RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 COL6A6A6NMZ7 2263 aa7.12□□□□□ -1.27
PDLIM5-201ENST00000317968 OR2T8A6NH00 312 aa7.12□□□□□ -1.27
PDLIM5-201ENST00000317968 E7EQL1 145 aa7.12□□□□□ -1.27
PDLIM5-201ENST00000317968 AGPAT2O15120 278 aa7.12□□□□□ -1.27
PDLIM5-201ENST00000317968 LRP11Q86VZ4 500 aa7.12□□□□□ -1.27
PDLIM5-201ENST00000317968 SLC24A4Q8NFF2 622 aa7.12□□□□□ -1.27
PDLIM5-201ENST00000317968 DOCK7Q96N67 2140 aa7.12□□□□□ -1.27
PDLIM5-201ENST00000317968 DIDO1Q9BTC0 2240 aaKnown RBP7.11□□□□□ -1.27
PDLIM5-201ENST00000317968 OR4C46A6NHA9 309 aa7.11□□□□□ -1.27
PDLIM5-201ENST00000317968 RAB5BP61020 215 aa7.11□□□□□ -1.27
PDLIM5-201ENST00000317968 TEX261Q6UWH6 196 aa7.11□□□□□ -1.27
PDLIM5-201ENST00000317968 Q6ZR03 302 aa7.11□□□□□ -1.27
PDLIM5-201ENST00000317968 AKR1D1P51857 326 aa7.11□□□□□ -1.27
PDLIM5-201ENST00000317968 LYZL2Q7Z4W2 148 aa7.11□□□□□ -1.27
PDLIM5-201ENST00000317968 DMRTC2Q8IXT2 367 aaPredicted RBP7.11□□□□□ -1.27
PDLIM5-201ENST00000317968 SELENOHQ8IZQ5 122 aaKnown RBP7.11□□□□□ -1.27
PDLIM5-201ENST00000317968 BLNKQ8WV28 456 aa7.11□□□□□ -1.27
PDLIM5-201ENST00000317968 REG4Q9BYZ8 158 aa7.11□□□□□ -1.27
PDLIM5-201ENST00000317968 PUS1Q9Y606 427 aaKnown RBP eCLIP7.11□□□□□ -1.27
PDLIM5-201ENST00000317968 SNAPINO95295 136 aa7.11□□□□□ -1.27
PDLIM5-201ENST00000317968 UBE2L3P68036 154 aaKnown RBP7.11□□□□□ -1.27
PDLIM5-201ENST00000317968 TEPPQ6URK8 271 aa7.11□□□□□ -1.27
PDLIM5-201ENST00000317968 TPRX1Q8N7U7 411 aa7.11□□□□□ -1.27
PDLIM5-201ENST00000317968 SMLR1H3BR10 107 aa7.11□□□□□ -1.27
PDLIM5-201ENST00000317968 MPDU1O75352 247 aa7.11□□□□□ -1.27
PDLIM5-201ENST00000317968 ZNRF1Q8ND25 227 aa7.11□□□□□ -1.27
PDLIM5-201ENST00000317968 RXFP4Q8TDU9 374 aa7.11□□□□□ -1.27
PDLIM5-201ENST00000317968 G6PCP35575 357 aa7.11□□□□□ -1.27
PDLIM5-201ENST00000317968 ZNF818PQ6ZRF7 136 aa7.11□□□□□ -1.27
PDLIM5-201ENST00000317968 RNF5Q99942 180 aa7.11□□□□□ -1.27
PDLIM5-201ENST00000317968 NBR2O15453 112 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 SEC11BP0C7V7 166 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 HTN1P15515 57 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 SOHLH1Q5JUK2 328 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 DOK5Q9P104 306 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 ANKHD1Q8IWZ3 2542 aaKnown RBP7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 DEDDO75618 318 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 VMO1Q7Z5L0 202 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 UBE2DNLQ8IWF7 75 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 FAM216BQ8N7L0 139 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 RHOVQ96L33 236 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 RAB19A4D1S5 217 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 UBE2L6O14933 153 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 PPP1R2P9O14990 202 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 RD3LP0DJH9 198 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 RPL7P18124 248 aaKnown RBP7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 CEBPDP49716 269 aaPredicted RBP7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 DLX6P56179 175 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 DPPA3Q6W0C5 159 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 MRGPRFQ96AM1 343 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 SMIM8Q96KF7 97 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 SAMD10Q9BYL1 202 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 RPS10P5Q9NQ39 176 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 NPFFO15130 113 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 ZNF737O75373 536 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 UQCC3Q6UW78 93 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 COMMD7Q86VX2 200 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 GOLT1BQ9Y3E0 138 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 ADIRFQ15847 76 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 MORN2Q502X0 79 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 FGFRL1Q8N441 504 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 NHLRC2Q8NBF2 726 aa7.1□□□□□ -1.27
PDLIM5-201ENST00000317968 NCOR2Q9Y618 2525 aa7.09□□□□□ -1.27
PDLIM5-201ENST00000317968 PRB1P04280 392 aa7.09□□□□□ -1.27
PDLIM5-201ENST00000317968 CDC34P49427 236 aaPredicted RBP7.09□□□□□ -1.27
PDLIM5-201ENST00000317968 CR1LQ2VPA4 569 aa7.09□□□□□ -1.27
PDLIM5-201ENST00000317968 WDR25Q64LD2 544 aaPredicted RBP7.09□□□□□ -1.27
PDLIM5-201ENST00000317968 ALKAL2Q6UX46 152 aa7.09□□□□□ -1.27
PDLIM5-201ENST00000317968 MARC2Q969Z3 335 aa7.09□□□□□ -1.27
PDLIM5-201ENST00000317968 IL36RNQ9UBH0 155 aa7.09□□□□□ -1.27
PDLIM5-201ENST00000317968 TRAV39A0A0B4J263 110 aa7.09□□□□□ -1.27
PDLIM5-201ENST00000317968 A0A0B4J293 547 aa7.09□□□□□ -1.27
PDLIM5-201ENST00000317968 PSPNO60542 156 aa7.09□□□□□ -1.27
PDLIM5-201ENST00000317968 C8orf31Q8N9H6 132 aa7.09□□□□□ -1.27
PDLIM5-201ENST00000317968 SSTR5P35346 364 aa7.09□□□□□ -1.27
PDLIM5-201ENST00000317968 HSPE1P61604 102 aaKnown RBP7.09□□□□□ -1.27
PDLIM5-201ENST00000317968 LCN15Q6UWW0 184 aa7.09□□□□□ -1.27
PDLIM5-201ENST00000317968 CD177Q8N6Q3 437 aa7.09□□□□□ -1.27
PDLIM5-201ENST00000317968 GPR82Q96P67 336 aa7.09□□□□□ -1.27
PDLIM5-201ENST00000317968 TOLLIPQ9H0E2 274 aa7.09□□□□□ -1.27
PDLIM5-201ENST00000317968 ZNF430Q9H8G1 570 aaPredicted RBP7.09□□□□□ -1.27
PDLIM5-201ENST00000317968 IGKV1D-17A0A075B6S4 117 aa7.09□□□□□ -1.27
PDLIM5-201ENST00000317968 A0A1B0GWJ7 208 aa7.09□□□□□ -1.27
PDLIM5-201ENST00000317968 LGALSLQ3ZCW2 172 aaPredicted RBP7.09□□□□□ -1.27
PDLIM5-201ENST00000317968 GAFA1Q96PS6 74 aa7.09□□□□□ -1.27
PDLIM5-201ENST00000317968 FBXL7Q9UJT9 491 aa7.09□□□□□ -1.27
PDLIM5-201ENST00000317968 PCNX1Q96RV3 2341 aa7.09□□□□□ -1.28
PDLIM5-201ENST00000317968 F8VVB4 439 aa7.09□□□□□ -1.28
PDLIM5-201ENST00000317968 F8VWA3 439 aa7.09□□□□□ -1.28
PDLIM5-201ENST00000317968 PITX3O75364 302 aa7.09□□□□□ -1.28
PDLIM5-201ENST00000317968 C1QL1O75973 258 aa7.09□□□□□ -1.28
PDLIM5-201ENST00000317968 NDUFA6P56556 154 aa7.09□□□□□ -1.28
PDLIM5-201ENST00000317968 STHQ8IWL8 128 aa7.09□□□□□ -1.28
PDLIM5-201ENST00000317968 GGACTQ9BVM4 153 aa7.09□□□□□ -1.28
PDLIM5-201ENST00000317968 NKX6-2Q9C056 277 aaPredicted RBP7.09□□□□□ -1.28
PDLIM5-201ENST00000317968 SPTBN1Q01082 2364 aaKnown RBP7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 EML6Q6ZMW3 1958 aa7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 IGHV3OR16-12A0A075B7B8 117 aa7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 SERF2P84101 59 aa7.08□□□□□ -1.28
PDLIM5-201ENST00000317968 SPINK9Q5DT21 86 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms