RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 GPR141Q7Z602 305 aa11.12□□□□□ -0.63
PPP1CA-201ENST00000312989 CADM3Q8N126 398 aa11.12□□□□□ -0.63
PPP1CA-201ENST00000312989 NECAP1Q8NC96 275 aa11.12□□□□□ -0.63
PPP1CA-201ENST00000312989 OR9G4Q8NGQ1 327 aa11.12□□□□□ -0.63
PPP1CA-201ENST00000312989 OR6F1Q8NGZ6 308 aa11.12□□□□□ -0.63
PPP1CA-201ENST00000312989 OR52I2Q8NH67 350 aa11.12□□□□□ -0.63
PPP1CA-201ENST00000312989 FYTTD1Q96QD9 318 aaKnown RBP11.12□□□□□ -0.63
PPP1CA-201ENST00000312989 IGLV11-55A0A075B6I3 123 aa11.11□□□□□ -0.63
PPP1CA-201ENST00000312989 MARCH11A6NNE9 402 aa11.11□□□□□ -0.63
PPP1CA-201ENST00000312989 M0QYG6 137 aa11.11□□□□□ -0.63
PPP1CA-201ENST00000312989 GPR31O00270 319 aa11.11□□□□□ -0.63
PPP1CA-201ENST00000312989 CTDSP2O14595 271 aa11.11□□□□□ -0.63
PPP1CA-201ENST00000312989 MPPED1O15442 326 aa11.11□□□□□ -0.63
PPP1CA-201ENST00000312989 TPPPO94811 219 aa11.11□□□□□ -0.63
PPP1CA-201ENST00000312989 CSN3P07498 182 aa11.11□□□□□ -0.63
PPP1CA-201ENST00000312989 GP9P14770 177 aa11.11□□□□□ -0.63
PPP1CA-201ENST00000312989 UCP3P55916 312 aa11.11□□□□□ -0.63
PPP1CA-201ENST00000312989 C15orf32Q32M92 178 aa11.11□□□□□ -0.63
PPP1CA-201ENST00000312989 LAX1Q8IWV1 398 aa11.11□□□□□ -0.63
PPP1CA-201ENST00000312989 DYNC2LI1Q8TCX1 351 aa11.11□□□□□ -0.63
PPP1CA-201ENST00000312989 CD300LFQ8TDQ1 290 aa11.11□□□□□ -0.63
PPP1CA-201ENST00000312989 AP3S1Q92572 193 aa11.11□□□□□ -0.63
PPP1CA-201ENST00000312989 MRGPRFQ96AM1 343 aa11.11□□□□□ -0.63
PPP1CA-201ENST00000312989 DGCR14Q96DF8 476 aaKnown RBP11.11□□□□□ -0.63
PPP1CA-201ENST00000312989 EXTL2Q9UBQ6 330 aa11.11□□□□□ -0.63
PPP1CA-201ENST00000312989 MTFP1Q9UDX5 166 aa11.11□□□□□ -0.63
PPP1CA-201ENST00000312989 RYR3Q15413 4870 aa11.1□□□□□ -0.63
PPP1CA-201ENST00000312989 SMIM31A0A1B0GVY4 71 aa11.1□□□□□ -0.63
PPP1CA-201ENST00000312989 DBX1A6NMT0 343 aa11.1□□□□□ -0.63
PPP1CA-201ENST00000312989 REG1AP05451 166 aa11.1□□□□□ -0.63
PPP1CA-201ENST00000312989 RPA2P15927 270 aa11.1□□□□□ -0.63
PPP1CA-201ENST00000312989 EDN2P20800 178 aa11.1□□□□□ -0.63
PPP1CA-201ENST00000312989 ATP5G2Q06055 141 aa11.1□□□□□ -0.63
PPP1CA-201ENST00000312989 MZT2AQ6P582 158 aa11.1□□□□□ -0.63
PPP1CA-201ENST00000312989 SLC25A42Q86VD7 318 aa11.1□□□□□ -0.63
PPP1CA-201ENST00000312989 Q8N1Y9 231 aa11.1□□□□□ -0.63
PPP1CA-201ENST00000312989 OR4D10Q8NGI6 311 aa11.1□□□□□ -0.63
PPP1CA-201ENST00000312989 BORCS5Q969J3 196 aa11.1□□□□□ -0.63
PPP1CA-201ENST00000312989 SIGLEC8Q9NYZ4 499 aa11.1□□□□□ -0.63
PPP1CA-201ENST00000312989 FAM25AB3EWG3 89 aa11.09□□□□□ -0.63
PPP1CA-201ENST00000312989 FAM25CB3EWG5 89 aa11.09□□□□□ -0.63
PPP1CA-201ENST00000312989 FAM25GB3EWG6 89 aa11.09□□□□□ -0.63
PPP1CA-201ENST00000312989 CD74P04233 296 aa11.09□□□□□ -0.63
PPP1CA-201ENST00000312989 LPAR6P43657 344 aa11.09□□□□□ -0.63
PPP1CA-201ENST00000312989 WT1-ASQ06250 92 aa11.09□□□□□ -0.63
PPP1CA-201ENST00000312989 CD69Q07108 199 aa11.09□□□□□ -0.63
PPP1CA-201ENST00000312989 DCTN2Q13561 401 aaKnown RBP11.09□□□□□ -0.63
PPP1CA-201ENST00000312989 PHLDA2Q53GA4 152 aa11.09□□□□□ -0.63
PPP1CA-201ENST00000312989 RNASE12Q5GAN4 147 aaKnown RBP11.09□□□□□ -0.63
PPP1CA-201ENST00000312989 CLVS1Q8IUQ0 354 aaPredicted RBP11.09□□□□□ -0.63
PPP1CA-201ENST00000312989 OR10W1Q8NGF6 305 aa11.09□□□□□ -0.63
PPP1CA-201ENST00000312989 OR6Q1Q8NGQ2 317 aa11.09□□□□□ -0.63
PPP1CA-201ENST00000312989 OR4C12Q96R67 309 aa11.09□□□□□ -0.63
PPP1CA-201ENST00000312989 HRASLSQ9HDD0 168 aa11.09□□□□□ -0.63
PPP1CA-201ENST00000312989 FAM212BQ9NTI7 297 aaPredicted RBP11.09□□□□□ -0.63
PPP1CA-201ENST00000312989 FBXL7Q9UJT9 491 aa11.09□□□□□ -0.63
PPP1CA-201ENST00000312989 S4R3C0 116 aa11.09□□□□□ -0.63
PPP1CA-201ENST00000312989 STAB2Q8WWQ8 2551 aa11.09□□□□□ -0.63
PPP1CA-201ENST00000312989 TEX50A0A1B0GTY4 177 aa11.08□□□□□ -0.64
PPP1CA-201ENST00000312989 MFSD2BA6NFX1 497 aa11.08□□□□□ -0.64
PPP1CA-201ENST00000312989 PPP5D1E7EU14 171 aa11.08□□□□□ -0.64
PPP1CA-201ENST00000312989 CD3DP04234 171 aa11.08□□□□□ -0.64
PPP1CA-201ENST00000312989 PTBP1P26599 531 aaKnown RBP eCLIP11.08□□□□□ -0.64
PPP1CA-201ENST00000312989 G6PCP35575 357 aa11.08□□□□□ -0.64
PPP1CA-201ENST00000312989 MFAP2P55001 183 aa11.08□□□□□ -0.64
PPP1CA-201ENST00000312989 TMBIM6P55061 237 aa11.08□□□□□ -0.64
PPP1CA-201ENST00000312989 TBC1D26Q86UD7 250 aa11.08□□□□□ -0.64
PPP1CA-201ENST00000312989 RAB2BQ8WUD1 216 aa11.08□□□□□ -0.64
PPP1CA-201ENST00000312989 ZNF414Q96IQ9 312 aa11.08□□□□□ -0.64
PPP1CA-201ENST00000312989 SRSF8Q9BRL6 282 aaKnown RBP11.08□□□□□ -0.64
PPP1CA-201ENST00000312989 AIFM2Q9BRQ8 373 aa11.08□□□□□ -0.64
PPP1CA-201ENST00000312989 SLIRPQ9GZT3 109 aaKnown RBP11.08□□□□□ -0.64
PPP1CA-201ENST00000312989 NDUFA4L2Q9NRX3 87 aa11.08□□□□□ -0.64
PPP1CA-201ENST00000312989 TENM3Q9P273 2699 aa11.08□□□□□ -0.64
PPP1CA-201ENST00000312989 KRASP01116 189 aa11.07□□□□□ -0.64
PPP1CA-201ENST00000312989 IGHV3-23P01764 117 aa11.07□□□□□ -0.64
PPP1CA-201ENST00000312989 HLA-AP01891 365 aaKnown RBP11.07□□□□□ -0.64
PPP1CA-201ENST00000312989 P0C879 139 aa11.07□□□□□ -0.64
PPP1CA-201ENST00000312989 RPEL1Q2QD12 228 aa11.07□□□□□ -0.64
PPP1CA-201ENST00000312989 CMTM1Q8IZ96 169 aa11.07□□□□□ -0.64
PPP1CA-201ENST00000312989 DMBX1Q8NFW5 382 aa11.07□□□□□ -0.64
PPP1CA-201ENST00000312989 SEC22AQ96IW7 307 aa11.07□□□□□ -0.64
PPP1CA-201ENST00000312989 BCL7BQ9BQE9 202 aa11.07□□□□□ -0.64
PPP1CA-201ENST00000312989 QTRT1Q9BXR0 403 aaKnown RBP11.07□□□□□ -0.64
PPP1CA-201ENST00000312989 CCDC59Q9P031 241 aaKnown RBP11.07□□□□□ -0.64
PPP1CA-201ENST00000312989 NSG2Q9Y328 171 aa11.07□□□□□ -0.64
PPP1CA-201ENST00000312989 SMAD5-AS1Q9Y6J3 95 aa11.07□□□□□ -0.64
PPP1CA-201ENST00000312989 IZUMO1RA6ND01 250 aa11.06□□□□□ -0.64
PPP1CA-201ENST00000312989 F8W735 103 aaPredicted RBP11.06□□□□□ -0.64
PPP1CA-201ENST00000312989 LY86O95711 162 aa11.06□□□□□ -0.64
PPP1CA-201ENST00000312989 RND3P61587 244 aa11.06□□□□□ -0.64
PPP1CA-201ENST00000312989 TSPAN5P62079 268 aa11.06□□□□□ -0.64
PPP1CA-201ENST00000312989 SLC38A6Q8IZM9 456 aa11.06□□□□□ -0.64
PPP1CA-201ENST00000312989 ARRDC1Q8N5I2 433 aa11.06□□□□□ -0.64
PPP1CA-201ENST00000312989 SOSTQ9BQB4 213 aa11.06□□□□□ -0.64
PPP1CA-201ENST00000312989 ELOVL1Q9BW60 279 aa11.06□□□□□ -0.64
PPP1CA-201ENST00000312989 TMEM14BQ9NUH8 114 aa11.06□□□□□ -0.64
PPP1CA-201ENST00000312989 H3BMQ9 156 aa11.05□□□□□ -0.64
PPP1CA-201ENST00000312989 GABARAPH6UMI1 98 aa11.05□□□□□ -0.64
PPP1CA-201ENST00000312989 PI3P19957 117 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms