RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 SPNP16150 400 aa12.33□□□□□ -0.44
HDDC2-201ENST00000318787 F2RP25116 425 aa12.33□□□□□ -0.44
HDDC2-201ENST00000318787 LPAR6P43657 344 aa12.33□□□□□ -0.44
HDDC2-201ENST00000318787 C15orf32Q32M92 178 aa12.33□□□□□ -0.44
HDDC2-201ENST00000318787 ZNF343Q6P1L6 599 aa12.33□□□□□ -0.44
HDDC2-201ENST00000318787 LAX1Q8IWV1 398 aa12.33□□□□□ -0.44
HDDC2-201ENST00000318787 OR52I2Q8NH67 350 aa12.33□□□□□ -0.44
HDDC2-201ENST00000318787 OR4A5Q8NH83 315 aa12.33□□□□□ -0.44
HDDC2-201ENST00000318787 FCAMRQ8WWV6 532 aa12.33□□□□□ -0.44
HDDC2-201ENST00000318787 DGCR14Q96DF8 476 aaKnown RBP12.33□□□□□ -0.44
HDDC2-201ENST00000318787 HINT2Q9BX68 163 aa12.33□□□□□ -0.44
HDDC2-201ENST00000318787 PLEKHA2Q9HB19 425 aa12.33□□□□□ -0.44
HDDC2-201ENST00000318787 SLC2A9Q9NRM0 540 aa12.33□□□□□ -0.44
HDDC2-201ENST00000318787 FBXL7Q9UJT9 491 aa12.33□□□□□ -0.44
HDDC2-201ENST00000318787 A0A1B0GW64 132 aa12.32□□□□□ -0.44
HDDC2-201ENST00000318787 UPK2O00526 184 aa12.32□□□□□ -0.44
HDDC2-201ENST00000318787 DHFRP00374 187 aa12.32□□□□□ -0.44
HDDC2-201ENST00000318787 KRASP01116 189 aa12.32□□□□□ -0.44
HDDC2-201ENST00000318787 ZNF735P0CB33 412 aa12.32□□□□□ -0.44
HDDC2-201ENST00000318787 G6PCP35575 357 aa12.32□□□□□ -0.44
HDDC2-201ENST00000318787 TATDN3Q17R31 274 aa12.32□□□□□ -0.44
HDDC2-201ENST00000318787 RNASE10Q5GAN6 216 aaKnown RBP12.32□□□□□ -0.44
HDDC2-201ENST00000318787 LPCAT3Q6P1A2 487 aa12.32□□□□□ -0.44
HDDC2-201ENST00000318787 NECAP1Q8NC96 275 aa12.32□□□□□ -0.44
HDDC2-201ENST00000318787 RAB2BQ8WUD1 216 aa12.32□□□□□ -0.44
HDDC2-201ENST00000318787 COMMD9Q9P000 198 aa12.32□□□□□ -0.44
HDDC2-201ENST00000318787 SORL1Q92673 2214 aa12.32□□□□□ -0.44
HDDC2-201ENST00000318787 MARCH11A6NNE9 402 aa12.31□□□□□ -0.44
HDDC2-201ENST00000318787 NPIPB5A8MRT5 1133 aa12.31□□□□□ -0.44
HDDC2-201ENST00000318787 PPP5D1E7EU14 171 aa12.31□□□□□ -0.44
HDDC2-201ENST00000318787 CTDSP2O14595 271 aa12.31□□□□□ -0.44
HDDC2-201ENST00000318787 BRI3O95415 125 aa12.31□□□□□ -0.44
HDDC2-201ENST00000318787 PSMB6P28072 239 aa12.31□□□□□ -0.44
HDDC2-201ENST00000318787 PPP5CP53041 499 aa12.31□□□□□ -0.44
HDDC2-201ENST00000318787 C11orf87Q6NUJ2 197 aa12.31□□□□□ -0.44
HDDC2-201ENST00000318787 TBC1D26Q86UD7 250 aa12.31□□□□□ -0.44
HDDC2-201ENST00000318787 OR9G4Q8NGQ1 327 aa12.31□□□□□ -0.44
HDDC2-201ENST00000318787 B9D2Q9BPU9 175 aa12.31□□□□□ -0.44
HDDC2-201ENST00000318787 C6orf62Q9GZU0 229 aaPredicted RBP12.31□□□□□ -0.44
HDDC2-201ENST00000318787 MIXL1Q9H2W2 232 aa12.31□□□□□ -0.44
HDDC2-201ENST00000318787 NSG2Q9Y328 171 aa12.31□□□□□ -0.44
HDDC2-201ENST00000318787 TRBV9A0A0B4J1U6 114 aa12.3□□□□□ -0.44
HDDC2-201ENST00000318787 CD3DP04234 171 aa12.3□□□□□ -0.44
HDDC2-201ENST00000318787 GP9P14770 177 aa12.3□□□□□ -0.44
HDDC2-201ENST00000318787 OR2B8PP59922 312 aa12.3□□□□□ -0.44
HDDC2-201ENST00000318787 SCGB2B2Q4G0G5 96 aa12.3□□□□□ -0.44
HDDC2-201ENST00000318787 SLC38A6Q8IZM9 456 aa12.3□□□□□ -0.44
HDDC2-201ENST00000318787 ABHD1Q96SE0 405 aa12.3□□□□□ -0.44
HDDC2-201ENST00000318787 CCDC160A6NGH7 325 aa12.3□□□□□ -0.44
HDDC2-201ENST00000318787 CGB1A6NKQ9 187 aa12.3□□□□□ -0.44
HDDC2-201ENST00000318787 BMPR1BO00238 502 aa12.3□□□□□ -0.44
HDDC2-201ENST00000318787 SNAPC5O75971 98 aa12.3□□□□□ -0.44
HDDC2-201ENST00000318787 NDUFB8O95169 186 aa12.3□□□□□ -0.44
HDDC2-201ENST00000318787 HLA-AP01891 365 aaKnown RBP12.3□□□□□ -0.44
HDDC2-201ENST00000318787 PI3P19957 117 aa12.3□□□□□ -0.44
HDDC2-201ENST00000318787 MECP2P51608 486 aaKnown RBP12.3□□□□□ -0.44
HDDC2-201ENST00000318787 KLF5Q13887 457 aaPredicted RBP12.3□□□□□ -0.44
HDDC2-201ENST00000318787 IL18Q14116 193 aa12.3□□□□□ -0.44
HDDC2-201ENST00000318787 POU2AF1Q16633 256 aa12.3□□□□□ -0.44
HDDC2-201ENST00000318787 VAX1Q5SQQ9 334 aa12.3□□□□□ -0.44
HDDC2-201ENST00000318787 OR10W1Q8NGF6 305 aa12.3□□□□□ -0.44
HDDC2-201ENST00000318787 C15orf40Q8WUR7 153 aa12.3□□□□□ -0.44
HDDC2-201ENST00000318787 DIRAS2Q96HU8 199 aa12.3□□□□□ -0.44
HDDC2-201ENST00000318787 ASCL2Q99929 193 aa12.3□□□□□ -0.44
HDDC2-201ENST00000318787 CTRB1P17538 263 aa12.29□□□□□ -0.44
HDDC2-201ENST00000318787 RPL5P46777 297 aaKnown RBP12.29□□□□□ -0.44
HDDC2-201ENST00000318787 TMBIM6P55061 237 aa12.29□□□□□ -0.44
HDDC2-201ENST00000318787 ZNF585BQ52M93 769 aa12.29□□□□□ -0.44
HDDC2-201ENST00000318787 CTRB2Q6GPI1 263 aa12.29□□□□□ -0.44
HDDC2-201ENST00000318787 CLEC19AQ6UXS0 136 aa12.29□□□□□ -0.44
HDDC2-201ENST00000318787 EEF1AKMT3Q96AZ1 226 aa12.29□□□□□ -0.44
HDDC2-201ENST00000318787 QTRT1Q9BXR0 403 aaKnown RBP12.29□□□□□ -0.44
HDDC2-201ENST00000318787 ZC4H2Q9NQZ6 224 aa12.29□□□□□ -0.44
HDDC2-201ENST00000318787 MTFP1Q9UDX5 166 aa12.29□□□□□ -0.44
HDDC2-201ENST00000318787 LSM4Q9Y4Z0 139 aaKnown RBP12.29□□□□□ -0.44
HDDC2-201ENST00000318787 SMAD5-AS1Q9Y6J3 95 aa12.29□□□□□ -0.44
HDDC2-201ENST00000318787 DNAH9Q9NYC9 4486 aa12.28□□□□□ -0.44
HDDC2-201ENST00000318787 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.28□□□□□ -0.44
HDDC2-201ENST00000318787 RAB3DO95716 219 aa12.28□□□□□ -0.44
HDDC2-201ENST00000318787 TRAPPC2P0DI81 140 aa12.28□□□□□ -0.44
HDDC2-201ENST00000318787 TRAPPC2BP0DI82 140 aa12.28□□□□□ -0.44
HDDC2-201ENST00000318787 HIST1H1BP16401 226 aaKnown RBP12.28□□□□□ -0.44
HDDC2-201ENST00000318787 ARL3P36405 182 aa12.28□□□□□ -0.44
HDDC2-201ENST00000318787 PRR20EP86478 221 aa12.28□□□□□ -0.44
HDDC2-201ENST00000318787 PRR20CP86479 221 aa12.28□□□□□ -0.44
HDDC2-201ENST00000318787 PRR20DP86480 221 aa12.28□□□□□ -0.44
HDDC2-201ENST00000318787 PRR20BP86481 221 aa12.28□□□□□ -0.44
HDDC2-201ENST00000318787 PRR20AP86496 221 aa12.28□□□□□ -0.44
HDDC2-201ENST00000318787 FAAP20Q6NZ36 180 aa12.28□□□□□ -0.44
HDDC2-201ENST00000318787 OR4D10Q8NGI6 311 aa12.28□□□□□ -0.44
HDDC2-201ENST00000318787 DYNC2LI1Q8TCX1 351 aa12.28□□□□□ -0.44
HDDC2-201ENST00000318787 FANCD2OSQ96PS1 177 aa12.28□□□□□ -0.44
HDDC2-201ENST00000318787 CCDC59Q9P031 241 aaKnown RBP12.28□□□□□ -0.44
HDDC2-201ENST00000318787 PEMTQ9UBM1 199 aa12.28□□□□□ -0.44
HDDC2-201ENST00000318787 OR51B2Q9Y5P1 312 aa12.28□□□□□ -0.44
HDDC2-201ENST00000318787 TEX50A0A1B0GTY4 177 aa12.27□□□□□ -0.45
HDDC2-201ENST00000318787 IGLC7A0M8Q6 106 aa12.27□□□□□ -0.45
HDDC2-201ENST00000318787 H3BMQ9 156 aa12.27□□□□□ -0.45
HDDC2-201ENST00000318787 GABARAPH6UMI1 98 aa12.27□□□□□ -0.45
HDDC2-201ENST00000318787 SERPINE2P07093 398 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms