RNA–Protein interactions for RNA: ENST00000309534.10

CGGBP1-201, Transcript of CGG triplet repeat binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGGBP1, Length 4,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGGBP1-201ENST00000309534 ARV1Q9H2C2 271 aa12.78□□□□□ -0.36
CGGBP1-201ENST00000309534 RBFOX3A6NFN3 312 aa12.77□□□□□ -0.36
CGGBP1-201ENST00000309534 SFTA3P0C7M3 94 aa12.77□□□□□ -0.36
CGGBP1-201ENST00000309534 IGHV3-72A0A0B4J1Y9 119 aa12.77□□□□□ -0.37
CGGBP1-201ENST00000309534 FAM106CPP0CH98 169 aa12.77□□□□□ -0.37
CGGBP1-201ENST00000309534 M6PRP20645 277 aa12.77□□□□□ -0.37
CGGBP1-201ENST00000309534 FAM53AQ6NSI3 398 aaPredicted RBP12.77□□□□□ -0.37
CGGBP1-201ENST00000309534 MANBALQ9NQG1 85 aa12.77□□□□□ -0.37
CGGBP1-201ENST00000309534 TOX4O94842 621 aa12.76□□□□□ -0.37
CGGBP1-201ENST00000309534 MINOS1Q5TGZ0 78 aa12.76□□□□□ -0.37
CGGBP1-201ENST00000309534 KIR3DL3Q8N743 410 aa12.76□□□□□ -0.37
CGGBP1-201ENST00000309534 TMEM167AQ8TBQ9 72 aa12.76□□□□□ -0.37
CGGBP1-201ENST00000309534 ACY3Q96HD9 319 aa12.76□□□□□ -0.37
CGGBP1-201ENST00000309534 AUP1Q9Y679 476 aa12.76□□□□□ -0.37
CGGBP1-201ENST00000309534 MINOS1-NBL1R4GNA1 71 aa12.76□□□□□ -0.37
CGGBP1-201ENST00000309534 PRTN3P24158 256 aa12.76□□□□□ -0.37
CGGBP1-201ENST00000309534 RPL19P84098 196 aaKnown RBP12.76□□□□□ -0.37
CGGBP1-201ENST00000309534 OR5AN1Q8NGI8 311 aa12.76□□□□□ -0.37
CGGBP1-201ENST00000309534 LINC00052Q96N35 136 aa12.76□□□□□ -0.37
CGGBP1-201ENST00000309534 THYN1Q9P016 225 aa12.76□□□□□ -0.37
CGGBP1-201ENST00000309534 HILPDAQ9Y5L2 63 aa12.76□□□□□ -0.37
CGGBP1-201ENST00000309534 A8MXK9 166 aa12.76□□□□□ -0.37
CGGBP1-201ENST00000309534 A0A1W2PRD5 423 aa12.76□□□□□ -0.37
CGGBP1-201ENST00000309534 A0A1W2PRF3 423 aa12.76□□□□□ -0.37
CGGBP1-201ENST00000309534 A0A1W2PRM7 423 aa12.76□□□□□ -0.37
CGGBP1-201ENST00000309534 BUB1B-PAK6H3BSN5 160 aa12.76□□□□□ -0.37
CGGBP1-201ENST00000309534 OR1L4Q8NGR5 311 aa12.76□□□□□ -0.37
CGGBP1-201ENST00000309534 RPS10P5Q9NQ39 176 aa12.76□□□□□ -0.37
CGGBP1-201ENST00000309534 BSCL2Q96G97 398 aaPredicted RBP12.75□□□□□ -0.37
CGGBP1-201ENST00000309534 MMP23AO75900 390 aa12.75□□□□□ -0.37
CGGBP1-201ENST00000309534 LCN2P80188 198 aa12.75□□□□□ -0.37
CGGBP1-201ENST00000309534 CST9LP1Q5W188 147 aa12.75□□□□□ -0.37
CGGBP1-201ENST00000309534 RXFP4Q8TDU9 374 aa12.75□□□□□ -0.37
CGGBP1-201ENST00000309534 CA2P00918 260 aa12.75□□□□□ -0.37
CGGBP1-201ENST00000309534 PAX9P55771 341 aa12.75□□□□□ -0.37
CGGBP1-201ENST00000309534 KHDC3LQ587J8 217 aa12.75□□□□□ -0.37
CGGBP1-201ENST00000309534 C1orf122Q6ZSJ8 110 aa12.75□□□□□ -0.37
CGGBP1-201ENST00000309534 MISP3Q96FF7 219 aa12.75□□□□□ -0.37
CGGBP1-201ENST00000309534 SLC45A2Q9UMX9 530 aa12.75□□□□□ -0.37
CGGBP1-201ENST00000309534 B2MP61769 119 aa12.74□□□□□ -0.37
CGGBP1-201ENST00000309534 CACNG8Q8WXS5 425 aa12.74□□□□□ -0.37
CGGBP1-201ENST00000309534 SPOCK3Q9BQ16 436 aa12.74□□□□□ -0.37
CGGBP1-201ENST00000309534 RASL11BQ9BPW5 248 aa12.74□□□□□ -0.37
CGGBP1-201ENST00000309534 RNF24Q9Y225 148 aa12.74□□□□□ -0.37
CGGBP1-201ENST00000309534 TPTE2P1Q5T6R2 138 aa12.74□□□□□ -0.37
CGGBP1-201ENST00000309534 RNASEH2CQ8TDP1 164 aaKnown RBP12.74□□□□□ -0.37
CGGBP1-201ENST00000309534 IGHV1-3A0A0C4DH29 117 aa12.74□□□□□ -0.37
CGGBP1-201ENST00000309534 MOSP00540 346 aa12.74□□□□□ -0.37
CGGBP1-201ENST00000309534 SELENOTP62341 195 aa12.74□□□□□ -0.37
CGGBP1-201ENST00000309534 C8orf46Q8TAG6 207 aa12.74□□□□□ -0.37
CGGBP1-201ENST00000309534 SLC25A22Q9H936 323 aa12.74□□□□□ -0.37
CGGBP1-201ENST00000309534 PUS1Q9Y606 427 aaKnown RBP eCLIP12.74□□□□□ -0.37
CGGBP1-201ENST00000309534 A0A087X0M5 115 aa12.73□□□□□ -0.37
CGGBP1-201ENST00000309534 A0A1B0GX30 115 aa12.73□□□□□ -0.37
CGGBP1-201ENST00000309534 COX7A2P2O60397 106 aa12.73□□□□□ -0.37
CGGBP1-201ENST00000309534 LY6HO94772 140 aa12.73□□□□□ -0.37
CGGBP1-201ENST00000309534 BTN1A1Q13410 526 aa12.73□□□□□ -0.37
CGGBP1-201ENST00000309534 ANKRD11Q6UB99 2663 aaPredicted RBP12.73□□□□□ -0.37
CGGBP1-201ENST00000309534 SPTBN1Q01082 2364 aaKnown RBP12.73□□□□□ -0.37
CGGBP1-201ENST00000309534 C1QL1O75973 258 aa12.73□□□□□ -0.37
CGGBP1-201ENST00000309534 ARSJQ5FYB0 599 aaPredicted RBP12.73□□□□□ -0.37
CGGBP1-201ENST00000309534 PFDN5Q99471 154 aa12.73□□□□□ -0.37
CGGBP1-201ENST00000309534 TMEM14BQ9NUH8 114 aa12.73□□□□□ -0.37
CGGBP1-201ENST00000309534 PXMP4Q9Y6I8 212 aa12.73□□□□□ -0.37
CGGBP1-201ENST00000309534 ABCA4P78363 2273 aa12.73□□□□□ -0.37
CGGBP1-201ENST00000309534 FAM157CP0CG43 387 aa12.73□□□□□ -0.37
CGGBP1-201ENST00000309534 DDB2Q92466 427 aa12.73□□□□□ -0.37
CGGBP1-201ENST00000309534 C19orf24Q9BVV8 132 aa12.73□□□□□ -0.37
CGGBP1-201ENST00000309534 NPCDR1Q9BY65 106 aa12.73□□□□□ -0.37
CGGBP1-201ENST00000309534 SMCO4Q9NRQ5 59 aa12.73□□□□□ -0.37
CGGBP1-201ENST00000309534 VAX2Q9UIW0 290 aa12.73□□□□□ -0.37
CGGBP1-201ENST00000309534 PIEZO2Q9H5I5 2752 aa12.73□□□□□ -0.37
CGGBP1-201ENST00000309534 TMEM11P17152 192 aa12.72□□□□□ -0.37
CGGBP1-201ENST00000309534 GPX4P36969 197 aaPredicted RBP12.72□□□□□ -0.37
CGGBP1-201ENST00000309534 LINC00205P59089 165 aa12.72□□□□□ -0.37
CGGBP1-201ENST00000309534 EIF4EBP1Q13541 118 aaPredicted RBP12.72□□□□□ -0.37
CGGBP1-201ENST00000309534 TEX50A0A1B0GTY4 177 aa12.72□□□□□ -0.37
CGGBP1-201ENST00000309534 TMEM50AO95807 157 aa12.72□□□□□ -0.37
CGGBP1-201ENST00000309534 TFF3Q07654 80 aa12.72□□□□□ -0.37
CGGBP1-201ENST00000309534 PUSL1Q8N0Z8 303 aaKnown RBP12.72□□□□□ -0.37
CGGBP1-201ENST00000309534 TBL2Q9Y4P3 447 aaKnown RBP12.72□□□□□ -0.37
CGGBP1-201ENST00000309534 S100PP25815 95 aa12.72□□□□□ -0.37
CGGBP1-201ENST00000309534 SSX2Q16385 188 aa12.72□□□□□ -0.37
CGGBP1-201ENST00000309534 C11orf71Q6IPW1 123 aa12.72□□□□□ -0.37
CGGBP1-201ENST00000309534 FNDC10F2Z333 226 aa12.72□□□□□ -0.37
CGGBP1-201ENST00000309534 C2orf83Q53S99 150 aa12.72□□□□□ -0.37
CGGBP1-201ENST00000309534 C5orf30Q96GV9 206 aa12.72□□□□□ -0.37
CGGBP1-201ENST00000309534 WDR83OSQ9Y284 106 aa12.72□□□□□ -0.37
CGGBP1-201ENST00000309534 YLPM1P49750 1951 aaKnown RBP12.72□□□□□ -0.37
CGGBP1-201ENST00000309534 SIAH2O43255 324 aa12.71□□□□□ -0.37
CGGBP1-201ENST00000309534 SLC16A13Q7RTY0 426 aa12.71□□□□□ -0.37
CGGBP1-201ENST00000309534 TXNDC17Q9BRA2 123 aa12.71□□□□□ -0.37
CGGBP1-201ENST00000309534 TECRQ9NZ01 308 aaKnown RBP12.71□□□□□ -0.37
CGGBP1-201ENST00000309534 COL6A3P12111 3177 aa12.71□□□□□ -0.37
CGGBP1-201ENST00000309534 TCF23Q7RTU1 214 aa12.71□□□□□ -0.37
CGGBP1-201ENST00000309534 SLC35E3Q7Z769 313 aa12.71□□□□□ -0.37
CGGBP1-201ENST00000309534 OR5B12Q96R08 314 aa12.71□□□□□ -0.37
CGGBP1-201ENST00000309534 F6UZH7 168 aa12.71□□□□□ -0.38
CGGBP1-201ENST00000309534 TUSC1Q2TAM9 212 aa12.71□□□□□ -0.38
CGGBP1-201ENST00000309534 ACSM6Q6P461 480 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms