RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 NAPSAO96009 420 aa9.89□□□□□ -0.83
DDR1-223ENST00000324771 RAB5AP20339 215 aa9.89□□□□□ -0.83
DDR1-223ENST00000324771 GNG4P50150 75 aa9.89□□□□□ -0.83
DDR1-223ENST00000324771 CNN1P51911 297 aaKnown RBP9.89□□□□□ -0.83
DDR1-223ENST00000324771 RND2P52198 227 aa9.89□□□□□ -0.83
DDR1-223ENST00000324771 UCNP55089 124 aa9.89□□□□□ -0.83
DDR1-223ENST00000324771 HSPE1P61604 102 aaKnown RBP9.89□□□□□ -0.83
DDR1-223ENST00000324771 FAM90A1Q86YD7 464 aa9.89□□□□□ -0.83
DDR1-223ENST00000324771 RCC1LQ96I51 464 aaKnown RBP9.89□□□□□ -0.83
DDR1-223ENST00000324771 PRO3102Q9H379 93 aa9.89□□□□□ -0.83
DDR1-223ENST00000324771 PLSCR4Q9NRQ2 329 aa9.89□□□□□ -0.83
DDR1-223ENST00000324771 JPT1Q9UK76 154 aa9.89□□□□□ -0.83
DDR1-223ENST00000324771 SLC45A2Q9UMX9 530 aa9.89□□□□□ -0.83
DDR1-223ENST00000324771 TIMM9Q9Y5J7 89 aa9.89□□□□□ -0.83
DDR1-223ENST00000324771 IGKV1-6A0A0C4DH72 117 aa9.88□□□□□ -0.83
DDR1-223ENST00000324771 A8MXK9 166 aa9.88□□□□□ -0.83
DDR1-223ENST00000324771 IGHV1-46P01743 117 aa9.88□□□□□ -0.83
DDR1-223ENST00000324771 PAX6P26367 422 aa9.88□□□□□ -0.83
DDR1-223ENST00000324771 FOXL2NBQ6ZUU3 175 aa9.88□□□□□ -0.83
DDR1-223ENST00000324771 GCSAMQ8N6F7 178 aa9.88□□□□□ -0.83
DDR1-223ENST00000324771 WDR31Q8NA23 367 aa9.88□□□□□ -0.83
DDR1-223ENST00000324771 NHLRC2Q8NBF2 726 aa9.88□□□□□ -0.83
DDR1-223ENST00000324771 C1orf162Q8NEQ5 155 aaPredicted RBP9.88□□□□□ -0.83
DDR1-223ENST00000324771 FAM222BQ8WU58 562 aa9.88□□□□□ -0.83
DDR1-223ENST00000324771 COA4Q9NYJ1 87 aa9.88□□□□□ -0.83
DDR1-223ENST00000324771 TRANK1O15050 2925 aa9.88□□□□□ -0.83
DDR1-223ENST00000324771 SERTM2A0A1B0GWG4 89 aa9.88□□□□□ -0.83
DDR1-223ENST00000324771 J3KRW8 73 aa9.88□□□□□ -0.83
DDR1-223ENST00000324771 MYOD1P15172 320 aa9.88□□□□□ -0.83
DDR1-223ENST00000324771 ARL3P36405 182 aa9.88□□□□□ -0.83
DDR1-223ENST00000324771 RPL27AP46776 148 aaKnown RBP9.88□□□□□ -0.83
DDR1-223ENST00000324771 MRPL54Q6P161 138 aaKnown RBP9.88□□□□□ -0.83
DDR1-223ENST00000324771 Q6ZRM9 215 aa9.88□□□□□ -0.83
DDR1-223ENST00000324771 CD177Q8N6Q3 437 aa9.88□□□□□ -0.83
DDR1-223ENST00000324771 OR2T6Q8NHC8 308 aa9.88□□□□□ -0.83
DDR1-223ENST00000324771 C18orf12Q96KH6 178 aa9.88□□□□□ -0.83
DDR1-223ENST00000324771 BARX1Q9HBU1 254 aaPredicted RBP9.88□□□□□ -0.83
DDR1-223ENST00000324771 SLC25A15Q9Y619 301 aa9.88□□□□□ -0.83
DDR1-223ENST00000324771 J3QW42 95 aa9.88□□□□□ -0.83
DDR1-223ENST00000324771 RRHO14718 337 aa9.88□□□□□ -0.83
DDR1-223ENST00000324771 LINC00869P0C866 280 aa9.88□□□□□ -0.83
DDR1-223ENST00000324771 RAB4AP20338 218 aa9.88□□□□□ -0.83
DDR1-223ENST00000324771 SERF2P84101 59 aa9.88□□□□□ -0.83
DDR1-223ENST00000324771 MEF2BQ02080 365 aaPredicted RBP9.88□□□□□ -0.83
DDR1-223ENST00000324771 GCSAMLQ5JQS6 135 aa9.88□□□□□ -0.83
DDR1-223ENST00000324771 KDF1Q8NAX2 398 aaPredicted RBP9.88□□□□□ -0.83
DDR1-223ENST00000324771 ZCCHC14Q8WYQ9 949 aaKnown RBP9.88□□□□□ -0.83
DDR1-223ENST00000324771 WFIKKN1Q96NZ8 548 aa9.88□□□□□ -0.83
DDR1-223ENST00000324771 METTL1Q9UBP6 276 aaKnown RBP9.88□□□□□ -0.83
DDR1-223ENST00000324771 NAT8BQ9UHF3 227 aa9.88□□□□□ -0.83
DDR1-223ENST00000324771 IGHV3OR16-13A0A075B7E8 117 aa9.87□□□□□ -0.83
DDR1-223ENST00000324771 IGHV3-74A0A0B4J1X5 117 aa9.87□□□□□ -0.83
DDR1-223ENST00000324771 A0A0G2JNJ9 132 aa9.87□□□□□ -0.83
DDR1-223ENST00000324771 CEACAM18A8MTB9 384 aa9.87□□□□□ -0.83
DDR1-223ENST00000324771 GNG7O60262 68 aa9.87□□□□□ -0.83
DDR1-223ENST00000324771 KBTBD11O94819 623 aa9.87□□□□□ -0.83
DDR1-223ENST00000324771 CT45A10P0DMU9 189 aa9.87□□□□□ -0.83
DDR1-223ENST00000324771 LHFPL4Q7Z7J7 247 aa9.87□□□□□ -0.83
DDR1-223ENST00000324771 NPIPB3Q92617 1050 aa9.87□□□□□ -0.83
DDR1-223ENST00000324771 Q9UFV3 132 aa9.87□□□□□ -0.83
DDR1-223ENST00000324771 TRAPPC1Q9Y5R8 145 aa9.87□□□□□ -0.83
DDR1-223ENST00000324771 ZNF729A6NN14 1252 aaPredicted RBP9.87□□□□□ -0.83
DDR1-223ENST00000324771 ZNF785A8K8V0 405 aa9.87□□□□□ -0.83
DDR1-223ENST00000324771 IFNL4K9M1U5 179 aa9.87□□□□□ -0.83
DDR1-223ENST00000324771 CA2P00918 260 aa9.87□□□□□ -0.83
DDR1-223ENST00000324771 GGACTQ9BVM4 153 aa9.87□□□□□ -0.83
DDR1-223ENST00000324771 MRPL20Q9BYC9 149 aaKnown RBP9.87□□□□□ -0.83
DDR1-223ENST00000324771 VSIRQ9H7M9 311 aa9.87□□□□□ -0.83
DDR1-223ENST00000324771 LRRK2Q5S007 2527 aa9.87□□□□□ -0.83
DDR1-223ENST00000324771 USP34Q70CQ2 3546 aa9.87□□□□□ -0.83
DDR1-223ENST00000324771 SLC31A2O15432 143 aa9.87□□□□□ -0.83
DDR1-223ENST00000324771 CEACAM3P40198 252 aa9.87□□□□□ -0.83
DDR1-223ENST00000324771 TBR1Q16650 682 aa9.87□□□□□ -0.83
DDR1-223ENST00000324771 KHDC3LQ587J8 217 aa9.87□□□□□ -0.83
DDR1-223ENST00000324771 LSM10Q969L4 123 aaKnown RBP9.87□□□□□ -0.83
DDR1-223ENST00000324771 CLEC5AQ9NY25 188 aa9.87□□□□□ -0.83
DDR1-223ENST00000324771 TMEM56-RWDD3S4R434 201 aa9.87□□□□□ -0.83
DDR1-223ENST00000324771 KBTBD11-OT1A0A1B0GTJ5 212 aa9.86□□□□□ -0.83
DDR1-223ENST00000324771 MOSP00540 346 aa9.86□□□□□ -0.83
DDR1-223ENST00000324771 C10orf55Q5SWW7 151 aa9.86□□□□□ -0.83
DDR1-223ENST00000324771 OR4A47Q6IF82 309 aa9.86□□□□□ -0.83
DDR1-223ENST00000324771 DUX4L9Q6RFH8 374 aaPredicted RBP9.86□□□□□ -0.83
DDR1-223ENST00000324771 Q6ZS92 163 aa9.86□□□□□ -0.83
DDR1-223ENST00000324771 COQ2Q96H96 371 aa9.86□□□□□ -0.83
DDR1-223ENST00000324771 WDR61Q9GZS3 305 aaKnown RBP9.86□□□□□ -0.83
DDR1-223ENST00000324771 NAT8Q9UHE5 227 aa9.86□□□□□ -0.83
DDR1-223ENST00000324771 FUT9Q9Y231 359 aa9.86□□□□□ -0.83
DDR1-223ENST00000324771 SAA2-SAA4A0A096LPE2 208 aa9.86□□□□□ -0.83
DDR1-223ENST00000324771 SAA2P0DJI9 122 aaPredicted RBP9.86□□□□□ -0.83
DDR1-223ENST00000324771 DDTP30046 118 aa9.86□□□□□ -0.83
DDR1-223ENST00000324771 CSN1S1P47710 185 aa9.86□□□□□ -0.83
DDR1-223ENST00000324771 KLRB1Q12918 225 aa9.86□□□□□ -0.83
DDR1-223ENST00000324771 MORN2Q502X0 79 aa9.86□□□□□ -0.83
DDR1-223ENST00000324771 COLCA1Q6ZS62 124 aa9.86□□□□□ -0.83
DDR1-223ENST00000324771 WDR86Q86TI4 376 aa9.86□□□□□ -0.83
DDR1-223ENST00000324771 C1orf174Q8IYL3 243 aa9.86□□□□□ -0.83
DDR1-223ENST00000324771 OR2T10Q8NGZ9 312 aa9.86□□□□□ -0.83
DDR1-223ENST00000324771 FBXL15Q9H469 300 aa9.86□□□□□ -0.83
DDR1-223ENST00000324771 CYTL1Q9NRR1 136 aa9.86□□□□□ -0.83
DDR1-223ENST00000324771 TECRQ9NZ01 308 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms