RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 IGKV1-33P01594 117 aa13.04□□□□□ -0.32
SHISA2-201ENST00000319420 TLE4Q04727 773 aa13.04□□□□□ -0.32
SHISA2-201ENST00000319420 CELSR1Q9NYQ6 3014 aa13.04□□□□□ -0.32
SHISA2-201ENST00000319420 A0A1B0GW64 132 aa13.03□□□□□ -0.32
SHISA2-201ENST00000319420 SCAF4O95104 1147 aaKnown RBP13.03□□□□□ -0.32
SHISA2-201ENST00000319420 CYB561D1Q8N8Q1 229 aa13.03□□□□□ -0.32
SHISA2-201ENST00000319420 FAM122AQ96E09 287 aa13.03□□□□□ -0.32
SHISA2-201ENST00000319420 SMCO4Q9NRQ5 59 aa13.03□□□□□ -0.32
SHISA2-201ENST00000319420 SOX15O60248 233 aa13.03□□□□□ -0.32
SHISA2-201ENST00000319420 ZNF439Q8NDP4 499 aa13.03□□□□□ -0.32
SHISA2-201ENST00000319420 OR13D1Q8NGV5 346 aa13.03□□□□□ -0.32
SHISA2-201ENST00000319420 A0A1W2PPE2 198 aa13.03□□□□□ -0.32
SHISA2-201ENST00000319420 APELAP0DMC3 54 aa13.03□□□□□ -0.32
SHISA2-201ENST00000319420 COX7A1P24310 79 aa13.03□□□□□ -0.32
SHISA2-201ENST00000319420 LOXP28300 417 aaPredicted RBP13.03□□□□□ -0.32
SHISA2-201ENST00000319420 RELBQ01201 579 aa13.03□□□□□ -0.32
SHISA2-201ENST00000319420 GCSAMLQ5JQS6 135 aa13.03□□□□□ -0.32
SHISA2-201ENST00000319420 RCC1LQ96I51 464 aaKnown RBP13.03□□□□□ -0.32
SHISA2-201ENST00000319420 C15orf62A8K5M9 175 aa13.02□□□□□ -0.33
SHISA2-201ENST00000319420 ENSAO43768 121 aaKnown RBP13.02□□□□□ -0.33
SHISA2-201ENST00000319420 SLC25A48Q6ZT89 311 aaKnown RBP13.02□□□□□ -0.33
SHISA2-201ENST00000319420 DDB2Q92466 427 aa13.02□□□□□ -0.33
SHISA2-201ENST00000319420 TMPRSS5Q9H3S3 457 aa13.02□□□□□ -0.33
SHISA2-201ENST00000319420 RAB9BQ9NP90 201 aa13.02□□□□□ -0.33
SHISA2-201ENST00000319420 TCF19Q9Y242 345 aa13.02□□□□□ -0.33
SHISA2-201ENST00000319420 USP9XQ93008 2570 aaPredicted RBP13.02□□□□□ -0.33
SHISA2-201ENST00000319420 A0A1W2PPH5 198 aa13.02□□□□□ -0.33
SHISA2-201ENST00000319420 SOD3P08294 240 aa13.02□□□□□ -0.33
SHISA2-201ENST00000319420 OR8U8P0C7N1 319 aa13.02□□□□□ -0.33
SHISA2-201ENST00000319420 DEFA6Q01524 100 aa13.02□□□□□ -0.33
SHISA2-201ENST00000319420 HIPK2Q9H2X6 1198 aa13.02□□□□□ -0.33
SHISA2-201ENST00000319420 CSMD2Q7Z408 3487 aa13.02□□□□□ -0.33
SHISA2-201ENST00000319420 A0A1W2PRD5 423 aa13.01□□□□□ -0.33
SHISA2-201ENST00000319420 A0A1W2PRF3 423 aa13.01□□□□□ -0.33
SHISA2-201ENST00000319420 A0A1W2PRM7 423 aa13.01□□□□□ -0.33
SHISA2-201ENST00000319420 NDUFS7O75251 213 aa13.01□□□□□ -0.33
SHISA2-201ENST00000319420 S100A8P05109 93 aa13.01□□□□□ -0.33
SHISA2-201ENST00000319420 ZNF672Q499Z4 452 aaPredicted RBP13.01□□□□□ -0.33
SHISA2-201ENST00000319420 ZNF787Q6DD87 383 aa13.01□□□□□ -0.33
SHISA2-201ENST00000319420 ACSM6Q6P461 480 aa13.01□□□□□ -0.33
SHISA2-201ENST00000319420 HIST1H2BAQ96A08 127 aa13.01□□□□□ -0.33
SHISA2-201ENST00000319420 ZNF727A8MUV8 499 aa13.01□□□□□ -0.33
SHISA2-201ENST00000319420 GNLYP22749 145 aa13.01□□□□□ -0.33
SHISA2-201ENST00000319420 THBS3P49746 956 aa13.01□□□□□ -0.33
SHISA2-201ENST00000319420 ZNF506Q5JVG8 444 aa13.01□□□□□ -0.33
SHISA2-201ENST00000319420 HEPN1Q6WQI6 88 aa13.01□□□□□ -0.33
SHISA2-201ENST00000319420 RPP25LQ8N5L8 163 aaKnown RBP13.01□□□□□ -0.33
SHISA2-201ENST00000319420 BTBD17A6NE02 478 aa13□□□□□ -0.33
SHISA2-201ENST00000319420 H3BQ15 152 aa13□□□□□ -0.33
SHISA2-201ENST00000319420 CDKN1AP38936 164 aa13□□□□□ -0.33
SHISA2-201ENST00000319420 SSX2Q16385 188 aa13□□□□□ -0.33
SHISA2-201ENST00000319420 FFAR4Q5NUL3 377 aa13□□□□□ -0.33
SHISA2-201ENST00000319420 TCTEX1D1Q8N7M0 179 aa13□□□□□ -0.33
SHISA2-201ENST00000319420 HARBI1Q96MB7 349 aa13□□□□□ -0.33
SHISA2-201ENST00000319420 CIB3Q96Q77 187 aaPredicted RBP13□□□□□ -0.33
SHISA2-201ENST00000319420 PSMG3Q9BT73 122 aaPredicted RBP13□□□□□ -0.33
SHISA2-201ENST00000319420 IGHV3-48P01763 117 aa13□□□□□ -0.33
SHISA2-201ENST00000319420 FAM24BQ8N5W8 94 aa13□□□□□ -0.33
SHISA2-201ENST00000319420 ZNF709Q8N972 641 aa13□□□□□ -0.33
SHISA2-201ENST00000319420 OR10W1Q8NGF6 305 aa13□□□□□ -0.33
SHISA2-201ENST00000319420 SSMEM1Q8WWF3 244 aa13□□□□□ -0.33
SHISA2-201ENST00000319420 SPCS3P61009 180 aa12.99□□□□□ -0.33
SHISA2-201ENST00000319420 RTL8BQ17RB0 113 aa12.99□□□□□ -0.33
SHISA2-201ENST00000319420 DPPA3Q6W0C5 159 aa12.99□□□□□ -0.33
SHISA2-201ENST00000319420 MOB3BQ86TA1 216 aa12.99□□□□□ -0.33
SHISA2-201ENST00000319420 TMEM147Q9BVK8 224 aa12.99□□□□□ -0.33
SHISA2-201ENST00000319420 PATZ1Q9HBE1 687 aaKnown RBP12.99□□□□□ -0.33
SHISA2-201ENST00000319420 LOC102723971A0A1B0GUV8 181 aa12.99□□□□□ -0.33
SHISA2-201ENST00000319420 hCG_1809904A0A1W2PP81 198 aa12.99□□□□□ -0.33
SHISA2-201ENST00000319420 A0A1W2PR64 198 aa12.99□□□□□ -0.33
SHISA2-201ENST00000319420 A0A1W2PRV1 198 aa12.99□□□□□ -0.33
SHISA2-201ENST00000319420 C10orf55Q5SWW7 151 aa12.99□□□□□ -0.33
SHISA2-201ENST00000319420 PINX1Q96BK5 328 aaKnown RBP12.99□□□□□ -0.33
SHISA2-201ENST00000319420 SEBOXQ9HB31 216 aaPredicted RBP12.99□□□□□ -0.33
SHISA2-201ENST00000319420 ENY2Q9NPA8 101 aa12.99□□□□□ -0.33
SHISA2-201ENST00000319420 SLC39A9Q9NUM3 307 aa12.99□□□□□ -0.33
SHISA2-201ENST00000319420 OR51B2Q9Y5P1 312 aa12.99□□□□□ -0.33
SHISA2-201ENST00000319420 A0A1W2PPR1 153 aa12.99□□□□□ -0.33
SHISA2-201ENST00000319420 SAA1P0DJI8 122 aaPredicted RBP12.99□□□□□ -0.33
SHISA2-201ENST00000319420 ZNF429Q86V71 674 aa12.99□□□□□ -0.33
SHISA2-201ENST00000319420 CORO2AQ92828 525 aa12.99□□□□□ -0.33
SHISA2-201ENST00000319420 LHX4Q969G2 390 aa12.99□□□□□ -0.33
SHISA2-201ENST00000319420 RAB39BQ96DA2 213 aa12.99□□□□□ -0.33
SHISA2-201ENST00000319420 TRAV1-1A0A0B4J248 108 aa12.98□□□□□ -0.33
SHISA2-201ENST00000319420 MAP1LC3B2A6NCE7 125 aa12.98□□□□□ -0.33
SHISA2-201ENST00000319420 HBE1P02100 147 aa12.98□□□□□ -0.33
SHISA2-201ENST00000319420 RAB11AP62491 216 aa12.98□□□□□ -0.33
SHISA2-201ENST00000319420 SERF2P84101 59 aa12.98□□□□□ -0.33
SHISA2-201ENST00000319420 TMEM41BQ5BJD5 291 aa12.98□□□□□ -0.33
SHISA2-201ENST00000319420 GATAD1Q8WUU5 269 aa12.98□□□□□ -0.33
SHISA2-201ENST00000319420 MBD3L1Q8WWY6 194 aa12.98□□□□□ -0.33
SHISA2-201ENST00000319420 RITA1Q96K30 269 aa12.98□□□□□ -0.33
SHISA2-201ENST00000319420 NPCDR1Q9BY65 106 aa12.98□□□□□ -0.33
SHISA2-201ENST00000319420 MAP1LC3BQ9GZQ8 125 aa12.98□□□□□ -0.33
SHISA2-201ENST00000319420 ONECUT1Q9UBC0 465 aa12.98□□□□□ -0.33
SHISA2-201ENST00000319420 C15orf61A6NNL5 157 aa12.98□□□□□ -0.33
SHISA2-201ENST00000319420 J3QR06 171 aa12.98□□□□□ -0.33
SHISA2-201ENST00000319420 CD1BP29016 333 aa12.98□□□□□ -0.33
SHISA2-201ENST00000319420 MLANAQ16655 118 aa12.98□□□□□ -0.33
SHISA2-201ENST00000319420 C15orf54Q8N8G6 183 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms