RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 TRAT1Q6PIZ9 186 aa10.22□□□□□ -0.77
RNF4-201ENST00000314289 SCGB1C1Q8TD33 95 aa10.22□□□□□ -0.77
RNF4-201ENST00000314289 YPEL2Q96QA6 119 aa10.22□□□□□ -0.77
RNF4-201ENST00000314289 HSPB7Q9UBY9 170 aa10.22□□□□□ -0.77
RNF4-201ENST00000314289 F2RL2O00254 374 aa10.22□□□□□ -0.77
RNF4-201ENST00000314289 OPN1MWP04001 364 aa10.22□□□□□ -0.77
RNF4-201ENST00000314289 OPN1MW2P0DN77 364 aa10.22□□□□□ -0.77
RNF4-201ENST00000314289 OPN1MW3P0DN78 364 aa10.22□□□□□ -0.77
RNF4-201ENST00000314289 CGB3P0DN86 165 aa10.22□□□□□ -0.77
RNF4-201ENST00000314289 CGB7P0DN87 165 aa10.22□□□□□ -0.77
RNF4-201ENST00000314289 TAS2R30P59541 319 aa10.22□□□□□ -0.77
RNF4-201ENST00000314289 ZNF66Q6ZN08 573 aa10.22□□□□□ -0.77
RNF4-201ENST00000314289 VKORC1Q9BQB6 163 aa10.22□□□□□ -0.77
RNF4-201ENST00000314289 SLC25A10Q9UBX3 287 aaPredicted RBP10.22□□□□□ -0.77
RNF4-201ENST00000314289 ARHGAP32A7KAX9 2087 aa10.22□□□□□ -0.77
RNF4-201ENST00000314289 TAS2R60P59551 318 aa10.22□□□□□ -0.77
RNF4-201ENST00000314289 SSX7Q7RTT5 188 aa10.22□□□□□ -0.77
RNF4-201ENST00000314289 RNASE6Q93091 150 aaKnown RBP10.22□□□□□ -0.77
RNF4-201ENST00000314289 S1PR3Q99500 378 aa10.22□□□□□ -0.77
RNF4-201ENST00000314289 RPRMQ9NS64 109 aa10.22□□□□□ -0.77
RNF4-201ENST00000314289 DFFBO76075 338 aa10.21□□□□□ -0.77
RNF4-201ENST00000314289 REG1BP48304 166 aa10.21□□□□□ -0.77
RNF4-201ENST00000314289 PAX5Q02548 391 aa10.21□□□□□ -0.77
RNF4-201ENST00000314289 ADIRFQ15847 76 aa10.21□□□□□ -0.77
RNF4-201ENST00000314289 BCL2P10415 239 aa10.21□□□□□ -0.78
RNF4-201ENST00000314289 RPL31P62899 125 aaKnown RBP10.21□□□□□ -0.78
RNF4-201ENST00000314289 HBG1P69891 147 aa10.21□□□□□ -0.78
RNF4-201ENST00000314289 HBG2P69892 147 aa10.21□□□□□ -0.78
RNF4-201ENST00000314289 LY6HO94772 140 aa10.2□□□□□ -0.78
RNF4-201ENST00000314289 IFNA10P01566 189 aa10.2□□□□□ -0.78
RNF4-201ENST00000314289 CR1LQ2VPA4 569 aa10.2□□□□□ -0.78
RNF4-201ENST00000314289 B4DEV8 164 aa10.2□□□□□ -0.78
RNF4-201ENST00000314289 MRPS11P82912 194 aaKnown RBP10.2□□□□□ -0.78
RNF4-201ENST00000314289 TGIF2LXQ8IUE1 241 aa10.2□□□□□ -0.78
RNF4-201ENST00000314289 OR4X1Q8NH49 305 aa10.2□□□□□ -0.78
RNF4-201ENST00000314289 HINT2Q9BX68 163 aa10.2□□□□□ -0.78
RNF4-201ENST00000314289 TMEM106BQ9NUM4 274 aa10.2□□□□□ -0.78
RNF4-201ENST00000314289 PPIAL4EA0A075B759 164 aa10.2□□□□□ -0.78
RNF4-201ENST00000314289 PIGBOS1A0A0B4J2F0 54 aa10.2□□□□□ -0.78
RNF4-201ENST00000314289 PPIAL4DF5H284 164 aa10.2□□□□□ -0.78
RNF4-201ENST00000314289 TMEM178BH3BS89 294 aa10.2□□□□□ -0.78
RNF4-201ENST00000314289 RAB29O14966 203 aa10.2□□□□□ -0.78
RNF4-201ENST00000314289 SIAH2O43255 324 aa10.2□□□□□ -0.78
RNF4-201ENST00000314289 PPIAL4FP0DN26 164 aa10.2□□□□□ -0.78
RNF4-201ENST00000314289 TFF3Q07654 80 aa10.2□□□□□ -0.78
RNF4-201ENST00000314289 ZNF124Q15973 351 aa10.2□□□□□ -0.78
RNF4-201ENST00000314289 TMEM14EPQ6UXP3 125 aa10.2□□□□□ -0.78
RNF4-201ENST00000314289 CISD1Q9NZ45 108 aaKnown RBP10.2□□□□□ -0.78
RNF4-201ENST00000314289 PITPNC1Q9UKF7 332 aa10.2□□□□□ -0.78
RNF4-201ENST00000314289 LAMP3Q9UQV4 416 aa10.2□□□□□ -0.78
RNF4-201ENST00000314289 PPIAL4AQ9Y536 164 aa10.2□□□□□ -0.78
RNF4-201ENST00000314289 WNK2Q9Y3S1 2297 aa10.19□□□□□ -0.78
RNF4-201ENST00000314289 AMBPP02760 352 aa10.19□□□□□ -0.78
RNF4-201ENST00000314289 IGKV1-16P04430 117 aa10.19□□□□□ -0.78
RNF4-201ENST00000314289 CASP6P55212 293 aa10.19□□□□□ -0.78
RNF4-201ENST00000314289 OR4A16Q8NH70 328 aa10.19□□□□□ -0.78
RNF4-201ENST00000314289 TMEM140Q9NV12 185 aa10.19□□□□□ -0.78
RNF4-201ENST00000314289 HPRT1P00492 218 aa10.19□□□□□ -0.78
RNF4-201ENST00000314289 GZMBP10144 247 aa10.19□□□□□ -0.78
RNF4-201ENST00000314289 COL8A2P25067 703 aa10.19□□□□□ -0.78
RNF4-201ENST00000314289 ZNF726P1Q15940 193 aa10.19□□□□□ -0.78
RNF4-201ENST00000314289 TEX36Q5VZQ5 186 aa10.19□□□□□ -0.78
RNF4-201ENST00000314289 SP5Q6BEB4 398 aaPredicted RBP10.19□□□□□ -0.78
RNF4-201ENST00000314289 ABHD12Q8N2K0 398 aa10.19□□□□□ -0.78
RNF4-201ENST00000314289 OR10A7Q8NGE5 316 aa10.19□□□□□ -0.78
RNF4-201ENST00000314289 WDR61Q9GZS3 305 aaKnown RBP10.19□□□□□ -0.78
RNF4-201ENST00000314289 SDF2L1Q9HCN8 221 aa10.19□□□□□ -0.78
RNF4-201ENST00000314289 IDI2-AS1Q9NZ38 188 aa10.19□□□□□ -0.78
RNF4-201ENST00000314289 CTSZQ9UBR2 303 aa10.19□□□□□ -0.78
RNF4-201ENST00000314289 ABCA1O95477 2261 aa10.19□□□□□ -0.78
RNF4-201ENST00000314289 TRAV38-1A0A0B4J264 116 aa10.18□□□□□ -0.78
RNF4-201ENST00000314289 NKX6-3A6NJ46 265 aa10.18□□□□□ -0.78
RNF4-201ENST00000314289 CD3EP07766 207 aa10.18□□□□□ -0.78
RNF4-201ENST00000314289 FGF7P21781 194 aa10.18□□□□□ -0.78
RNF4-201ENST00000314289 RND2P52198 227 aa10.18□□□□□ -0.78
RNF4-201ENST00000314289 PNRC1Q12796 327 aaPredicted RBP10.18□□□□□ -0.78
RNF4-201ENST00000314289 DIAPH2-AS1Q14236 149 aa10.18□□□□□ -0.78
RNF4-201ENST00000314289 LRRC75BQ2VPJ9 315 aa10.18□□□□□ -0.78
RNF4-201ENST00000314289 TMEM200BQ69YZ2 307 aa10.18□□□□□ -0.78
RNF4-201ENST00000314289 TMEM183AQ8IXX5 376 aa10.18□□□□□ -0.78
RNF4-201ENST00000314289 ZNF664Q8N3J9 261 aa10.18□□□□□ -0.78
RNF4-201ENST00000314289 CA5BP1Q8WTZ4 195 aa10.18□□□□□ -0.78
RNF4-201ENST00000314289 XKRY2A2RUG3 117 aa10.18□□□□□ -0.78
RNF4-201ENST00000314289 FAM90A26D6RGX4 464 aa10.18□□□□□ -0.78
RNF4-201ENST00000314289 IGKV1D-33P01593 117 aa10.18□□□□□ -0.78
RNF4-201ENST00000314289 IGKV1-33P01594 117 aa10.18□□□□□ -0.78
RNF4-201ENST00000314289 CA7P43166 264 aa10.18□□□□□ -0.78
RNF4-201ENST00000314289 C16orf82Q7Z2V1 217 aa10.18□□□□□ -0.78
RNF4-201ENST00000314289 TAF15Q92804 592 aaKnown RBP eCLIP10.18□□□□□ -0.786e-6■■■■□ 22
RNF4-201ENST00000314289 RPUSD4Q96CM3 377 aaKnown RBP10.18□□□□□ -0.78
RNF4-201ENST00000314289 SMIM7Q9BQ49 75 aa10.18□□□□□ -0.78
RNF4-201ENST00000314289 NGBQ9NPG2 151 aa10.18□□□□□ -0.78
RNF4-201ENST00000314289 HEYLQ9NQ87 328 aaPredicted RBP10.18□□□□□ -0.78
RNF4-201ENST00000314289 ACACBO00763 2458 aa10.18□□□□□ -0.78
RNF4-201ENST00000314289 CFAP46Q8IYW2 2715 aa10.18□□□□□ -0.78
RNF4-201ENST00000314289 RRHO14718 337 aa10.18□□□□□ -0.78
RNF4-201ENST00000314289 ERVK-16P61578 105 aa10.18□□□□□ -0.78
RNF4-201ENST00000314289 KLRB1Q12918 225 aa10.18□□□□□ -0.78
RNF4-201ENST00000314289 JOSD1Q15040 202 aaPredicted RBP10.18□□□□□ -0.78
RNF4-201ENST00000314289 OR10P1Q8NGE3 313 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms