RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 CFPP27918 469 aa10.64□□□□□ -0.71
RETREG3-201ENST00000309428 ZNRF1Q8ND25 227 aa10.64□□□□□ -0.71
RETREG3-201ENST00000309428 POM121L2Q96KW2 1035 aa10.64□□□□□ -0.71
RETREG3-201ENST00000309428 DIRC2Q96SL1 478 aa10.64□□□□□ -0.71
RETREG3-201ENST00000309428 HELTA6NFD8 242 aa10.63□□□□□ -0.71
RETREG3-201ENST00000309428 C17orf98A8MV24 154 aa10.63□□□□□ -0.71
RETREG3-201ENST00000309428 CA1P00915 261 aaPredicted RBP10.63□□□□□ -0.71
RETREG3-201ENST00000309428 COX5BP10606 129 aa10.63□□□□□ -0.71
RETREG3-201ENST00000309428 USF1P22415 310 aaPredicted RBP10.63□□□□□ -0.71
RETREG3-201ENST00000309428 STUMQ69YW2 141 aa10.63□□□□□ -0.71
RETREG3-201ENST00000309428 LYG1Q8N1E2 194 aa10.63□□□□□ -0.71
RETREG3-201ENST00000309428 TCTEX1D1Q8N7M0 179 aa10.63□□□□□ -0.71
RETREG3-201ENST00000309428 LRRC29Q8WV35 223 aa10.63□□□□□ -0.71
RETREG3-201ENST00000309428 TBL2Q9Y4P3 447 aaKnown RBP10.63□□□□□ -0.71
RETREG3-201ENST00000309428 TANC2Q9HCD6 1990 aa10.63□□□□□ -0.71
RETREG3-201ENST00000309428 FBLL1A6NHQ2 334 aaKnown RBP10.63□□□□□ -0.71
RETREG3-201ENST00000309428 H3BTX0 84 aa10.63□□□□□ -0.71
RETREG3-201ENST00000309428 RRHO14718 337 aa10.63□□□□□ -0.71
RETREG3-201ENST00000309428 CA11O75493 328 aa10.63□□□□□ -0.71
RETREG3-201ENST00000309428 COL8A2P25067 703 aa10.63□□□□□ -0.71
RETREG3-201ENST00000309428 UBE2G1P62253 170 aa10.63□□□□□ -0.71
RETREG3-201ENST00000309428 PSG7Q13046 419 aa10.63□□□□□ -0.71
RETREG3-201ENST00000309428 ZNF726P1Q15940 193 aa10.63□□□□□ -0.71
RETREG3-201ENST00000309428 NMSQ5H8A3 153 aa10.63□□□□□ -0.71
RETREG3-201ENST00000309428 TMEM11P17152 192 aa10.63□□□□□ -0.71
RETREG3-201ENST00000309428 ACP1P24666 158 aa10.63□□□□□ -0.71
RETREG3-201ENST00000309428 BRS3P32247 399 aa10.63□□□□□ -0.71
RETREG3-201ENST00000309428 FOXA3P55318 350 aaPredicted RBP10.63□□□□□ -0.71
RETREG3-201ENST00000309428 TDRG1Q3Y452 100 aa10.63□□□□□ -0.71
RETREG3-201ENST00000309428 LCN12Q6JVE5 192 aa10.63□□□□□ -0.71
RETREG3-201ENST00000309428 ETV2O00321 342 aaPredicted RBP10.62□□□□□ -0.71
RETREG3-201ENST00000309428 ACACBO00763 2458 aa10.62□□□□□ -0.71
RETREG3-201ENST00000309428 DLEU1O43261 78 aa10.62□□□□□ -0.71
RETREG3-201ENST00000309428 PSPNO60542 156 aa10.62□□□□□ -0.71
RETREG3-201ENST00000309428 WT1P19544 449 aaPredicted RBP10.62□□□□□ -0.71
RETREG3-201ENST00000309428 MMD2Q8IY49 270 aa10.62□□□□□ -0.71
RETREG3-201ENST00000309428 C1QTNF5Q9BXJ0 243 aa10.62□□□□□ -0.71
RETREG3-201ENST00000309428 QTRT1Q9BXR0 403 aaKnown RBP10.62□□□□□ -0.71
RETREG3-201ENST00000309428 NPCDR1Q9BY65 106 aa10.62□□□□□ -0.71
RETREG3-201ENST00000309428 WIPI2Q9Y4P8 454 aa10.62□□□□□ -0.71
RETREG3-201ENST00000309428 SETD2Q9BYW2 2564 aaPredicted RBP10.62□□□□□ -0.71
RETREG3-201ENST00000309428 IGHV3-21A0A0B4J1V1 117 aa10.62□□□□□ -0.71
RETREG3-201ENST00000309428 TMEM250H0YL14 139 aa10.62□□□□□ -0.71
RETREG3-201ENST00000309428 CTSSP25774 331 aa10.62□□□□□ -0.71
RETREG3-201ENST00000309428 RIPPLY2Q5TAB7 128 aa10.62□□□□□ -0.71
RETREG3-201ENST00000309428 LRTM2Q8N967 370 aa10.62□□□□□ -0.71
RETREG3-201ENST00000309428 KLF14Q8TD94 323 aaPredicted RBP10.62□□□□□ -0.71
RETREG3-201ENST00000309428 TMEM106BQ9NUM4 274 aa10.62□□□□□ -0.71
RETREG3-201ENST00000309428 HAND1O96004 215 aa10.62□□□□□ -0.71
RETREG3-201ENST00000309428 HBZP02008 142 aa10.62□□□□□ -0.71
RETREG3-201ENST00000309428 IGHV1-2P23083 117 aa10.62□□□□□ -0.71
RETREG3-201ENST00000309428 UNQ5815/PRO19632Q6UWF5 114 aa10.62□□□□□ -0.71
RETREG3-201ENST00000309428 WFDC8Q8IUA0 241 aa10.62□□□□□ -0.71
RETREG3-201ENST00000309428 ZNF835Q9Y2P0 537 aa10.62□□□□□ -0.71
RETREG3-201ENST00000309428 POLR3KQ9Y2Y1 108 aaPredicted RBP10.62□□□□□ -0.71
RETREG3-201ENST00000309428 A0A1W2PRD5 423 aa10.61□□□□□ -0.71
RETREG3-201ENST00000309428 A0A1W2PRF3 423 aa10.61□□□□□ -0.71
RETREG3-201ENST00000309428 A0A1W2PRM7 423 aa10.61□□□□□ -0.71
RETREG3-201ENST00000309428 PDE6DO43924 150 aa10.61□□□□□ -0.71
RETREG3-201ENST00000309428 IGKV1D-33P01593 117 aa10.61□□□□□ -0.71
RETREG3-201ENST00000309428 IGKV1-33P01594 117 aa10.61□□□□□ -0.71
RETREG3-201ENST00000309428 SRP14P37108 136 aaKnown RBP10.61□□□□□ -0.71
RETREG3-201ENST00000309428 CDKN1AP38936 164 aa10.61□□□□□ -0.71
RETREG3-201ENST00000309428 FAM122AQ96E09 287 aa10.61□□□□□ -0.71
RETREG3-201ENST00000309428 PMCHL2Q9BQD1 86 aa10.61□□□□□ -0.71
RETREG3-201ENST00000309428 RNASE7Q9H1E1 156 aaKnown RBP10.61□□□□□ -0.71
RETREG3-201ENST00000309428 IGKV1-5P01602 117 aa10.61□□□□□ -0.71
RETREG3-201ENST00000309428 FTH1P19P0C7X4 201 aa10.61□□□□□ -0.71
RETREG3-201ENST00000309428 GPR6P46095 362 aaPredicted RBP10.61□□□□□ -0.71
RETREG3-201ENST00000309428 PAX9P55771 341 aa10.61□□□□□ -0.71
RETREG3-201ENST00000309428 UCP2P55851 309 aa10.61□□□□□ -0.71
RETREG3-201ENST00000309428 MOGAT3Q86VF5 341 aa10.61□□□□□ -0.71
RETREG3-201ENST00000309428 PPP1R35Q8TAP8 253 aa10.61□□□□□ -0.71
RETREG3-201ENST00000309428 DOPEY2Q9Y3R5 2298 aa10.61□□□□□ -0.71
RETREG3-201ENST00000309428 CSPG4Q6UVK1 2322 aa10.61□□□□□ -0.71
RETREG3-201ENST00000309428 REG1BP48304 166 aa10.61□□□□□ -0.71
RETREG3-201ENST00000309428 RHOBP62745 196 aa10.61□□□□□ -0.71
RETREG3-201ENST00000309428 OCC1Q8TAD7 63 aa10.61□□□□□ -0.71
RETREG3-201ENST00000309428 OR5P3Q8WZ94 311 aa10.61□□□□□ -0.71
RETREG3-201ENST00000309428 RND1Q92730 232 aa10.61□□□□□ -0.71
RETREG3-201ENST00000309428 BMPR1BO00238 502 aa10.6□□□□□ -0.71
RETREG3-201ENST00000309428 UQCRFS1P47985 274 aa10.6□□□□□ -0.71
RETREG3-201ENST00000309428 CCL8P80075 99 aa10.6□□□□□ -0.71
RETREG3-201ENST00000309428 RNPS1Q15287 305 aaKnown RBP10.6□□□□□ -0.71
RETREG3-201ENST00000309428 ATP6V1FQ16864 119 aa10.6□□□□□ -0.71
RETREG3-201ENST00000309428 GBGT1Q8N5D6 347 aa10.6□□□□□ -0.71
RETREG3-201ENST00000309428 C9orf106Q8NAJ2 232 aa10.6□□□□□ -0.71
RETREG3-201ENST00000309428 CGAP01215 116 aa10.6□□□□□ -0.71
RETREG3-201ENST00000309428 UBE2L3P68036 154 aaKnown RBP10.6□□□□□ -0.71
RETREG3-201ENST00000309428 H1FXQ92522 213 aaKnown RBP10.6□□□□□ -0.71
RETREG3-201ENST00000309428 TAAR6Q96RI8 345 aa10.6□□□□□ -0.71
RETREG3-201ENST00000309428 PSMG3Q9BT73 122 aaPredicted RBP10.6□□□□□ -0.71
RETREG3-201ENST00000309428 ZNRD1Q9P1U0 126 aa10.6□□□□□ -0.71
RETREG3-201ENST00000309428 MARCH11A6NNE9 402 aa10.6□□□□□ -0.71
RETREG3-201ENST00000309428 J3QT63 122 aa10.6□□□□□ -0.71
RETREG3-201ENST00000309428 CHEK1O14757 476 aa10.6□□□□□ -0.71
RETREG3-201ENST00000309428 NUPR1O60356 82 aa10.6□□□□□ -0.71
RETREG3-201ENST00000309428 PFN1P07737 140 aaKnown RBP10.6□□□□□ -0.71
RETREG3-201ENST00000309428 OR8G5Q8NG78 346 aa10.6□□□□□ -0.71
RETREG3-201ENST00000309428 LYPD6BQ8NI32 183 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms