RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 HIST1H2BHQ93079 126 aa5.06□□□□□ -1.6
SEC22A-201ENST00000309934 TMEM56Q96MV1 263 aa5.06□□□□□ -1.6
SEC22A-201ENST00000309934 HIST1H2BNQ99877 126 aa5.06□□□□□ -1.6
SEC22A-201ENST00000309934 HIST1H2BMQ99879 126 aa5.06□□□□□ -1.6
SEC22A-201ENST00000309934 RSG1Q9BU20 258 aa5.06□□□□□ -1.6
SEC22A-201ENST00000309934 IDI2-AS1Q9NZ38 188 aa5.06□□□□□ -1.6
SEC22A-201ENST00000309934 THYN1Q9P016 225 aa5.06□□□□□ -1.6
SEC22A-201ENST00000309934 ZNF319Q9P2F9 582 aa5.06□□□□□ -1.6
SEC22A-201ENST00000309934 SLC25A10Q9UBX3 287 aaPredicted RBP5.06□□□□□ -1.6
SEC22A-201ENST00000309934 Q9UFV3 132 aa5.06□□□□□ -1.6
SEC22A-201ENST00000309934 PRNDQ9UKY0 176 aa5.06□□□□□ -1.6
SEC22A-201ENST00000309934 CSAG2Q9Y5P2 127 aa5.06□□□□□ -1.6
SEC22A-201ENST00000309934 COX11Q9Y6N1 276 aa5.06□□□□□ -1.6
SEC22A-201ENST00000309934 A6NDN8 102 aa5.06□□□□□ -1.6
SEC22A-201ENST00000309934 LANCL1O43813 399 aa5.06□□□□□ -1.6
SEC22A-201ENST00000309934 TNFRSF6BO95407 300 aa5.06□□□□□ -1.6
SEC22A-201ENST00000309934 CD8AP01732 235 aa5.06□□□□□ -1.6
SEC22A-201ENST00000309934 NBEAP1P0C6P0 100 aa5.06□□□□□ -1.6
SEC22A-201ENST00000309934 RPL12P30050 165 aaKnown RBP5.06□□□□□ -1.6
SEC22A-201ENST00000309934 ERHP84090 104 aaKnown RBP5.06□□□□□ -1.6
SEC22A-201ENST00000309934 LY6G6FQ5SQ64 297 aa5.06□□□□□ -1.6
SEC22A-201ENST00000309934 ZNF497Q6ZNH5 498 aa5.06□□□□□ -1.6
SEC22A-201ENST00000309934 LRTM2Q8N967 370 aa5.06□□□□□ -1.6
SEC22A-201ENST00000309934 ZNF714Q96N38 554 aa5.06□□□□□ -1.6
SEC22A-201ENST00000309934 TMEM222Q9H0R3 208 aa5.06□□□□□ -1.6
SEC22A-201ENST00000309934 TUBA4BQ9H853 241 aa5.06□□□□□ -1.6
SEC22A-201ENST00000309934 KIAA1456Q9P272 454 aa5.06□□□□□ -1.6
SEC22A-201ENST00000309934 FUT9Q9Y231 359 aa5.06□□□□□ -1.6
SEC22A-201ENST00000309934 SSUH2Q9Y2M2 353 aa5.06□□□□□ -1.6
SEC22A-201ENST00000309934 LINC00312Q9Y6C7 94 aa5.06□□□□□ -1.6
SEC22A-201ENST00000309934 TMEM56-RWDD3S4R434 201 aa5.06□□□□□ -1.6
SEC22A-201ENST00000309934 IGHV1-69-2A0A0G2JMI3 117 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 K7EP13 123 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 BMPR1BO00238 502 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 SYNGR1O43759 233 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 FABP2P12104 132 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 LMO1P25800 156 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 STUMQ69YW2 141 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 ZNF324BQ6AW86 544 aaPredicted RBP5.05□□□□□ -1.6
SEC22A-201ENST00000309934 H1FOOQ8IZA3 346 aaPredicted RBP5.05□□□□□ -1.6
SEC22A-201ENST00000309934 GVQW1Q8N7I0 195 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 HSPB9Q9BQS6 159 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 TRAPPC1Q9Y5R8 145 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 SELENOKQ9Y6D0 94 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 CNTRLQ7Z7A1 2325 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 IGLV3-9A0A075B6K5 115 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 CA1P00915 261 aaPredicted RBP5.05□□□□□ -1.6
SEC22A-201ENST00000309934 GAPDHP04406 335 aaKnown RBP5.05□□□□□ -1.6
SEC22A-201ENST00000309934 COX6B1P14854 86 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 HES1Q14469 280 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 PLAC9Q5JTB6 97 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 TBC1D26Q86UD7 250 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 GBGT1Q8N5D6 347 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 SSC4DQ8WTU2 575 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 SRSF8Q9BRL6 282 aaKnown RBP5.05□□□□□ -1.6
SEC22A-201ENST00000309934 ACTR3CQ9C0K3 210 aaPredicted RBP5.05□□□□□ -1.6
SEC22A-201ENST00000309934 TMEM106BQ9NUM4 274 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 C1RLQ9NZP8 487 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 NAT8Q9UHE5 227 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 VSIG4Q9Y279 399 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 MKI67P46013 3256 aaKnown RBP5.05□□□□□ -1.6
SEC22A-201ENST00000309934 TRBV6-7A0A0A0MS04 114 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 ATXN7O15265 892 aaPredicted RBP5.05□□□□□ -1.6
SEC22A-201ENST00000309934 YPEL1O60688 119 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 IGHV2-5P01817 119 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 PDLIM4P50479 330 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 TMEM50BP56557 158 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 BSPH1Q075Z2 132 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 FAM27E3Q08E93 113 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 OR4A5Q8NH83 315 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 FGFBP3Q8TAT2 258 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 YPEL2Q96QA6 119 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 H3BQ15 152 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 K7N7A8 449 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 NAPSAO96009 420 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 GPR6P46095 362 aaPredicted RBP5.05□□□□□ -1.6
SEC22A-201ENST00000309934 TMEM33P57088 247 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 FOXF2Q12947 444 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 RPL7L1Q6DKI1 246 aaKnown RBP5.05□□□□□ -1.6
SEC22A-201ENST00000309934 ZNF474Q6S9Z5 364 aaPredicted RBP5.05□□□□□ -1.6
SEC22A-201ENST00000309934 WDR82Q6UXN9 313 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 LHFPL1Q86WI0 220 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 OR4D5Q8NGN0 318 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 ASCL2Q99929 193 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 FAM215AQ9Y5M1 114 aa5.05□□□□□ -1.6
SEC22A-201ENST00000309934 DEDDO75618 318 aa5.04□□□□□ -1.6
SEC22A-201ENST00000309934 FSTL3O95633 263 aa5.04□□□□□ -1.6
SEC22A-201ENST00000309934 HBZP02008 142 aa5.04□□□□□ -1.6
SEC22A-201ENST00000309934 WNT2P09544 360 aa5.04□□□□□ -1.6
SEC22A-201ENST00000309934 SPINK2P20155 84 aa5.04□□□□□ -1.6
SEC22A-201ENST00000309934 SRSF4Q08170 494 aaKnown RBP5.04□□□□□ -1.6
SEC22A-201ENST00000309934 BSXQ3C1V8 233 aa5.04□□□□□ -1.6
SEC22A-201ENST00000309934 OR10P1Q8NGE3 313 aa5.04□□□□□ -1.6
SEC22A-201ENST00000309934 MRPL30Q8TCC3 161 aaKnown RBP5.04□□□□□ -1.6
SEC22A-201ENST00000309934 ACY3Q96HD9 319 aa5.04□□□□□ -1.6
SEC22A-201ENST00000309934 ABHD14AQ9BUJ0 271 aa5.04□□□□□ -1.6
SEC22A-201ENST00000309934 CALYQ9NYX4 217 aa5.04□□□□□ -1.6
SEC22A-201ENST00000309934 WSB1Q9Y6I7 421 aa5.04□□□□□ -1.6
SEC22A-201ENST00000309934 SMG1Q96Q15 3661 aaKnown RBP5.04□□□□□ -1.6
SEC22A-201ENST00000309934 C7orf71A4D174 169 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms