RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 DIDO1Q9BTC0 2240 aaKnown RBP12.28□□□□□ -0.44
CHFR-202ENST00000315585 NKX6-3A6NJ46 265 aa12.28□□□□□ -0.44
CHFR-202ENST00000315585 TMPRSS2O15393 492 aa12.28□□□□□ -0.44
CHFR-202ENST00000315585 IGHV1-46P01743 117 aa12.28□□□□□ -0.44
CHFR-202ENST00000315585 GYPAP02724 150 aa12.28□□□□□ -0.44
CHFR-202ENST00000315585 NPY1RP25929 384 aa12.28□□□□□ -0.44
CHFR-202ENST00000315585 LYG1Q8N1E2 194 aa12.28□□□□□ -0.44
CHFR-202ENST00000315585 IMMP2LQ96T52 175 aa12.28□□□□□ -0.44
CHFR-202ENST00000315585 MIOXQ9UGB7 285 aa12.28□□□□□ -0.44
CHFR-202ENST00000315585 PXMP4Q9Y6I8 212 aa12.28□□□□□ -0.44
CHFR-202ENST00000315585 SAA2-SAA4A0A096LPE2 208 aa12.27□□□□□ -0.44
CHFR-202ENST00000315585 RRHO14718 337 aa12.27□□□□□ -0.44
CHFR-202ENST00000315585 SAA2P0DJI9 122 aaPredicted RBP12.27□□□□□ -0.44
CHFR-202ENST00000315585 RPS16P62249 146 aaKnown RBP12.27□□□□□ -0.44
CHFR-202ENST00000315585 CST9LP1Q5W188 147 aa12.27□□□□□ -0.44
CHFR-202ENST00000315585 ZNF788Q6ZQV5 615 aa12.27□□□□□ -0.44
CHFR-202ENST00000315585 Q8N7P7 452 aa12.27□□□□□ -0.44
CHFR-202ENST00000315585 SSX3Q99909 188 aa12.27□□□□□ -0.44
CHFR-202ENST00000315585 CELSR3Q9NYQ7 3312 aa12.27□□□□□ -0.45
CHFR-202ENST00000315585 PRSS46E5RG02 174 aa12.27□□□□□ -0.45
CHFR-202ENST00000315585 STAG3L2P0CL84 134 aa12.27□□□□□ -0.45
CHFR-202ENST00000315585 STAG3L3P0CL85 134 aa12.27□□□□□ -0.45
CHFR-202ENST00000315585 CA7P43166 264 aa12.27□□□□□ -0.45
CHFR-202ENST00000315585 RHOBP62745 196 aa12.27□□□□□ -0.45
CHFR-202ENST00000315585 LCN2P80188 198 aa12.27□□□□□ -0.45
CHFR-202ENST00000315585 TEX36Q5VZQ5 186 aa12.27□□□□□ -0.45
CHFR-202ENST00000315585 OR4A47Q6IF82 309 aa12.27□□□□□ -0.45
CHFR-202ENST00000315585 FRZBQ92765 325 aa12.27□□□□□ -0.45
CHFR-202ENST00000315585 GGTLC1Q9BX51 225 aa12.27□□□□□ -0.45
CHFR-202ENST00000315585 GAL3ST2Q9H3Q3 398 aa12.27□□□□□ -0.45
CHFR-202ENST00000315585 DOCK11Q5JSL3 2073 aa12.26□□□□□ -0.45
CHFR-202ENST00000315585 MEF2CQ06413 473 aaPredicted RBP12.26□□□□□ -0.45
CHFR-202ENST00000315585 VKORC1L1Q8N0U8 176 aa12.26□□□□□ -0.45
CHFR-202ENST00000315585 ABHD5Q8WTS1 349 aa12.26□□□□□ -0.45
CHFR-202ENST00000315585 MS4A5Q9H3V2 200 aa12.26□□□□□ -0.45
CHFR-202ENST00000315585 LSM4Q9Y4Z0 139 aaKnown RBP12.26□□□□□ -0.45
CHFR-202ENST00000315585 TRAV38-1A0A0B4J264 116 aa12.26□□□□□ -0.45
CHFR-202ENST00000315585 RPL29P47914 159 aaKnown RBP12.26□□□□□ -0.45
CHFR-202ENST00000315585 ABHD12Q8N2K0 398 aa12.26□□□□□ -0.45
CHFR-202ENST00000315585 OR2T10Q8NGZ9 312 aa12.26□□□□□ -0.45
CHFR-202ENST00000315585 ACY3Q96HD9 319 aa12.26□□□□□ -0.45
CHFR-202ENST00000315585 GAFA1Q96PS6 74 aa12.26□□□□□ -0.45
CHFR-202ENST00000315585 DMRT1Q9Y5R6 373 aa12.26□□□□□ -0.45
CHFR-202ENST00000315585 LINC00312Q9Y6C7 94 aa12.26□□□□□ -0.45
CHFR-202ENST00000315585 LOC400499M0QZD8 3231 aa12.26□□□□□ -0.45
CHFR-202ENST00000315585 SPNS3Q6ZMD2 512 aa12.25□□□□□ -0.45
CHFR-202ENST00000315585 C22orf34Q6ZV56 151 aa12.25□□□□□ -0.45
CHFR-202ENST00000315585 HIST3H2BBQ8N257 126 aa12.25□□□□□ -0.45
CHFR-202ENST00000315585 MGST2Q99735 147 aa12.25□□□□□ -0.45
CHFR-202ENST00000315585 PLEKHA3Q9HB20 300 aa12.25□□□□□ -0.45
CHFR-202ENST00000315585 RPUSD1Q9UJJ7 312 aaKnown RBP12.25□□□□□ -0.45
CHFR-202ENST00000315585 SPTBN2O15020 2390 aa12.25□□□□□ -0.45
CHFR-202ENST00000315585 DPRXA6NFQ7 191 aa12.25□□□□□ -0.45
CHFR-202ENST00000315585 SLC31A2O15432 143 aa12.25□□□□□ -0.45
CHFR-202ENST00000315585 SLC25A48Q6ZT89 311 aaKnown RBP12.25□□□□□ -0.45
CHFR-202ENST00000315585 ZNF439Q8NDP4 499 aa12.25□□□□□ -0.45
CHFR-202ENST00000315585 PFDN5Q99471 154 aa12.25□□□□□ -0.45
CHFR-202ENST00000315585 C19orf24Q9BVV8 132 aa12.25□□□□□ -0.45
CHFR-202ENST00000315585 OR51B2Q9Y5P1 312 aa12.25□□□□□ -0.45
CHFR-202ENST00000315585 ARL2-SNX15V9GYD0 113 aa12.25□□□□□ -0.45
CHFR-202ENST00000315585 ZFHX4Q86UP3 3567 aa12.24□□□□□ -0.45
CHFR-202ENST00000315585 ZGRF1Q86YA3 2104 aa12.24□□□□□ -0.45
CHFR-202ENST00000315585 GGCTO75223 188 aaKnown RBP12.24□□□□□ -0.45
CHFR-202ENST00000315585 TYMSP04818 313 aa12.24□□□□□ -0.45
CHFR-202ENST00000315585 THBDP07204 575 aa12.24□□□□□ -0.45
CHFR-202ENST00000315585 BSPH1Q075Z2 132 aa12.24□□□□□ -0.45
CHFR-202ENST00000315585 ZNF383Q8NA42 475 aa12.24□□□□□ -0.45
CHFR-202ENST00000315585 OR5B3Q8NH48 314 aa12.24□□□□□ -0.45
CHFR-202ENST00000315585 GATAD1Q8WUU5 269 aa12.24□□□□□ -0.45
CHFR-202ENST00000315585 ZCCHC14Q8WYQ9 949 aaKnown RBP12.24□□□□□ -0.45
CHFR-202ENST00000315585 PTPRQQ9UMZ3 2332 aa12.24□□□□□ -0.45
CHFR-202ENST00000315585 J3QR06 171 aa12.23□□□□□ -0.45
CHFR-202ENST00000315585 IGHV3-7P01780 117 aa12.23□□□□□ -0.45
CHFR-202ENST00000315585 SPRNQ5BIV9 151 aa12.23□□□□□ -0.45
CHFR-202ENST00000315585 UHRF2Q96PU4 802 aa12.23□□□□□ -0.45
CHFR-202ENST00000315585 CCL13Q99616 98 aa12.23□□□□□ -0.45
CHFR-202ENST00000315585 PATZ1Q9HBE1 687 aaKnown RBP12.23□□□□□ -0.45
CHFR-202ENST00000315585 SLC35D1Q9NTN3 355 aa12.23□□□□□ -0.45
CHFR-202ENST00000315585 FRYQ5TBA9 3013 aa12.23□□□□□ -0.45
CHFR-202ENST00000315585 ANKRD11Q6UB99 2663 aaPredicted RBP12.23□□□□□ -0.45
CHFR-202ENST00000315585 TRAV3A0A0B4J244 114 aa12.23□□□□□ -0.45
CHFR-202ENST00000315585 C1QTNF9P0C862 333 aa12.23□□□□□ -0.45
CHFR-202ENST00000315585 CHRNB4P30926 498 aa12.23□□□□□ -0.45
CHFR-202ENST00000315585 PRCDQ00LT1 54 aa12.23□□□□□ -0.45
CHFR-202ENST00000315585 MIC13Q5XKP0 118 aa12.23□□□□□ -0.45
CHFR-202ENST00000315585 UNQ6494/PRO21346Q6UXR6 183 aa12.23□□□□□ -0.45
CHFR-202ENST00000315585 LINC01551Q86U37 167 aa12.23□□□□□ -0.45
CHFR-202ENST00000315585 TMEM183AQ8IXX5 376 aa12.23□□□□□ -0.45
CHFR-202ENST00000315585 DEFB108BQ8NET1 73 aa12.23□□□□□ -0.45
CHFR-202ENST00000315585 OR10D4PQ8NGN7 298 aa12.23□□□□□ -0.45
CHFR-202ENST00000315585 OR4X1Q8NH49 305 aa12.23□□□□□ -0.45
CHFR-202ENST00000315585 OSR1Q8TAX0 266 aaPredicted RBP12.23□□□□□ -0.45
CHFR-202ENST00000315585 HCFC1P51610 2035 aa12.23□□□□□ -0.45
CHFR-202ENST00000315585 UPK2O00526 184 aa12.22□□□□□ -0.45
CHFR-202ENST00000315585 CCL21O00585 134 aa12.22□□□□□ -0.45
CHFR-202ENST00000315585 PHOX2AO14813 284 aa12.22□□□□□ -0.45
CHFR-202ENST00000315585 APOA2P02652 100 aa12.22□□□□□ -0.45
CHFR-202ENST00000315585 IL6RP08887 468 aaPredicted RBP12.22□□□□□ -0.45
CHFR-202ENST00000315585 ARL14EPLP0DKL9 152 aa12.22□□□□□ -0.45
CHFR-202ENST00000315585 FBXL19-AS1Q494R0 122 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms