RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 OR4A47Q6IF82 309 aa7.51□□□□□ -1.21
CTC1-201ENST00000315684 SELENOHQ8IZQ5 122 aaKnown RBP7.51□□□□□ -1.21
CTC1-201ENST00000315684 NEURL2Q9BR09 285 aa7.51□□□□□ -1.21
CTC1-201ENST00000315684 ZNF430Q9H8G1 570 aaPredicted RBP7.51□□□□□ -1.21
CTC1-201ENST00000315684 NPAP1Q9NZP6 1156 aa7.51□□□□□ -1.21
CTC1-201ENST00000315684 TRGV2A0A075B6R0 118 aa7.51□□□□□ -1.21
CTC1-201ENST00000315684 NUP210Q8TEM1 1887 aaPredicted RBP7.51□□□□□ -1.21
CTC1-201ENST00000315684 IGLV3-32A0A0A0MS00 114 aa7.51□□□□□ -1.21
CTC1-201ENST00000315684 MRPL54Q6P161 138 aaKnown RBP7.51□□□□□ -1.21
CTC1-201ENST00000315684 RGP1Q92546 391 aaPredicted RBP7.51□□□□□ -1.21
CTC1-201ENST00000315684 PQLC2LA1A4F0 135 aa7.51□□□□□ -1.21
CTC1-201ENST00000315684 C5orf63A6NC05 138 aa7.51□□□□□ -1.21
CTC1-201ENST00000315684 CBY3A6NI87 242 aa7.51□□□□□ -1.21
CTC1-201ENST00000315684 CORTO00230 105 aa7.51□□□□□ -1.21
CTC1-201ENST00000315684 KBTBD11O94819 623 aa7.51□□□□□ -1.21
CTC1-201ENST00000315684 C1QBP02746 253 aa7.51□□□□□ -1.21
CTC1-201ENST00000315684 PRSS54Q6PEW0 395 aa7.51□□□□□ -1.21
CTC1-201ENST00000315684 OR2D3Q8NGH3 330 aa7.51□□□□□ -1.21
CTC1-201ENST00000315684 PHLDA3Q9Y5J5 127 aa7.51□□□□□ -1.21
CTC1-201ENST00000315684 SULT1A1P50225 295 aa7.5□□□□□ -1.21
CTC1-201ENST00000315684 ERVK11-1P61568 191 aa7.5□□□□□ -1.21
CTC1-201ENST00000315684 ZNF56Q15929 161 aa7.5□□□□□ -1.21
CTC1-201ENST00000315684 GUK1Q16774 197 aa7.5□□□□□ -1.21
CTC1-201ENST00000315684 C5orf24Q7Z6I8 188 aa7.5□□□□□ -1.21
CTC1-201ENST00000315684 KIAA2026Q5HYC2 2103 aa7.5□□□□□ -1.21
CTC1-201ENST00000315684 SAA4P35542 130 aa7.5□□□□□ -1.21
CTC1-201ENST00000315684 P2RY1P47900 373 aa7.5□□□□□ -1.21
CTC1-201ENST00000315684 KRTDAPP60985 99 aa7.5□□□□□ -1.21
CTC1-201ENST00000315684 IGFBPL1Q8WX77 278 aa7.5□□□□□ -1.21
CTC1-201ENST00000315684 FAM131CQ96AQ9 280 aa7.5□□□□□ -1.21
CTC1-201ENST00000315684 C21orf62Q9NYP8 219 aa7.5□□□□□ -1.21
CTC1-201ENST00000315684 ZNRD1Q9P1U0 126 aa7.5□□□□□ -1.21
CTC1-201ENST00000315684 GAS1P54826 345 aa7.5□□□□□ -1.21
CTC1-201ENST00000315684 CLDND2Q8NHS1 167 aa7.5□□□□□ -1.21
CTC1-201ENST00000315684 HELTA6NFD8 242 aa7.5□□□□□ -1.21
CTC1-201ENST00000315684 SNURFLB1AK76 121 aa7.5□□□□□ -1.21
CTC1-201ENST00000315684 TMEM127O75204 238 aa7.5□□□□□ -1.21
CTC1-201ENST00000315684 ZP1P60852 638 aa7.5□□□□□ -1.21
CTC1-201ENST00000315684 MBNL2Q5VZF2 373 aaKnown RBP7.5□□□□□ -1.21
CTC1-201ENST00000315684 GATA2P23769 480 aaPredicted RBP7.5□□□□□ -1.21
CTC1-201ENST00000315684 MEF2CQ06413 473 aaPredicted RBP7.5□□□□□ -1.21
CTC1-201ENST00000315684 FDX2Q6P4F2 183 aa7.5□□□□□ -1.21
CTC1-201ENST00000315684 BPIFA4PQ86YQ2 179 aa7.5□□□□□ -1.21
CTC1-201ENST00000315684 SYT8Q8NBV8 401 aa7.5□□□□□ -1.21
CTC1-201ENST00000315684 MRPL13Q9BYD1 178 aaKnown RBP7.5□□□□□ -1.21
CTC1-201ENST00000315684 SIAH2O43255 324 aa7.5□□□□□ -1.21
CTC1-201ENST00000315684 TRAPPC1Q9Y5R8 145 aa7.5□□□□□ -1.21
CTC1-201ENST00000315684 ARPC4-TTLL3A0A0A6YYG9 625 aa7.49□□□□□ -1.21
CTC1-201ENST00000315684 MFNGO00587 321 aa7.49□□□□□ -1.21
CTC1-201ENST00000315684 TCF21O43680 179 aa7.49□□□□□ -1.21
CTC1-201ENST00000315684 SAA1P0DJI8 122 aaPredicted RBP7.49□□□□□ -1.21
CTC1-201ENST00000315684 LEMD1Q68G75 181 aa7.49□□□□□ -1.21
CTC1-201ENST00000315684 ZNF705AQ6ZN79 300 aaPredicted RBP7.49□□□□□ -1.21
CTC1-201ENST00000315684 SIGLECL1Q8N7X8 197 aa7.49□□□□□ -1.21
CTC1-201ENST00000315684 NEU1Q99519 415 aa7.49□□□□□ -1.21
CTC1-201ENST00000315684 TTC28Q96AY4 2481 aa7.49□□□□□ -1.21
CTC1-201ENST00000315684 PTPRQQ9UMZ3 2332 aa7.49□□□□□ -1.21
CTC1-201ENST00000315684 J3QW42 95 aa7.49□□□□□ -1.21
CTC1-201ENST00000315684 SFTA3P0C7M3 94 aa7.49□□□□□ -1.21
CTC1-201ENST00000315684 RELBQ01201 579 aa7.49□□□□□ -1.21
CTC1-201ENST00000315684 LINC00305Q7Z4B0 112 aa7.49□□□□□ -1.21
CTC1-201ENST00000315684 PTX4Q96A99 478 aa7.49□□□□□ -1.21
CTC1-201ENST00000315684 TMEM189A5PLL7 270 aa7.49□□□□□ -1.21
CTC1-201ENST00000315684 RPL7P18124 248 aaKnown RBP7.49□□□□□ -1.21
CTC1-201ENST00000315684 LINC00114Q6XXX2 140 aa7.49□□□□□ -1.21
CTC1-201ENST00000315684 DCAF16Q9NXF7 216 aa7.49□□□□□ -1.21
CTC1-201ENST00000315684 TRAV30A0A087WSZ9 112 aa7.49□□□□□ -1.21
CTC1-201ENST00000315684 CXorf1O96002 111 aa7.49□□□□□ -1.21
CTC1-201ENST00000315684 ZNF415Q09FC8 603 aa7.49□□□□□ -1.21
CTC1-201ENST00000315684 SMUG1Q53HV7 270 aa7.49□□□□□ -1.21
CTC1-201ENST00000315684 IGFL3Q6UXB1 125 aa7.49□□□□□ -1.21
CTC1-201ENST00000315684 TP53RKQ96S44 253 aa7.49□□□□□ -1.21
CTC1-201ENST00000315684 TRBV5-7A0A0A0MS05 114 aa7.49□□□□□ -1.21
CTC1-201ENST00000315684 LHFPL5Q8TAF8 219 aa7.49□□□□□ -1.21
CTC1-201ENST00000315684 MOB4Q9Y3A3 225 aa7.49□□□□□ -1.21
CTC1-201ENST00000315684 TRAV41A0A0B4J266 112 aa7.48□□□□□ -1.21
CTC1-201ENST00000315684 IGSF23A1L1A6 192 aa7.48□□□□□ -1.21
CTC1-201ENST00000315684 MFSD2BA6NFX1 497 aa7.48□□□□□ -1.21
CTC1-201ENST00000315684 IGF2P01344 180 aa7.48□□□□□ -1.21
CTC1-201ENST00000315684 CXCL3P19876 107 aa7.48□□□□□ -1.21
CTC1-201ENST00000315684 TNFRSF9Q07011 255 aa7.48□□□□□ -1.21
CTC1-201ENST00000315684 TMEM241Q24JQ0 296 aa7.48□□□□□ -1.21
CTC1-201ENST00000315684 FAM159AQ6UWV7 190 aa7.48□□□□□ -1.21
CTC1-201ENST00000315684 TMEM116Q8NCL8 245 aa7.48□□□□□ -1.21
CTC1-201ENST00000315684 NOL4LQ96MY1 436 aaPredicted RBP7.48□□□□□ -1.21
CTC1-201ENST00000315684 TMEM222Q9H0R3 208 aa7.48□□□□□ -1.21
CTC1-201ENST00000315684 COL4A4P53420 1690 aaPredicted RBP7.48□□□□□ -1.21
CTC1-201ENST00000315684 OR5AL1P0C617 328 aa7.48□□□□□ -1.21
CTC1-201ENST00000315684 NDPQ00604 133 aa7.48□□□□□ -1.21
CTC1-201ENST00000315684 SURF2Q15527 256 aaPredicted RBP7.48□□□□□ -1.21
CTC1-201ENST00000315684 DEFB113Q30KQ7 82 aa7.48□□□□□ -1.21
CTC1-201ENST00000315684 KLF17Q5JT82 389 aaPredicted RBP7.48□□□□□ -1.21
CTC1-201ENST00000315684 PIP4P2Q8N4L2 257 aa7.48□□□□□ -1.21
CTC1-201ENST00000315684 TMEM37Q8WXS4 190 aa7.48□□□□□ -1.21
CTC1-201ENST00000315684 PRO3102Q9H379 93 aa7.48□□□□□ -1.21
CTC1-201ENST00000315684 MYLKQ15746 1914 aa7.48□□□□□ -1.21
CTC1-201ENST00000315684 IRF3Q14653 427 aa7.48□□□□□ -1.21
CTC1-201ENST00000315684 CD177Q8N6Q3 437 aa7.48□□□□□ -1.21
CTC1-201ENST00000315684 OR5AC2Q9NZP5 309 aa7.48□□□□□ -1.21
CTC1-201ENST00000315684 NPIPB13A6NJU9 1138 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms