RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 OSR1Q8TAX0 266 aaPredicted RBP9.21□□□□□ -0.94
SNRNP200-201ENST00000323853 PLPPR1Q8TBJ4 325 aa9.21□□□□□ -0.94
SNRNP200-201ENST00000323853 PMCHL2Q9BQD1 86 aa9.21□□□□□ -0.94
SNRNP200-201ENST00000323853 SSBP3Q9BWW4 388 aaPredicted RBP9.21□□□□□ -0.94
SNRNP200-201ENST00000323853 FBLN5Q9UBX5 448 aa9.21□□□□□ -0.94
SNRNP200-201ENST00000323853 A0A0A6YYD4 124 aa9.21□□□□□ -0.94
SNRNP200-201ENST00000323853 KBTBD11-OT1A0A1B0GTJ5 212 aa9.21□□□□□ -0.94
SNRNP200-201ENST00000323853 SIAH2O43255 324 aa9.21□□□□□ -0.94
SNRNP200-201ENST00000323853 ZNF525Q8N782 197 aa9.21□□□□□ -0.94
SNRNP200-201ENST00000323853 GATAD1Q8WUU5 269 aa9.21□□□□□ -0.94
SNRNP200-201ENST00000323853 PHLDA3Q9Y5J5 127 aa9.21□□□□□ -0.94
SNRNP200-201ENST00000323853 CELA3BP08861 270 aa9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 OTX1P32242 354 aaPredicted RBP9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 SLC25A34Q6PIV7 304 aa9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 ARID1BQ8NFD5 2236 aaPredicted RBP9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 GCSHP23434 173 aa9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 RAB9AP51151 201 aa9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 IGHV3-48P01763 117 aa9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 PDLIM4P50479 330 aa9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 RTN4RL2Q86UN3 420 aa9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 FMC1Q96HJ9 113 aa9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 TRBV6-7A0A0A0MS04 114 aa9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 EFEMP2O95967 443 aa9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 FABP2P12104 132 aa9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 RNFT1Q5M7Z0 435 aa9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 LY6G6FQ5SQ64 297 aa9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 ANK1P16157 1881 aa9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 GAGE10A6NGK3 116 aa9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 ZNF324O75467 553 aaPredicted RBP9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 HLA-DRB1P01911 266 aa9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 CBLN1P23435 193 aa9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 LTBRP36941 435 aa9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 DLX6P56179 175 aa9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 C2orf83Q53S99 150 aa9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 DNM1P46Q6ZS02 220 aa9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 CCL19Q99731 98 aa9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 LOC102723996A0A087X1L8 192 aa9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 IL4P05112 153 aa9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 LY6EQ16553 131 aa9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 FAM106AQ4KMX7 169 aa9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 LINC01560Q8TB33 94 aa9.2□□□□□ -0.94
SNRNP200-201ENST00000323853 LCN2P80188 198 aa9.19□□□□□ -0.94
SNRNP200-201ENST00000323853 GPR82Q96P67 336 aa9.19□□□□□ -0.94
SNRNP200-201ENST00000323853 CBLN4Q9NTU7 201 aa9.19□□□□□ -0.94
SNRNP200-201ENST00000323853 F8VVB4 439 aa9.19□□□□□ -0.94
SNRNP200-201ENST00000323853 F8VWA3 439 aa9.19□□□□□ -0.94
SNRNP200-201ENST00000323853 IGHV3-23P01764 117 aa9.19□□□□□ -0.94
SNRNP200-201ENST00000323853 ATP5G3P48201 142 aa9.19□□□□□ -0.94
SNRNP200-201ENST00000323853 PSG7Q13046 419 aa9.19□□□□□ -0.94
SNRNP200-201ENST00000323853 ZNF497Q6ZNH5 498 aa9.19□□□□□ -0.94
SNRNP200-201ENST00000323853 SDF2L1Q9HCN8 221 aa9.19□□□□□ -0.94
SNRNP200-201ENST00000323853 RBFOX2O43251 390 aaKnown RBP eCLIP9.19□□□□□ -0.94
SNRNP200-201ENST00000323853 SRSF3P84103 164 aaKnown RBP9.19□□□□□ -0.94
SNRNP200-201ENST00000323853 FAM27E3Q08E93 113 aa9.19□□□□□ -0.94
SNRNP200-201ENST00000323853 SMIM12Q96EX1 92 aa9.19□□□□□ -0.94
SNRNP200-201ENST00000323853 IGKV1-9A0A0C4DH69 117 aa9.19□□□□□ -0.94
SNRNP200-201ENST00000323853 GPX1P07203 203 aa9.19□□□□□ -0.94
SNRNP200-201ENST00000323853 SOD3P08294 240 aa9.19□□□□□ -0.94
SNRNP200-201ENST00000323853 LINC00271P0C7V0 271 aa9.19□□□□□ -0.94
SNRNP200-201ENST00000323853 KCNS1Q96KK3 526 aa9.19□□□□□ -0.94
SNRNP200-201ENST00000323853 FAM201AQ5SY85 155 aa9.19□□□□□ -0.94
SNRNP200-201ENST00000323853 TEX45Q8NA69 505 aa9.19□□□□□ -0.94
SNRNP200-201ENST00000323853 MRPL20Q9BYC9 149 aaKnown RBP9.19□□□□□ -0.94
SNRNP200-201ENST00000323853 NPPCP23582 126 aa9.18□□□□□ -0.94
SNRNP200-201ENST00000323853 ICAM4Q14773 271 aa9.18□□□□□ -0.94
SNRNP200-201ENST00000323853 TCF24Q7RTU0 167 aa9.18□□□□□ -0.94
SNRNP200-201ENST00000323853 REC114Q7Z4M0 266 aa9.18□□□□□ -0.94
SNRNP200-201ENST00000323853 FAM216BQ8N7L0 139 aa9.18□□□□□ -0.94
SNRNP200-201ENST00000323853 FAM57AQ8TBR7 257 aa9.18□□□□□ -0.94
SNRNP200-201ENST00000323853 HIST1H4GQ99525 98 aa9.18□□□□□ -0.94
SNRNP200-201ENST00000323853 PEX7O00628 323 aa9.18□□□□□ -0.94
SNRNP200-201ENST00000323853 ATOH7Q8N100 152 aa9.18□□□□□ -0.94
SNRNP200-201ENST00000323853 PCM1Q15154 2024 aa9.18□□□□□ -0.94
SNRNP200-201ENST00000323853 SLC17A3O00476 420 aa9.18□□□□□ -0.94
SNRNP200-201ENST00000323853 LGALS3P17931 250 aaKnown RBP9.18□□□□□ -0.94
SNRNP200-201ENST00000323853 BSPH1Q075Z2 132 aa9.18□□□□□ -0.94
SNRNP200-201ENST00000323853 KLRB1Q12918 225 aa9.18□□□□□ -0.94
SNRNP200-201ENST00000323853 MIR17HGQ75NE6 70 aa9.18□□□□□ -0.94
SNRNP200-201ENST00000323853 PAQR4Q8N4S7 273 aaPredicted RBP9.18□□□□□ -0.94
SNRNP200-201ENST00000323853 NPIPB6E9PJ23 425 aa9.18□□□□□ -0.94
SNRNP200-201ENST00000323853 MEF2CQ06413 473 aaPredicted RBP9.18□□□□□ -0.94
SNRNP200-201ENST00000323853 CSRP2Q16527 193 aa9.18□□□□□ -0.94
SNRNP200-201ENST00000323853 WBP1Q96G27 269 aa9.18□□□□□ -0.94
SNRNP200-201ENST00000323853 C7orf71A4D174 169 aa9.18□□□□□ -0.94
SNRNP200-201ENST00000323853 GPX4P36969 197 aaPredicted RBP9.18□□□□□ -0.94
SNRNP200-201ENST00000323853 TBR1Q16650 682 aa9.18□□□□□ -0.94
SNRNP200-201ENST00000323853 FAM89BQ8N5H3 189 aa9.18□□□□□ -0.94
SNRNP200-201ENST00000323853 DUX5Q96PT3 197 aa9.18□□□□□ -0.94
SNRNP200-201ENST00000323853 DCTN5Q9BTE1 182 aa9.18□□□□□ -0.94
SNRNP200-201ENST00000323853 PDE4DIPQ5VU43 2346 aa9.18□□□□□ -0.94
SNRNP200-201ENST00000323853 TRAV9-1A0A075B6T8 112 aa9.17□□□□□ -0.94
SNRNP200-201ENST00000323853 IGKV1D-13A0A0B4J2D9 117 aa9.17□□□□□ -0.94
SNRNP200-201ENST00000323853 FOXI3A8MTJ6 420 aaPredicted RBP9.17□□□□□ -0.94
SNRNP200-201ENST00000323853 CLPSP04118 112 aa9.17□□□□□ -0.94
SNRNP200-201ENST00000323853 IGKV1-13P0DP09 117 aa9.17□□□□□ -0.94
SNRNP200-201ENST00000323853 SAPCD1Q5SSQ6 148 aa9.17□□□□□ -0.94
SNRNP200-201ENST00000323853 C19orf54Q5BKX5 351 aa9.17□□□□□ -0.94
SNRNP200-201ENST00000323853 ATRAIDQ6UW56 229 aa9.17□□□□□ -0.94
SNRNP200-201ENST00000323853 TMEM136Q6ZRR5 245 aa9.17□□□□□ -0.94
SNRNP200-201ENST00000323853 OR4D5Q8NGN0 318 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms