0.42
NUP98-201ENST00000324932 C1orf53Q5VUE5 145 aa12.4□□□□□ -0.42
NUP98-201ENST00000324932 CACNG8Q8WXS5 425 aa12.4□□□□□ -0.42
NUP98-201ENST00000324932 A0A0G2JK05 382 aa12.4□□□□□ -0.43
NUP98-201ENST00000324932 EIF4EBP2Q13542 120 aaPredicted RBP12.4□□□□□ -0.43
NUP98-201ENST00000324932 ZNF525Q8N782 197 aa12.4□□□□□ -0.43
NUP98-201ENST00000324932 C9orf172C9J069 976 aa12.39□□□□□ -0.43
NUP98-201ENST00000324932 FER1L6-AS1Q8NA97 138 aa12.39□□□□□ -0.43
NUP98-201ENST00000324932 CTHRC1Q96CG8 243 aa12.39□□□□□ -0.43
NUP98-201ENST00000324932 SSBP4Q9BWG4 385 aaPredicted RBP12.39□□□□□ -0.43
NUP98-201ENST00000324932 UBE2CO00762 179 aa12.39□□□□□ -0.43
NUP98-201ENST00000324932 CNTFRP26992 372 aa12.39□□□□□ -0.43
NUP98-201ENST00000324932 C19orf48Q6RUI8 117 aa12.39□□□□□ -0.43
NUP98-201ENST00000324932 TIMM23BQ5SRD1 257 aa12.39□□□□□ -0.43
NUP98-201ENST00000324932 LRP5O75197 1615 aa12.39□□□□□ -0.43
NUP98-201ENST00000324932 CRYBA2P53672 197 aa12.39□□□□□ -0.43
NUP98-201ENST00000324932 ACSF3Q4G176 576 aaPredicted RBP12.39□□□□□ -0.43
NUP98-201ENST00000324932 PGPEP1Q9NXJ5 209 aa12.39□□□□□ -0.43
NUP98-201ENST00000324932 OR5AN1Q8NGI8 311 aa12.39□□□□□ -0.43
NUP98-201ENST00000324932 TMEM54Q969K7 222 aa12.39□□□□□ -0.43
NUP98-201ENST00000324932 GDF15Q99988 308 aa12.39□□□□□ -0.43
NUP98-201ENST00000324932 RTBDNQ9BSG5 229 aaPredicted RBP12.39□□□□□ -0.43
NUP98-201ENST00000324932 TRAV14DV4A0A0A6YYC5 116 aa12.38□□□□□ -0.43
NUP98-201ENST00000324932 IGHV3-48P01763 117 aa12.38□□□□□ -0.43
NUP98-201ENST00000324932 ORAOV1Q8WV07 137 aa12.38□□□□□ -0.43
NUP98-201ENST00000324932 RGPD2P0DJD1 1756 aa12.38□□□□□ -0.43
NUP98-201ENST00000324932 CCL20P78556 96 aa12.38□□□□□ -0.43
NUP98-201ENST00000324932 OR2K2Q8NGT1 345 aa12.38□□□□□ -0.43
NUP98-201ENST00000324932 TGFAP01135 160 aa12.38□□□□□ -0.43
NUP98-201ENST00000324932 CELA2AP08217 269 aa12.38□□□□□ -0.43
NUP98-201ENST00000324932 A0A1W2PRS3 328 aa12.38□□□□□ -0.43
NUP98-201ENST00000324932 C12orf77C9JDV5 145 aa12.38□□□□□ -0.43
NUP98-201ENST00000324932 HIGD1CA8MV81 97 aa12.38□□□□□ -0.43
NUP98-201ENST00000324932 CTSSP25774 331 aa12.38□□□□□ -0.43
NUP98-201ENST00000324932 SEC11AP67812 179 aa12.38□□□□□ -0.43
NUP98-201ENST00000324932 LDLRAD2Q5SZI1 272 aa12.38□□□□□ -0.43
NUP98-201ENST00000324932 ELOVL5Q9NYP7 299 aa12.38□□□□□ -0.43
NUP98-201ENST00000324932 RPL39P5Q59GN2 51 aa12.37□□□□□ -0.43
NUP98-201ENST00000324932 A0A1B0GTI1 187 aa12.37□□□□□ -0.43
NUP98-201ENST00000324932 SPRED2Q7Z698 418 aa12.37□□□□□ -0.43
NUP98-201ENST00000324932 FNDC4Q9H6D8 234 aaPredicted RBP12.37□□□□□ -0.43
NUP98-201ENST00000324932 TMEM74BQ9NUR3 256 aa12.37□□□□□ -0.43
NUP98-201ENST00000324932 ZNHIT1O43257 154 aa12.37□□□□□ -0.43
NUP98-201ENST00000324932 HIST1H2BKO60814 126 aa12.37□□□□□ -0.43
NUP98-201ENST00000324932 HIST1H2BJP06899 126 aa12.37□□□□□ -0.43
NUP98-201ENST00000324932 HIST1H2BOP23527 126 aa12.37□□□□□ -0.43
NUP98-201ENST00000324932 HIST1H2BBP33778 126 aa12.37□□□□□ -0.43
NUP98-201ENST00000324932 HIST1H2BDP58876 126 aa12.37□□□□□ -0.43
NUP98-201ENST00000324932 HIST1H2BCP62807 126 aa12.37□□□□□ -0.43
NUP98-201ENST00000324932 IGLV3-21P80748 117 aaPredicted RBP12.37□□□□□ -0.43
NUP98-201ENST00000324932 PLAURQ03405 335 aa12.37□□□□□ -0.43
NUP98-201ENST00000324932 HIST2H2BEQ16778 126 aa12.37□□□□□ -0.43
NUP98-201ENST00000324932 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.37□□□□□ -0.43
NUP98-201ENST00000324932 HIST1H2BHQ93079 126 aa12.37□□□□□ -0.43
NUP98-201ENST00000324932 HIST1H2BNQ99877 126 aa12.37□□□□□ -0.43
NUP98-201ENST00000324932 HIST1H2BMQ99879 126 aa12.37□□□□□ -0.43
NUP98-201ENST00000324932 UCNP55089 124 aa12.37□□□□□ -0.43
NUP98-201ENST00000324932 OSTCQ9NRP0 149 aa12.37□□□□□ -0.43
NUP98-201ENST00000324932 NDUFA3O95167 84 aa12.37□□□□□ -0.43
NUP98-201ENST00000324932 HBDP02042 147 aa12.37□□□□□ -0.43
NUP98-201ENST00000324932 SMIM10L1P0DMW3 83 aa12.37□□□□□ -0.43
NUP98-201ENST00000324932 FOXL2P58012 376 aa12.37□□□□□ -0.43
NUP98-201ENST00000324932 PNKDQ8N490 385 aa12.37□□□□□ -0.43
NUP98-201ENST00000324932 SMIM10Q96HG1 83 aa12.37□□□□□ -0.43
NUP98-201ENST00000324932 DMRTA2Q96SC8 542 aa12.37□□□□□ -0.43
NUP98-201ENST00000324932 SLC25A2Q9BXI2 301 aa12.37□□□□□ -0.43
NUP98-201ENST00000324932 SEMA5BQ9P283 1151 aa12.37□□□□□ -0.43
NUP98-201ENST00000324932 LAMA4Q16363 1823 aa12.36□□□□□ -0.43
NUP98-201ENST00000324932 RNASEH2CQ8TDP1 164 aaKnown RBP12.36□□□□□ -0.43
NUP98-201ENST00000324932 NUP214P35658 2090 aaPredicted RBP12.36□□□□□ -0.43
NUP98-201ENST00000324932 LOC105371242A0A075B767 164 aa12.36□□□□□ -0.43
NUP98-201ENST00000324932 ADMP35318 185 aa12.36□□□□□ -0.43
NUP98-201ENST00000324932 LEPP41159 167 aa12.36□□□□□ -0.43
NUP98-201ENST00000324932 NUTF2P61970 127 aaKnown RBP12.36□□□□□ -0.43
NUP98-201ENST00000324932 ZNF585BQ52M93 769 aa12.36□□□□□ -0.43
NUP98-201ENST00000324932 RREB1Q92766 1687 aa12.36□□□□□ -0.43
NUP98-201ENST00000324932 CKS1BP61024 79 aa12.36□□□□□ -0.43
NUP98-201ENST00000324932 MIR17HGQ75NE6 70 aa12.36□□□□□ -0.43
NUP98-201ENST00000324932 YAE1D1Q9NRH1 226 aa12.36□□□□□ -0.43
NUP98-201ENST00000324932 LAMB1P07942 1786 aa12.36□□□□□ -0.43
NUP98-201ENST00000324932 A8MWV9 139 aa12.35□□□□□ -0.43
NUP98-201ENST00000324932 FGF16O43320 207 aa12.35□□□□□ -0.43
NUP98-201ENST00000324932 PAX2Q02962 417 aa12.35□□□□□ -0.43
NUP98-201ENST00000324932 OR10J3Q5JRS4 329 aa12.35□□□□□ -0.43
NUP98-201ENST00000324932 NRAPQ86VF7 1730 aa12.35□□□□□ -0.43
NUP98-201ENST00000324932 EGR4Q05215 589 aa12.35□□□□□ -0.43
NUP98-201ENST00000324932 SRXN1Q9BYN0 137 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms