RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 TCRBP04435 133 aa17.52■□□□□ 0.4
HOXD4-201ENST00000306324 CHRNA7P36544 502 aa17.52■□□□□ 0.4
HOXD4-201ENST00000306324 RPL27AP46776 148 aaKnown RBP17.52■□□□□ 0.4
HOXD4-201ENST00000306324 CFHR3Q02985 330 aa17.52■□□□□ 0.4
HOXD4-201ENST00000306324 TMEM268Q5VZI3 342 aa17.52■□□□□ 0.4
HOXD4-201ENST00000306324 TEX38Q6PEX7 206 aa17.52■□□□□ 0.4
HOXD4-201ENST00000306324 RBPMSQ93062 196 aaKnown RBP17.52■□□□□ 0.4
HOXD4-201ENST00000306324 C20orf85Q9H1P6 137 aa17.52■□□□□ 0.4
HOXD4-201ENST00000306324 PPIFP30405 207 aaKnown RBP17.51■□□□□ 0.39
HOXD4-201ENST00000306324 PPP1R1AQ13522 171 aa17.51■□□□□ 0.39
HOXD4-201ENST00000306324 AKIRIN2Q53H80 203 aa17.51■□□□□ 0.39
HOXD4-201ENST00000306324 TCTEX1D4Q5JR98 221 aa17.51■□□□□ 0.39
HOXD4-201ENST00000306324 SELENOHQ8IZQ5 122 aaKnown RBP17.51■□□□□ 0.39
HOXD4-201ENST00000306324 RRNAD1Q96FB5 475 aaKnown RBP17.51■□□□□ 0.39
HOXD4-201ENST00000306324 FYTTD1Q96QD9 318 aaKnown RBP17.51■□□□□ 0.39
HOXD4-201ENST00000306324 SPIN2AQ99865 258 aa17.51■□□□□ 0.39
HOXD4-201ENST00000306324 SPIN2BQ9BPZ2 258 aa17.51■□□□□ 0.39
HOXD4-201ENST00000306324 COMMD5Q9GZQ3 224 aa17.51■□□□□ 0.39
HOXD4-201ENST00000306324 TRAV6A0A075B6T7 132 aa17.5■□□□□ 0.39
HOXD4-201ENST00000306324 ANXA7P20073 488 aaKnown RBP17.5■□□□□ 0.39
HOXD4-201ENST00000306324 DEFA1P59665 94 aa17.5■□□□□ 0.39
HOXD4-201ENST00000306324 DEFA3P59666 94 aa17.5■□□□□ 0.39
HOXD4-201ENST00000306324 OR2B8PP59922 312 aa17.5■□□□□ 0.39
HOXD4-201ENST00000306324 IZUMO4Q1ZYL8 232 aa17.5■□□□□ 0.39
HOXD4-201ENST00000306324 C19orf54Q5BKX5 351 aa17.5■□□□□ 0.39
HOXD4-201ENST00000306324 KHDC1LQ5JSQ8 128 aa17.5■□□□□ 0.39
HOXD4-201ENST00000306324 CADM3Q8N126 398 aa17.5■□□□□ 0.39
HOXD4-201ENST00000306324 COMMD1Q8N668 190 aa17.5■□□□□ 0.39
HOXD4-201ENST00000306324 MINDY2Q8NBR6 621 aa17.5■□□□□ 0.39
HOXD4-201ENST00000306324 OR4A16Q8NH70 328 aa17.5■□□□□ 0.39
HOXD4-201ENST00000306324 CASTOR1Q8WTX7 329 aa17.5■□□□□ 0.39
HOXD4-201ENST00000306324 TMEM56Q96MV1 263 aa17.5■□□□□ 0.39
HOXD4-201ENST00000306324 CITED2Q99967 270 aaPredicted RBP17.5■□□□□ 0.39
HOXD4-201ENST00000306324 NUDT15Q9NV35 164 aa17.5■□□□□ 0.39
HOXD4-201ENST00000306324 FOXA2Q9Y261 457 aaPredicted RBP17.5■□□□□ 0.39
HOXD4-201ENST00000306324 TMEM56-RWDD3S4R434 201 aa17.5■□□□□ 0.39
HOXD4-201ENST00000306324 TCRBV4S1A1TA0A5B7 111 aa17.5■□□□□ 0.39
HOXD4-201ENST00000306324 E7EUB6 86 aa17.5■□□□□ 0.39
HOXD4-201ENST00000306324 RBMXL2O75526 392 aaKnown RBP17.5■□□□□ 0.39
HOXD4-201ENST00000306324 IGHG4P01861 327 aa17.5■□□□□ 0.39
HOXD4-201ENST00000306324 UBE2MP61081 183 aaKnown RBP17.5■□□□□ 0.39
HOXD4-201ENST00000306324 OR5T1Q8NG75 326 aa17.5■□□□□ 0.39
HOXD4-201ENST00000306324 ENKURQ8TC29 256 aa17.5■□□□□ 0.39
HOXD4-201ENST00000306324 SFT2D2O95562 160 aa17.49■□□□□ 0.39
HOXD4-201ENST00000306324 SRPXP78539 464 aa17.49■□□□□ 0.39
HOXD4-201ENST00000306324 CD83Q01151 205 aa17.49■□□□□ 0.39
HOXD4-201ENST00000306324 LCNL1Q6ZST4 164 aa17.49■□□□□ 0.39
HOXD4-201ENST00000306324 LGI3Q8N145 548 aa17.49■□□□□ 0.39
HOXD4-201ENST00000306324 PRNDQ9UKY0 176 aa17.49■□□□□ 0.39
HOXD4-201ENST00000306324 OR51B2Q9Y5P1 312 aa17.49■□□□□ 0.39
HOXD4-201ENST00000306324 HMX3A6NHT5 357 aa17.48■□□□□ 0.39
HOXD4-201ENST00000306324 C15orf61A6NNL5 157 aa17.48■□□□□ 0.39
HOXD4-201ENST00000306324 SOX15O60248 233 aa17.48■□□□□ 0.39
HOXD4-201ENST00000306324 HLA-AP01891 365 aaKnown RBP17.48■□□□□ 0.39
HOXD4-201ENST00000306324 FGF2P09038 288 aa17.48■□□□□ 0.39
HOXD4-201ENST00000306324 OR4E1P0C645 316 aa17.48■□□□□ 0.39
HOXD4-201ENST00000306324 PF4V1P10720 104 aa17.48■□□□□ 0.39
HOXD4-201ENST00000306324 FOXE3Q13461 319 aa17.48■□□□□ 0.39
HOXD4-201ENST00000306324 C4orf46Q504U0 113 aa17.48■□□□□ 0.39
HOXD4-201ENST00000306324 CXorf66Q5JRM2 361 aaPredicted RBP17.48■□□□□ 0.39
HOXD4-201ENST00000306324 ASPHD1Q5U4P2 390 aa17.48■□□□□ 0.39
HOXD4-201ENST00000306324 TMEM65Q6PI78 240 aa17.48■□□□□ 0.39
HOXD4-201ENST00000306324 SLC35G3Q8N808 338 aa17.48■□□□□ 0.39
HOXD4-201ENST00000306324 IL22RA2Q969J5 263 aa17.48■□□□□ 0.39
HOXD4-201ENST00000306324 TMEM68Q96MH6 324 aa17.48■□□□□ 0.39
HOXD4-201ENST00000306324 FKBP11Q9NYL4 201 aa17.48■□□□□ 0.39
HOXD4-201ENST00000306324 A0A0G2JRQ6 117 aa17.47■□□□□ 0.39
HOXD4-201ENST00000306324 A0A1W2PRX2 142 aa17.47■□□□□ 0.39
HOXD4-201ENST00000306324 DBX1A6NMT0 343 aa17.47■□□□□ 0.39
HOXD4-201ENST00000306324 IGLV1-40P01703 118 aa17.47■□□□□ 0.39
HOXD4-201ENST00000306324 ELANEP08246 267 aa17.47■□□□□ 0.39
HOXD4-201ENST00000306324 P0C879 139 aa17.47■□□□□ 0.39
HOXD4-201ENST00000306324 NSUN5P1Q3KNT7 163 aa17.47■□□□□ 0.39
HOXD4-201ENST00000306324 OR5M8Q8NGP6 311 aa17.47■□□□□ 0.39
HOXD4-201ENST00000306324 HINT2Q9BX68 163 aa17.47■□□□□ 0.39
HOXD4-201ENST00000306324 ZNF355PQ9NSJ1 428 aa17.47■□□□□ 0.39
HOXD4-201ENST00000306324 TEX50A0A1B0GTY4 177 aa17.46■□□□□ 0.39
HOXD4-201ENST00000306324 A0A1B0GW64 132 aa17.46■□□□□ 0.39
HOXD4-201ENST00000306324 C9orf170A2RU37 121 aa17.46■□□□□ 0.39
HOXD4-201ENST00000306324 TEX22C9J3V5 150 aa17.46■□□□□ 0.39
HOXD4-201ENST00000306324 RPLP1P05386 114 aaKnown RBP17.46■□□□□ 0.39
HOXD4-201ENST00000306324 H2AFB2P0C5Z0 115 aa17.46■□□□□ 0.39
HOXD4-201ENST00000306324 PSMB8P28062 276 aa17.46■□□□□ 0.39
HOXD4-201ENST00000306324 RAB25P57735 213 aa17.46■□□□□ 0.39
HOXD4-201ENST00000306324 ANKRD55Q3KP44 614 aa17.46■□□□□ 0.39
HOXD4-201ENST00000306324 NRARPQ7Z6K4 114 aa17.46■□□□□ 0.39
HOXD4-201ENST00000306324 FAM219AQ8IW50 185 aa17.46■□□□□ 0.39
HOXD4-201ENST00000306324 OR1L8Q8NGR8 309 aa17.46■□□□□ 0.39
HOXD4-201ENST00000306324 QTRT1Q9BXR0 403 aaKnown RBP17.46■□□□□ 0.39
HOXD4-201ENST00000306324 TMEM14BQ9NUH8 114 aa17.46■□□□□ 0.39
HOXD4-201ENST00000306324 COA4Q9NYJ1 87 aa17.46■□□□□ 0.39
HOXD4-201ENST00000306324 CGB1A6NKQ9 187 aa17.45■□□□□ 0.38
HOXD4-201ENST00000306324 DHRS2Q13268 280 aa17.45■□□□□ 0.38
HOXD4-201ENST00000306324 LYZL2Q7Z4W2 148 aa17.45■□□□□ 0.38
HOXD4-201ENST00000306324 MS4A10Q96PG2 267 aa17.45■□□□□ 0.38
HOXD4-201ENST00000306324 KLK15Q9H2R5 256 aa17.45■□□□□ 0.38
HOXD4-201ENST00000306324 TSSC4Q9Y5U2 329 aaPredicted RBP17.45■□□□□ 0.38
HOXD4-201ENST00000306324 A0A0B4J293 547 aa17.44■□□□□ 0.38
HOXD4-201ENST00000306324 A0A0B4J2A0 478 aa17.44■□□□□ 0.38
HOXD4-201ENST00000306324 TRAPPC2P0DI81 140 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms