RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 SLC24A4Q8NFF2 622 aa11.3□□□□□ -0.6
SRRM1-201ENST00000323848 HES4Q9HCC6 221 aa11.3□□□□□ -0.6
SRRM1-201ENST00000323848 TUBG2Q9NRH3 451 aa11.3□□□□□ -0.6
SRRM1-201ENST00000323848 MDFIC2A0A1B0GVS7 189 aa11.29□□□□□ -0.6
SRRM1-201ENST00000323848 MALSU1Q96EH3 234 aa11.29□□□□□ -0.6
SRRM1-201ENST00000323848 FAM103A1Q9BTL3 118 aaKnown RBP11.29□□□□□ -0.6
SRRM1-201ENST00000323848 MRPL20Q9BYC9 149 aaKnown RBP11.29□□□□□ -0.6
SRRM1-201ENST00000323848 IDI2-AS1Q9NZ38 188 aa11.29□□□□□ -0.6
SRRM1-201ENST00000323848 CXorf65A6NEN9 183 aa11.29□□□□□ -0.6
SRRM1-201ENST00000323848 TSTD3H0UI37 97 aa11.29□□□□□ -0.6
SRRM1-201ENST00000323848 RRHO14718 337 aa11.29□□□□□ -0.6
SRRM1-201ENST00000323848 FAM157CP0CG43 387 aa11.29□□□□□ -0.6
SRRM1-201ENST00000323848 HMGN3Q15651 99 aa11.29□□□□□ -0.6
SRRM1-201ENST00000323848 OR51G1Q8NGK1 321 aa11.29□□□□□ -0.6
SRRM1-201ENST00000323848 EAF1Q96JC9 268 aaPredicted RBP11.29□□□□□ -0.6
SRRM1-201ENST00000323848 IGKV1-39P01597 117 aa11.29□□□□□ -0.6
SRRM1-201ENST00000323848 IGKV1D-39P04432 117 aa11.29□□□□□ -0.6
SRRM1-201ENST00000323848 OR10J1P30954 320 aa11.29□□□□□ -0.6
SRRM1-201ENST00000323848 HTD2P86397 168 aa11.29□□□□□ -0.6
SRRM1-201ENST00000323848 UHRF2Q96PU4 802 aa11.29□□□□□ -0.6
SRRM1-201ENST00000323848 ZNF835Q9Y2P0 537 aa11.29□□□□□ -0.6
SRRM1-201ENST00000323848 PGPEP1LA6NFU8 196 aa11.28□□□□□ -0.6
SRRM1-201ENST00000323848 COX7A2P2O60397 106 aa11.28□□□□□ -0.6
SRRM1-201ENST00000323848 ADIPOQQ15848 244 aa11.28□□□□□ -0.6
SRRM1-201ENST00000323848 PNKDQ8N490 385 aa11.28□□□□□ -0.6
SRRM1-201ENST00000323848 NHLRC2Q8NBF2 726 aa11.28□□□□□ -0.6
SRRM1-201ENST00000323848 OR1B1Q8NGR6 318 aa11.28□□□□□ -0.6
SRRM1-201ENST00000323848 ZCCHC14Q8WYQ9 949 aaKnown RBP11.28□□□□□ -0.6
SRRM1-201ENST00000323848 IL19Q9UHD0 177 aa11.28□□□□□ -0.6
SRRM1-201ENST00000323848 KBTBD11-OT1A0A1B0GTJ5 212 aa11.28□□□□□ -0.6
SRRM1-201ENST00000323848 FABP4P15090 132 aa11.28□□□□□ -0.6
SRRM1-201ENST00000323848 ADCYAP1P18509 176 aa11.28□□□□□ -0.6
SRRM1-201ENST00000323848 VMA21Q3ZAQ7 101 aa11.28□□□□□ -0.6
SRRM1-201ENST00000323848 UTF1Q5T230 341 aa11.28□□□□□ -0.6
SRRM1-201ENST00000323848 OR4A47Q6IF82 309 aa11.28□□□□□ -0.6
SRRM1-201ENST00000323848 TRAT1Q6PIZ9 186 aa11.28□□□□□ -0.6
SRRM1-201ENST00000323848 ZNF383Q8NA42 475 aa11.28□□□□□ -0.6
SRRM1-201ENST00000323848 RAB1BQ9H0U4 201 aa11.28□□□□□ -0.6
SRRM1-201ENST00000323848 PXMP4Q9Y6I8 212 aa11.28□□□□□ -0.6
SRRM1-201ENST00000323848 C1QTNF9BB2RNN3 333 aa11.28□□□□□ -0.6
SRRM1-201ENST00000323848 NDUFB4O95168 129 aa11.28□□□□□ -0.6
SRRM1-201ENST00000323848 C1QTNF9P0C862 333 aa11.28□□□□□ -0.6
SRRM1-201ENST00000323848 PRR31Q5SQ13 230 aa11.28□□□□□ -0.6
SRRM1-201ENST00000323848 RNASE6Q93091 150 aaKnown RBP11.28□□□□□ -0.6
SRRM1-201ENST00000323848 TOLLIPQ9H0E2 274 aa11.28□□□□□ -0.6
SRRM1-201ENST00000323848 IGKV3-7A0A075B6H7 116 aa11.27□□□□□ -0.6
SRRM1-201ENST00000323848 ZNF320A2RRD8 509 aa11.27□□□□□ -0.6
SRRM1-201ENST00000323848 ZNF705FA8MVS1 300 aaPredicted RBP11.27□□□□□ -0.6
SRRM1-201ENST00000323848 NUDT19A8MXV4 375 aa11.27□□□□□ -0.6
SRRM1-201ENST00000323848 CA2P00918 260 aa11.27□□□□□ -0.6
SRRM1-201ENST00000323848 IGKV1-16P04430 117 aa11.27□□□□□ -0.6
SRRM1-201ENST00000323848 ACAA1P09110 424 aaPredicted RBP11.27□□□□□ -0.6
SRRM1-201ENST00000323848 ZNF705DP0CH99 300 aaPredicted RBP11.27□□□□□ -0.6
SRRM1-201ENST00000323848 ZNF705BP0CI00 300 aaPredicted RBP11.27□□□□□ -0.6
SRRM1-201ENST00000323848 TIMP3P35625 211 aa11.27□□□□□ -0.6
SRRM1-201ENST00000323848 CT45A1Q5HYN5 189 aa11.27□□□□□ -0.6
SRRM1-201ENST00000323848 CT45A3Q8NHU0 189 aa11.27□□□□□ -0.6
SRRM1-201ENST00000323848 CHD3Q12873 2000 aaKnown RBP11.27□□□□□ -0.61
SRRM1-201ENST00000323848 PPP5D1E7EU14 171 aa11.27□□□□□ -0.61
SRRM1-201ENST00000323848 DUTP33316 252 aaKnown RBP11.27□□□□□ -0.61
SRRM1-201ENST00000323848 FAM3BP58499 235 aaPredicted RBP11.27□□□□□ -0.61
SRRM1-201ENST00000323848 RAB1CQ92928 201 aa11.27□□□□□ -0.61
SRRM1-201ENST00000323848 PPIAL4CA0A0B4J2A2 164 aa11.27□□□□□ -0.61
SRRM1-201ENST00000323848 IFNL4K9M1U5 179 aa11.27□□□□□ -0.61
SRRM1-201ENST00000323848 PPIAL4GP0DN37 164 aa11.27□□□□□ -0.61
SRRM1-201ENST00000323848 ZNF134P52741 427 aa11.27□□□□□ -0.61
SRRM1-201ENST00000323848 ZNF525Q8N782 197 aa11.27□□□□□ -0.61
SRRM1-201ENST00000323848 JPT1Q9UK76 154 aa11.27□□□□□ -0.61
SRRM1-201ENST00000323848 J3QW42 95 aa11.26□□□□□ -0.61
SRRM1-201ENST00000323848 SUMO1P63165 101 aaKnown RBP11.26□□□□□ -0.61
SRRM1-201ENST00000323848 TMEM241Q24JQ0 296 aa11.26□□□□□ -0.61
SRRM1-201ENST00000323848 ZNF66Q6ZN08 573 aa11.26□□□□□ -0.61
SRRM1-201ENST00000323848 C11orf53Q8IXP5 236 aa11.26□□□□□ -0.61
SRRM1-201ENST00000323848 ZBTB34Q8NCN2 500 aa11.26□□□□□ -0.61
SRRM1-201ENST00000323848 SMIM8Q96KF7 97 aa11.26□□□□□ -0.61
SRRM1-201ENST00000323848 WDR61Q9GZS3 305 aaKnown RBP11.26□□□□□ -0.61
SRRM1-201ENST00000323848 KIAA1456Q9P272 454 aa11.26□□□□□ -0.61
SRRM1-201ENST00000323848 TMEM41BQ5BJD5 291 aa11.26□□□□□ -0.61
SRRM1-201ENST00000323848 SLC35E3Q7Z769 313 aa11.26□□□□□ -0.61
SRRM1-201ENST00000323848 ZNF561Q8N587 486 aa11.26□□□□□ -0.61
SRRM1-201ENST00000323848 GINS3Q9BRX5 216 aa11.26□□□□□ -0.61
SRRM1-201ENST00000323848 MOSP00540 346 aa11.26□□□□□ -0.61
SRRM1-201ENST00000323848 S100A8P05109 93 aa11.26□□□□□ -0.61
SRRM1-201ENST00000323848 BCL2P10415 239 aa11.26□□□□□ -0.61
SRRM1-201ENST00000323848 LYZP61626 148 aa11.26□□□□□ -0.61
SRRM1-201ENST00000323848 RPL11P62913 178 aaKnown RBP11.26□□□□□ -0.61
SRRM1-201ENST00000323848 TCEAL7Q9BRU2 100 aa11.26□□□□□ -0.61
SRRM1-201ENST00000323848 CEACAM18A8MTB9 384 aa11.25□□□□□ -0.61
SRRM1-201ENST00000323848 PPP1R2P9O14990 202 aa11.25□□□□□ -0.61
SRRM1-201ENST00000323848 LCN2P80188 198 aa11.25□□□□□ -0.61
SRRM1-201ENST00000323848 COL4A2P08572 1712 aa11.25□□□□□ -0.61
SRRM1-201ENST00000323848 IGHV3OR16-13A0A075B7E8 117 aa11.25□□□□□ -0.61
SRRM1-201ENST00000323848 IGHV3-74A0A0B4J1X5 117 aa11.25□□□□□ -0.61
SRRM1-201ENST00000323848 DUXBA0A1W2PPF3 345 aa11.25□□□□□ -0.61
SRRM1-201ENST00000323848 SUB1P53999 127 aaKnown RBP eCLIP11.25□□□□□ -0.61
SRRM1-201ENST00000323848 ERVFC1-1P60608 527 aa11.25□□□□□ -0.61
SRRM1-201ENST00000323848 RANP62826 216 aaKnown RBP11.25□□□□□ -0.61
SRRM1-201ENST00000323848 ZNF90Q03938 601 aa11.25□□□□□ -0.61
SRRM1-201ENST00000323848 OR8B3Q8NGG8 313 aa11.25□□□□□ -0.61
SRRM1-201ENST00000323848 LSM10Q969L4 123 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms