RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 ELLP55199 621 aaPredicted RBP13.82□□□□□ -0.2
SSR4-201ENST00000320857 DLK1P80370 383 aa13.82□□□□□ -0.2
SSR4-201ENST00000320857 WDR25Q64LD2 544 aaPredicted RBP13.82□□□□□ -0.2
SSR4-201ENST00000320857 OR4C13Q8NGP0 309 aa13.82□□□□□ -0.2
SSR4-201ENST00000320857 RCC1LQ96I51 464 aaKnown RBP13.82□□□□□ -0.2
SSR4-201ENST00000320857 WASHC3Q9Y3C0 194 aa13.82□□□□□ -0.2
SSR4-201ENST00000320857 DNASE2O00115 360 aaPredicted RBP13.82□□□□□ -0.2
SSR4-201ENST00000320857 RRHO14718 337 aa13.82□□□□□ -0.2
SSR4-201ENST00000320857 SOX15O60248 233 aa13.82□□□□□ -0.2
SSR4-201ENST00000320857 IFNA4P05014 189 aa13.82□□□□□ -0.2
SSR4-201ENST00000320857 MC5RP33032 325 aa13.82□□□□□ -0.2
SSR4-201ENST00000320857 PRCDQ00LT1 54 aa13.82□□□□□ -0.2
SSR4-201ENST00000320857 ZNF506Q5JVG8 444 aa13.82□□□□□ -0.2
SSR4-201ENST00000320857 ZNF787Q6DD87 383 aa13.82□□□□□ -0.2
SSR4-201ENST00000320857 SLC24A4Q8NFF2 622 aa13.82□□□□□ -0.2
SSR4-201ENST00000320857 OR4A5Q8NH83 315 aa13.82□□□□□ -0.2
SSR4-201ENST00000320857 VSTM2AQ8TAG5 236 aa13.82□□□□□ -0.2
SSR4-201ENST00000320857 NPCDR1Q9BY65 106 aa13.82□□□□□ -0.2
SSR4-201ENST00000320857 PLEKHA3Q9HB20 300 aa13.82□□□□□ -0.2
SSR4-201ENST00000320857 WDR83OSQ9Y284 106 aa13.82□□□□□ -0.2
SSR4-201ENST00000320857 ABCA4P78363 2273 aa13.81□□□□□ -0.2
SSR4-201ENST00000320857 C19orf84I3L1E1 186 aa13.81□□□□□ -0.2
SSR4-201ENST00000320857 MPDU1O75352 247 aa13.81□□□□□ -0.2
SSR4-201ENST00000320857 IGFBP2P18065 325 aa13.81□□□□□ -0.2
SSR4-201ENST00000320857 NPY1RP25929 384 aa13.81□□□□□ -0.2
SSR4-201ENST00000320857 ATP5IP56385 69 aaPredicted RBP13.81□□□□□ -0.2
SSR4-201ENST00000320857 SRSF1Q07955 248 aaKnown RBP eCLIP13.81□□□□□ -0.2
SSR4-201ENST00000320857 OR5B3Q8NH48 314 aa13.81□□□□□ -0.2
SSR4-201ENST00000320857 RARRES2Q99969 163 aa13.81□□□□□ -0.2
SSR4-201ENST00000320857 HINT2Q9BX68 163 aa13.81□□□□□ -0.2
SSR4-201ENST00000320857 CHODLQ9H9P2 273 aa13.81□□□□□ -0.2
SSR4-201ENST00000320857 UNKLQ9H9P5 680 aaKnown RBP13.81□□□□□ -0.2
SSR4-201ENST00000320857 IGHV2-26A0A0B4J1V2 119 aa13.8□□□□□ -0.2
SSR4-201ENST00000320857 F12P00748 615 aaPredicted RBP13.8□□□□□ -0.2
SSR4-201ENST00000320857 RNF224P0DH78 156 aa13.8□□□□□ -0.2
SSR4-201ENST00000320857 ZNF726P1Q15940 193 aa13.8□□□□□ -0.2
SSR4-201ENST00000320857 HAGHQ16775 308 aa13.8□□□□□ -0.2
SSR4-201ENST00000320857 FFAR4Q5NUL3 377 aa13.8□□□□□ -0.2
SSR4-201ENST00000320857 LCN15Q6UWW0 184 aa13.8□□□□□ -0.2
SSR4-201ENST00000320857 CLRN3Q8NCR9 226 aa13.8□□□□□ -0.2
SSR4-201ENST00000320857 CLDND2Q8NHS1 167 aa13.8□□□□□ -0.2
SSR4-201ENST00000320857 CLEC7AQ9BXN2 247 aa13.8□□□□□ -0.2
SSR4-201ENST00000320857 SLC39A9Q9NUM3 307 aa13.8□□□□□ -0.2
SSR4-201ENST00000320857 TEX50A0A1B0GTY4 177 aa13.79□□□□□ -0.2
SSR4-201ENST00000320857 A0A1W2PPR1 153 aa13.79□□□□□ -0.2
SSR4-201ENST00000320857 SMCO3A2RU48 225 aa13.79□□□□□ -0.2
SSR4-201ENST00000320857 PRSS46E5RG02 174 aa13.79□□□□□ -0.2
SSR4-201ENST00000320857 LY6HO94772 140 aa13.79□□□□□ -0.2
SSR4-201ENST00000320857 LIPFP07098 398 aa13.79□□□□□ -0.2
SSR4-201ENST00000320857 USF1P22415 310 aaPredicted RBP13.79□□□□□ -0.2
SSR4-201ENST00000320857 NPBWR1P48145 328 aa13.79□□□□□ -0.2
SSR4-201ENST00000320857 DIAPH2-AS1Q14236 149 aa13.79□□□□□ -0.2
SSR4-201ENST00000320857 HLA-DRB5Q30154 266 aa13.79□□□□□ -0.2
SSR4-201ENST00000320857 KHDC3LQ587J8 217 aa13.79□□□□□ -0.2
SSR4-201ENST00000320857 ACSM6Q6P461 480 aa13.79□□□□□ -0.2
SSR4-201ENST00000320857 LY6G5BQ8NDX9 201 aa13.79□□□□□ -0.2
SSR4-201ENST00000320857 BEND2Q8NDZ0 799 aa13.79□□□□□ -0.2
SSR4-201ENST00000320857 TMEM170AQ8WVE7 144 aa13.79□□□□□ -0.2
SSR4-201ENST00000320857 SPTBN1Q01082 2364 aaKnown RBP13.79□□□□□ -0.2
SSR4-201ENST00000320857 MAP1LC3B2A6NCE7 125 aa13.79□□□□□ -0.2
SSR4-201ENST00000320857 FAM74A7A6NL05 159 aa13.79□□□□□ -0.2
SSR4-201ENST00000320857 TSPAN4O14817 238 aa13.79□□□□□ -0.2
SSR4-201ENST00000320857 NUPL2O15504 423 aaKnown RBP13.79□□□□□ -0.2
SSR4-201ENST00000320857 HSPB1P04792 205 aaKnown RBP13.79□□□□□ -0.2
SSR4-201ENST00000320857 FAM74A3Q4VXF1 159 aa13.79□□□□□ -0.2
SSR4-201ENST00000320857 OR10G4Q8NGN3 311 aa13.79□□□□□ -0.2
SSR4-201ENST00000320857 OR10G9Q8NGN4 311 aa13.79□□□□□ -0.2
SSR4-201ENST00000320857 OR10G7Q8NGN6 311 aa13.79□□□□□ -0.2
SSR4-201ENST00000320857 TMEM167AQ8TBQ9 72 aa13.79□□□□□ -0.2
SSR4-201ENST00000320857 ACTR3CQ9C0K3 210 aaPredicted RBP13.79□□□□□ -0.2
SSR4-201ENST00000320857 MAP1LC3BQ9GZQ8 125 aa13.79□□□□□ -0.2
SSR4-201ENST00000320857 PATZ1Q9HBE1 687 aaKnown RBP13.79□□□□□ -0.2
SSR4-201ENST00000320857 AMMECR1Q9Y4X0 333 aaPredicted RBP13.79□□□□□ -0.2
SSR4-201ENST00000320857 UBR5O95071 2799 aaPredicted RBP13.78□□□□□ -0.2
SSR4-201ENST00000320857 CTXND1A0A1B0GTU2 59 aa13.78□□□□□ -0.2
SSR4-201ENST00000320857 LOC102723971A0A1B0GUV8 181 aa13.78□□□□□ -0.2
SSR4-201ENST00000320857 CA2P00918 260 aa13.78□□□□□ -0.2
SSR4-201ENST00000320857 IFNA1P01562 189 aa13.78□□□□□ -0.2
SSR4-201ENST00000320857 IGLV1-47P01700 117 aa13.78□□□□□ -0.2
SSR4-201ENST00000320857 OR13C7P0DN81 318 aa13.78□□□□□ -0.2
SSR4-201ENST00000320857 MYOD1P15172 320 aa13.78□□□□□ -0.2
SSR4-201ENST00000320857 RPL8P62917 257 aaKnown RBP13.78□□□□□ -0.2
SSR4-201ENST00000320857 HNF4GQ14541 408 aa13.78□□□□□ -0.2
SSR4-201ENST00000320857 ICAM4Q14773 271 aa13.78□□□□□ -0.2
SSR4-201ENST00000320857 ACOT6Q3I5F7 207 aaPredicted RBP13.78□□□□□ -0.2
SSR4-201ENST00000320857 VMA21Q3ZAQ7 101 aa13.78□□□□□ -0.2
SSR4-201ENST00000320857 SOHLH1Q5JUK2 328 aa13.78□□□□□ -0.2
SSR4-201ENST00000320857 RPP25LQ8N5L8 163 aaKnown RBP13.78□□□□□ -0.2
SSR4-201ENST00000320857 OR1L8Q8NGR8 309 aa13.78□□□□□ -0.2
SSR4-201ENST00000320857 COMMD5Q9GZQ3 224 aa13.78□□□□□ -0.2
SSR4-201ENST00000320857 MYO18BQ8IUG5 2567 aa13.78□□□□□ -0.2
SSR4-201ENST00000320857 CYB5BO43169 146 aa13.77□□□□□ -0.21
SSR4-201ENST00000320857 SRP19P09132 144 aaKnown RBP13.77□□□□□ -0.21
SSR4-201ENST00000320857 LGALS7P47929 136 aa13.77□□□□□ -0.21
SSR4-201ENST00000320857 UBTD1Q9HAC8 227 aa13.77□□□□□ -0.21
SSR4-201ENST00000320857 NPVFQ9HCQ7 196 aa13.77□□□□□ -0.21
SSR4-201ENST00000320857 KCNIP2Q9NS61 270 aa13.77□□□□□ -0.21
SSR4-201ENST00000320857 GNG13Q9P2W3 67 aa13.77□□□□□ -0.21
SSR4-201ENST00000320857 ONECUT1Q9UBC0 465 aa13.77□□□□□ -0.21
SSR4-201ENST00000320857 FNDC10F2Z333 226 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms