RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 PKDREJQ9NTG1 2253 aa11.31□□□□□ -0.6
SEC23A-201ENST00000307712 TDGF1P3P51864 188 aa11.3□□□□□ -0.6
SEC23A-201ENST00000307712 GABRA6Q16445 453 aa11.3□□□□□ -0.6
SEC23A-201ENST00000307712 ZNF585BQ52M93 769 aa11.3□□□□□ -0.6
SEC23A-201ENST00000307712 GGNQ86UU5 652 aa11.3□□□□□ -0.6
SEC23A-201ENST00000307712 OR13A1Q8NGR1 328 aa11.3□□□□□ -0.6
SEC23A-201ENST00000307712 NABP2Q9BQ15 211 aa11.3□□□□□ -0.6
SEC23A-201ENST00000307712 GSX1Q9H4S2 264 aaPredicted RBP11.3□□□□□ -0.6
SEC23A-201ENST00000307712 WDR83OSQ9Y284 106 aa11.3□□□□□ -0.6
SEC23A-201ENST00000307712 ZNF497Q6ZNH5 498 aa11.3□□□□□ -0.6
SEC23A-201ENST00000307712 FA2HQ7L5A8 372 aa11.3□□□□□ -0.6
SEC23A-201ENST00000307712 OR2T6Q8NHC8 308 aa11.3□□□□□ -0.6
SEC23A-201ENST00000307712 KLF14Q8TD94 323 aaPredicted RBP11.3□□□□□ -0.6
SEC23A-201ENST00000307712 LINC00470Q9BZP3 86 aa11.3□□□□□ -0.6
SEC23A-201ENST00000307712 SPTBN1Q01082 2364 aaKnown RBP11.3□□□□□ -0.6
SEC23A-201ENST00000307712 NKX6-3A6NJ46 265 aa11.3□□□□□ -0.6
SEC23A-201ENST00000307712 IGHV3-48P01763 117 aa11.3□□□□□ -0.6
SEC23A-201ENST00000307712 GATA2P23769 480 aaPredicted RBP11.3□□□□□ -0.6
SEC23A-201ENST00000307712 SCRT1Q9BWW7 348 aa11.3□□□□□ -0.6
SEC23A-201ENST00000307712 PARD6GQ9BYG4 376 aaPredicted RBP11.3□□□□□ -0.6
SEC23A-201ENST00000307712 LAMTOR2Q9Y2Q5 125 aa11.3□□□□□ -0.6
SEC23A-201ENST00000307712 MPV17P39210 176 aa11.29□□□□□ -0.6
SEC23A-201ENST00000307712 HSPE1P61604 102 aaKnown RBP11.29□□□□□ -0.6
SEC23A-201ENST00000307712 PMCHL1Q16048 86 aa11.29□□□□□ -0.6
SEC23A-201ENST00000307712 DCAF10Q5QP82 559 aa11.29□□□□□ -0.6
SEC23A-201ENST00000307712 PDPNQ86YL7 162 aa11.29□□□□□ -0.6
SEC23A-201ENST00000307712 DCAF16Q9NXF7 216 aa11.29□□□□□ -0.6
SEC23A-201ENST00000307712 ELOVL5Q9NYP7 299 aa11.29□□□□□ -0.6
SEC23A-201ENST00000307712 BDP1A6H8Y1 2624 aa11.29□□□□□ -0.6
SEC23A-201ENST00000307712 AMY1AP04745 511 aa11.29□□□□□ -0.6
SEC23A-201ENST00000307712 IGFBP2P18065 325 aa11.29□□□□□ -0.6
SEC23A-201ENST00000307712 TIMP3P35625 211 aa11.29□□□□□ -0.6
SEC23A-201ENST00000307712 AARDQ4LEZ3 155 aa11.29□□□□□ -0.6
SEC23A-201ENST00000307712 HAPLN4Q86UW8 402 aa11.29□□□□□ -0.6
SEC23A-201ENST00000307712 ST6GALNAC6Q969X2 333 aa11.29□□□□□ -0.6
SEC23A-201ENST00000307712 TMEM45BQ96B21 275 aa11.29□□□□□ -0.6
SEC23A-201ENST00000307712 PRNDQ9UKY0 176 aa11.29□□□□□ -0.6
SEC23A-201ENST00000307712 AKAP6Q13023 2319 aa11.29□□□□□ -0.6
SEC23A-201ENST00000307712 LOC102723996A0A087X1L8 192 aa11.29□□□□□ -0.6
SEC23A-201ENST00000307712 IGKV1-39P01597 117 aa11.29□□□□□ -0.6
SEC23A-201ENST00000307712 IGKV1D-39P04432 117 aa11.29□□□□□ -0.6
SEC23A-201ENST00000307712 CELA3BP08861 270 aa11.29□□□□□ -0.6
SEC23A-201ENST00000307712 NTF4P34130 210 aa11.29□□□□□ -0.6
SEC23A-201ENST00000307712 FOXL1Q12952 345 aa11.29□□□□□ -0.6
SEC23A-201ENST00000307712 SRSF7Q16629 238 aaKnown RBP eCLIP11.29□□□□□ -0.64e-11■□□□□ 8.4
SEC23A-201ENST00000307712 SMIM15Q7Z3B0 74 aa11.29□□□□□ -0.6
SEC23A-201ENST00000307712 OR1B1Q8NGR6 318 aa11.29□□□□□ -0.6
SEC23A-201ENST00000307712 PRSS3P2Q8NHM4 247 aa11.29□□□□□ -0.6
SEC23A-201ENST00000307712 SARAFQ96BY9 339 aa11.29□□□□□ -0.6
SEC23A-201ENST00000307712 ZPBPQ9BS86 351 aa11.29□□□□□ -0.6
SEC23A-201ENST00000307712 ZNF355PQ9NSJ1 428 aa11.29□□□□□ -0.6
SEC23A-201ENST00000307712 KLF7O75840 302 aaPredicted RBP11.28□□□□□ -0.6
SEC23A-201ENST00000307712 TCTAP57738 103 aa11.28□□□□□ -0.6
SEC23A-201ENST00000307712 MIR17HGQ75NE6 70 aa11.28□□□□□ -0.6
SEC23A-201ENST00000307712 ADTRPQ96IZ2 230 aa11.28□□□□□ -0.6
SEC23A-201ENST00000307712 SAP30LQ9HAJ7 183 aa11.28□□□□□ -0.6
SEC23A-201ENST00000307712 CACNA1HO95180 2353 aa11.28□□□□□ -0.6
SEC23A-201ENST00000307712 SMPD2O60906 423 aa11.28□□□□□ -0.6
SEC23A-201ENST00000307712 CA2P00918 260 aa11.28□□□□□ -0.6
SEC23A-201ENST00000307712 APELAP0DMC3 54 aa11.28□□□□□ -0.6
SEC23A-201ENST00000307712 CT45A10P0DMU9 189 aa11.28□□□□□ -0.6
SEC23A-201ENST00000307712 SLC35E4Q6ICL7 350 aa11.28□□□□□ -0.6
SEC23A-201ENST00000307712 Q6ZS49 121 aa11.28□□□□□ -0.6
SEC23A-201ENST00000307712 SSX8Q7RTT4 187 aa11.28□□□□□ -0.6
SEC23A-201ENST00000307712 BCL2L2Q92843 193 aaPredicted RBP11.28□□□□□ -0.6
SEC23A-201ENST00000307712 DYNLRB1Q9NP97 96 aa11.28□□□□□ -0.6
SEC23A-201ENST00000307712 TRBV9A0A0B4J1U6 114 aa11.28□□□□□ -0.6
SEC23A-201ENST00000307712 PINLYPA6NC86 204 aa11.28□□□□□ -0.6
SEC23A-201ENST00000307712 P01737 135 aa11.28□□□□□ -0.6
SEC23A-201ENST00000307712 LINC00869P0C866 280 aa11.28□□□□□ -0.6
SEC23A-201ENST00000307712 HIST1H1EP10412 219 aaKnown RBP11.28□□□□□ -0.6
SEC23A-201ENST00000307712 REG1BP48304 166 aa11.28□□□□□ -0.6
SEC23A-201ENST00000307712 FOXA3P55318 350 aaPredicted RBP11.28□□□□□ -0.6
SEC23A-201ENST00000307712 NHLH1Q02575 133 aa11.28□□□□□ -0.6
SEC23A-201ENST00000307712 OR4A47Q6IF82 309 aa11.28□□□□□ -0.6
SEC23A-201ENST00000307712 ISLRO14498 428 aa11.28□□□□□ -0.6
SEC23A-201ENST00000307712 MGST3O14880 152 aa11.28□□□□□ -0.6
SEC23A-201ENST00000307712 ARL3P36405 182 aa11.28□□□□□ -0.6
SEC23A-201ENST00000307712 C10orf113Q5VZT2 155 aa11.28□□□□□ -0.6
SEC23A-201ENST00000307712 OR8B2Q96RD0 313 aa11.28□□□□□ -0.6
SEC23A-201ENST00000307712 PAXXQ9BUH6 204 aa11.28□□□□□ -0.6
SEC23A-201ENST00000307712 FREM1Q5H8C1 2179 aa11.28□□□□□ -0.6
SEC23A-201ENST00000307712 K7EQM0 130 aa11.27□□□□□ -0.6
SEC23A-201ENST00000307712 PSG7Q13046 419 aa11.27□□□□□ -0.6
SEC23A-201ENST00000307712 DHRS13Q6UX07 377 aa11.27□□□□□ -0.6
SEC23A-201ENST00000307712 OR1L4Q8NGR5 311 aa11.27□□□□□ -0.6
SEC23A-201ENST00000307712 EAF1Q96JC9 268 aaPredicted RBP11.27□□□□□ -0.6
SEC23A-201ENST00000307712 HARBI1Q96MB7 349 aa11.27□□□□□ -0.6
SEC23A-201ENST00000307712 CRIM1Q9NZV1 1036 aa11.27□□□□□ -0.6
SEC23A-201ENST00000307712 CNIH1O95406 144 aa11.27□□□□□ -0.61
SEC23A-201ENST00000307712 OR9G9P0C7N8 305 aa11.27□□□□□ -0.61
SEC23A-201ENST00000307712 NRN1LQ496H8 165 aa11.27□□□□□ -0.61
SEC23A-201ENST00000307712 INO80CQ6PI98 192 aaPredicted RBP11.27□□□□□ -0.61
SEC23A-201ENST00000307712 GNB4Q9HAV0 340 aa11.27□□□□□ -0.61
SEC23A-201ENST00000307712 PCDH15Q96QU1 1955 aa11.27□□□□□ -0.61
SEC23A-201ENST00000307712 NBASA2RRP1 2371 aa11.27□□□□□ -0.61
SEC23A-201ENST00000307712 BMPR1BO00238 502 aa11.27□□□□□ -0.61
SEC23A-201ENST00000307712 PSPNO60542 156 aa11.27□□□□□ -0.61
SEC23A-201ENST00000307712 NPSP0C0P6 89 aa11.27□□□□□ -0.61
SEC23A-201ENST00000307712 OR5AL1P0C617 328 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms