RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 ERVFRD-1P60508 538 aa10.45□□□□□ -0.74
DDX39A-202ENST00000324340 GNB2P62879 340 aa10.45□□□□□ -0.74
DDX39A-202ENST00000324340 PMS2P11Q13670 270 aa10.45□□□□□ -0.74
DDX39A-202ENST00000324340 ABCA11PQ4W5N1 156 aa10.45□□□□□ -0.74
DDX39A-202ENST00000324340 FAM53AQ6NSI3 398 aaPredicted RBP10.45□□□□□ -0.74
DDX39A-202ENST00000324340 C11orf42Q8N5U0 333 aa10.45□□□□□ -0.74
DDX39A-202ENST00000324340 CCDC71LQ8N9Z2 235 aa10.45□□□□□ -0.74
DDX39A-202ENST00000324340 ZNF439Q8NDP4 499 aa10.45□□□□□ -0.74
DDX39A-202ENST00000324340 OR1P1Q8NH06 330 aa10.45□□□□□ -0.74
DDX39A-202ENST00000324340 RTN4IP1Q8WWV3 396 aaPredicted RBP10.45□□□□□ -0.74
DDX39A-202ENST00000324340 FRZBQ92765 325 aa10.45□□□□□ -0.74
DDX39A-202ENST00000324340 BTF3L4Q96K17 158 aa10.45□□□□□ -0.74
DDX39A-202ENST00000324340 PIMREGQ9BSJ6 248 aa10.45□□□□□ -0.74
DDX39A-202ENST00000324340 SSBP3Q9BWW4 388 aaPredicted RBP10.45□□□□□ -0.74
DDX39A-202ENST00000324340 SUCNR1Q9BXA5 334 aa10.45□□□□□ -0.74
DDX39A-202ENST00000324340 BEX4Q9NWD9 120 aaPredicted RBP10.45□□□□□ -0.74
DDX39A-202ENST00000324340 GNG12Q9UBI6 72 aa10.45□□□□□ -0.74
DDX39A-202ENST00000324340 KIAA1324LA8MWY0 1029 aaPredicted RBP10.44□□□□□ -0.74
DDX39A-202ENST00000324340 MPPED1O15442 326 aa10.44□□□□□ -0.74
DDX39A-202ENST00000324340 MMP9P14780 707 aa10.44□□□□□ -0.74
DDX39A-202ENST00000324340 PCP4P48539 62 aa10.44□□□□□ -0.74
DDX39A-202ENST00000324340 LMO4P61968 165 aa10.44□□□□□ -0.74
DDX39A-202ENST00000324340 C1orf194Q5T5A4 169 aa10.44□□□□□ -0.74
DDX39A-202ENST00000324340 PRAMEF5Q5TYX0 476 aa10.44□□□□□ -0.74
DDX39A-202ENST00000324340 CLEC2AQ6UVW9 174 aa10.44□□□□□ -0.74
DDX39A-202ENST00000324340 CMTM1Q8IZ96 169 aa10.44□□□□□ -0.74
DDX39A-202ENST00000324340 ZNF645Q8N7E2 425 aa10.44□□□□□ -0.74
DDX39A-202ENST00000324340 ZBTB34Q8NCN2 500 aa10.44□□□□□ -0.74
DDX39A-202ENST00000324340 CLDND2Q8NHS1 167 aa10.44□□□□□ -0.74
DDX39A-202ENST00000324340 TMEM18Q96B42 140 aa10.44□□□□□ -0.74
DDX39A-202ENST00000324340 NAA60Q9H7X0 242 aa10.44□□□□□ -0.74
DDX39A-202ENST00000324340 GAB2Q9UQC2 676 aa10.44□□□□□ -0.74
DDX39A-202ENST00000324340 LRRK2Q5S007 2527 aa10.44□□□□□ -0.74
DDX39A-202ENST00000324340 USF3Q68DE3 2245 aa10.44□□□□□ -0.74
DDX39A-202ENST00000324340 PPIAL4CA0A0B4J2A2 164 aa10.43□□□□□ -0.74
DDX39A-202ENST00000324340 KIR2DL5BA0A0G2JN68 375 aa10.43□□□□□ -0.74
DDX39A-202ENST00000324340 KIR2DL5BA0A0G2JPC4 375 aa10.43□□□□□ -0.74
DDX39A-202ENST00000324340 C22orf46C9J442 243 aa10.43□□□□□ -0.74
DDX39A-202ENST00000324340 PITX3O75364 302 aa10.43□□□□□ -0.74
DDX39A-202ENST00000324340 AMBPP02760 352 aa10.43□□□□□ -0.74
DDX39A-202ENST00000324340 RPLP1P05386 114 aaKnown RBP10.43□□□□□ -0.74
DDX39A-202ENST00000324340 PPIAL4GP0DN37 164 aa10.43□□□□□ -0.74
DDX39A-202ENST00000324340 ZNF134P52741 427 aa10.43□□□□□ -0.74
DDX39A-202ENST00000324340 EIF4EBP1Q13541 118 aaPredicted RBP10.43□□□□□ -0.74
DDX39A-202ENST00000324340 LTC4SQ16873 150 aa10.43□□□□□ -0.74
DDX39A-202ENST00000324340 PHLDA2Q53GA4 152 aa10.43□□□□□ -0.74
DDX39A-202ENST00000324340 UTF1Q5T230 341 aa10.43□□□□□ -0.74
DDX39A-202ENST00000324340 SPSB3Q6PJ21 355 aa10.43□□□□□ -0.74
DDX39A-202ENST00000324340 KIR2DL5AQ8N109 375 aa10.43□□□□□ -0.74
DDX39A-202ENST00000324340 LRRC75A-AS1Q8N1F1 130 aa10.43□□□□□ -0.74
DDX39A-202ENST00000324340 C8orf31Q8N9H6 132 aa10.43□□□□□ -0.74
DDX39A-202ENST00000324340 PERPQ96FX8 193 aa10.43□□□□□ -0.74
DDX39A-202ENST00000324340 P2RX4Q99571 388 aa10.43□□□□□ -0.74
DDX39A-202ENST00000324340 SNHG12Q9BXW3 62 aa10.43□□□□□ -0.74
DDX39A-202ENST00000324340 WSB1Q9Y6I7 421 aa10.43□□□□□ -0.74
DDX39A-202ENST00000324340 DCHS2Q6V1P9 2916 aa10.43□□□□□ -0.74
DDX39A-202ENST00000324340 SPTAN1Q13813 2472 aaKnown RBP10.42□□□□□ -0.74
DDX39A-202ENST00000324340 LOC105371242A0A075B767 164 aa10.42□□□□□ -0.74
DDX39A-202ENST00000324340 TGIF2-C20orf24A0A0A6YYL0 155 aa10.42□□□□□ -0.74
DDX39A-202ENST00000324340 A0A1B0GU03 582 aa10.42□□□□□ -0.74
DDX39A-202ENST00000324340 ST8SIA3O43173 380 aa10.42□□□□□ -0.74
DDX39A-202ENST00000324340 PHF1O43189 567 aaPredicted RBP10.42□□□□□ -0.74
DDX39A-202ENST00000324340 PGLYRP1O75594 196 aaPredicted RBP10.42□□□□□ -0.74
DDX39A-202ENST00000324340 LIPFP07098 398 aa10.42□□□□□ -0.74
DDX39A-202ENST00000324340 IGHV1-8P0DP01 117 aa10.42□□□□□ -0.74
DDX39A-202ENST00000324340 S100GP29377 79 aa10.42□□□□□ -0.74
DDX39A-202ENST00000324340 RAB7AP51149 207 aa10.42□□□□□ -0.74
DDX39A-202ENST00000324340 RANP62826 216 aaKnown RBP10.42□□□□□ -0.74
DDX39A-202ENST00000324340 SRPXP78539 464 aa10.42□□□□□ -0.74
DDX39A-202ENST00000324340 ICAM4Q14773 271 aa10.42□□□□□ -0.74
DDX39A-202ENST00000324340 ACOT6Q3I5F7 207 aaPredicted RBP10.42□□□□□ -0.74
DDX39A-202ENST00000324340 CT45A1Q5HYN5 189 aa10.42□□□□□ -0.74
DDX39A-202ENST00000324340 SAPCD1Q5SSQ6 148 aa10.42□□□□□ -0.74
DDX39A-202ENST00000324340 TBC1D26Q86UD7 250 aa10.42□□□□□ -0.74
DDX39A-202ENST00000324340 DRAM1Q8N682 238 aa10.42□□□□□ -0.74
DDX39A-202ENST00000324340 CT45A3Q8NHU0 189 aa10.42□□□□□ -0.74
DDX39A-202ENST00000324340 FAM213BQ8TBF2 198 aa10.42□□□□□ -0.74
DDX39A-202ENST00000324340 ZNF596Q8TC21 504 aa10.42□□□□□ -0.74
DDX39A-202ENST00000324340 MBD6Q96DN6 1003 aa10.42□□□□□ -0.74
DDX39A-202ENST00000324340 OR2D2Q9H210 308 aa10.42□□□□□ -0.74
DDX39A-202ENST00000324340 IFI27L2Q9H2X8 130 aa10.42□□□□□ -0.74
DDX39A-202ENST00000324340 WFDC1Q9HC57 220 aa10.42□□□□□ -0.74
DDX39A-202ENST00000324340 PSG11Q9UQ72 335 aa10.42□□□□□ -0.74
DDX39A-202ENST00000324340 POLR3KQ9Y2Y1 108 aaPredicted RBP10.42□□□□□ -0.74
DDX39A-202ENST00000324340 RBM7Q9Y580 266 aaKnown RBP10.42□□□□□ -0.74
DDX39A-202ENST00000324340 PAX2Q02962 417 aa10.41□□□□□ -0.74
DDX39A-202ENST00000324340 BAXQ07812 192 aa10.41□□□□□ -0.74
DDX39A-202ENST00000324340 COTL1Q14019 142 aa10.41□□□□□ -0.74
DDX39A-202ENST00000324340 TMEM187Q14656 261 aa10.41□□□□□ -0.74
DDX39A-202ENST00000324340 TMEM241Q24JQ0 296 aa10.41□□□□□ -0.74
DDX39A-202ENST00000324340 DEFB113Q30KQ7 82 aa10.41□□□□□ -0.74
DDX39A-202ENST00000324340 GFI1BQ5VTD9 330 aa10.41□□□□□ -0.74
DDX39A-202ENST00000324340 SLC25A48Q6ZT89 311 aaKnown RBP10.41□□□□□ -0.74
DDX39A-202ENST00000324340 CENPVQ7Z7K6 275 aaPredicted RBP10.41□□□□□ -0.74
DDX39A-202ENST00000324340 LINC00311Q8N616 119 aa10.41□□□□□ -0.74
DDX39A-202ENST00000324340 KIR3DL3Q8N743 410 aa10.41□□□□□ -0.74
DDX39A-202ENST00000324340 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.41□□□□□ -0.74
DDX39A-202ENST00000324340 C5orf30Q96GV9 206 aa10.41□□□□□ -0.74
DDX39A-202ENST00000324340 IMMP2LQ96T52 175 aa10.41□□□□□ -0.74
DDX39A-202ENST00000324340 ABHD14AQ9BUJ0 271 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms