RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 PROB1E7EW31 1015 aa13.46□□□□□ -0.25
USP42-201ENST00000306177 GCGP01275 180 aa13.46□□□□□ -0.25
USP42-201ENST00000306177 MEF2CQ06413 473 aaPredicted RBP13.46□□□□□ -0.25
USP42-201ENST00000306177 PEAR1Q5VY43 1037 aaPredicted RBP13.46□□□□□ -0.25
USP42-201ENST00000306177 C17orf82Q86X59 251 aaPredicted RBP13.46□□□□□ -0.25
USP42-201ENST00000306177 PGLYRP4Q96LB8 373 aa13.46□□□□□ -0.25
USP42-201ENST00000306177 LOC102724200A0A096LPH7 203 aaPredicted RBP13.46□□□□□ -0.25
USP42-201ENST00000306177 WBP1Q96G27 269 aa13.46□□□□□ -0.25
USP42-201ENST00000306177 NPCDR1Q9BY65 106 aa13.46□□□□□ -0.26
USP42-201ENST00000306177 DEPPQ9NTK1 212 aa13.46□□□□□ -0.26
USP42-201ENST00000306177 DPM3Q9P2X0 92 aa13.46□□□□□ -0.26
USP42-201ENST00000306177 FBLN5Q9UBX5 448 aa13.46□□□□□ -0.26
USP42-201ENST00000306177 C17orf98A8MV24 154 aa13.45□□□□□ -0.26
USP42-201ENST00000306177 CCL1P22362 96 aa13.45□□□□□ -0.26
USP42-201ENST00000306177 GPR179Q6PRD1 2367 aa13.45□□□□□ -0.26
USP42-201ENST00000306177 RALGAPA1Q6GYQ0 2036 aa13.45□□□□□ -0.26
USP42-201ENST00000306177 IL6RP08887 468 aaPredicted RBP13.45□□□□□ -0.26
USP42-201ENST00000306177 CSRP1P21291 193 aaKnown RBP13.45□□□□□ -0.26
USP42-201ENST00000306177 NPPCP23582 126 aa13.45□□□□□ -0.26
USP42-201ENST00000306177 WDR25Q64LD2 544 aaPredicted RBP13.45□□□□□ -0.26
USP42-201ENST00000306177 CYP2G1PQ6ZSU1 146 aa13.45□□□□□ -0.26
USP42-201ENST00000306177 NR2C2APQ86WQ0 139 aa13.45□□□□□ -0.26
USP42-201ENST00000306177 OR1P1Q8NH06 330 aa13.45□□□□□ -0.26
USP42-201ENST00000306177 MSGN1A6NI15 193 aa13.45□□□□□ -0.26
USP42-201ENST00000306177 TMEM250H0YL14 139 aa13.45□□□□□ -0.26
USP42-201ENST00000306177 MOSP00540 346 aa13.45□□□□□ -0.26
USP42-201ENST00000306177 IGHV3-48P01763 117 aa13.45□□□□□ -0.26
USP42-201ENST00000306177 IL4P05112 153 aa13.45□□□□□ -0.26
USP42-201ENST00000306177 SSBP3Q9BWW4 388 aaPredicted RBP13.45□□□□□ -0.26
USP42-201ENST00000306177 RPRMQ9NS64 109 aa13.45□□□□□ -0.26
USP42-201ENST00000306177 UTRNP46939 3433 aa13.45□□□□□ -0.26
USP42-201ENST00000306177 ANOS1P23352 680 aa13.45□□□□□ -0.26
USP42-201ENST00000306177 CX3CL1P78423 397 aa13.45□□□□□ -0.26
USP42-201ENST00000306177 OR4A47Q6IF82 309 aa13.45□□□□□ -0.26
USP42-201ENST00000306177 SRSF12Q8WXF0 261 aaKnown RBP13.45□□□□□ -0.26
USP42-201ENST00000306177 VWA8A3KMH1 1905 aa13.45□□□□□ -0.26
USP42-201ENST00000306177 ZNF98A6NK75 572 aa13.44□□□□□ -0.26
USP42-201ENST00000306177 J3QRE1 110 aa13.44□□□□□ -0.26
USP42-201ENST00000306177 ZNF506Q5JVG8 444 aa13.44□□□□□ -0.26
USP42-201ENST00000306177 RNFT1Q5M7Z0 435 aa13.44□□□□□ -0.26
USP42-201ENST00000306177 IFI27L2Q9H2X8 130 aa13.44□□□□□ -0.26
USP42-201ENST00000306177 BTF3P20290 206 aaKnown RBP13.44□□□□□ -0.26
USP42-201ENST00000306177 C17orf100A8MU93 164 aa13.44□□□□□ -0.26
USP42-201ENST00000306177 H3BTX0 84 aa13.44□□□□□ -0.26
USP42-201ENST00000306177 CD59P13987 128 aa13.44□□□□□ -0.26
USP42-201ENST00000306177 LINC00305Q7Z4B0 112 aa13.44□□□□□ -0.26
USP42-201ENST00000306177 RTN4RL2Q86UN3 420 aa13.44□□□□□ -0.26
USP42-201ENST00000306177 RCC1LQ96I51 464 aaKnown RBP13.44□□□□□ -0.26
USP42-201ENST00000306177 ZSWIM8A7E2V4 1837 aa13.44□□□□□ -0.26
USP42-201ENST00000306177 RRHO14718 337 aa13.44□□□□□ -0.26
USP42-201ENST00000306177 ZNF207O43670 478 aaKnown RBP13.44□□□□□ -0.26
USP42-201ENST00000306177 DDB2Q92466 427 aa13.44□□□□□ -0.26
USP42-201ENST00000306177 PHLDA3Q9Y5J5 127 aa13.44□□□□□ -0.26
USP42-201ENST00000306177 LINC00312Q9Y6C7 94 aa13.43□□□□□ -0.26
USP42-201ENST00000306177 OR4B1Q8NGF8 309 aa13.43□□□□□ -0.26
USP42-201ENST00000306177 MARVELD3Q96A59 401 aa13.43□□□□□ -0.26
USP42-201ENST00000306177 CA7P43166 264 aa13.43□□□□□ -0.26
USP42-201ENST00000306177 SFRP2Q96HF1 295 aa13.43□□□□□ -0.26
USP42-201ENST00000306177 LYZL4Q96KX0 146 aa13.43□□□□□ -0.26
USP42-201ENST00000306177 ATG101Q9BSB4 218 aa13.43□□□□□ -0.26
USP42-201ENST00000306177 IGHV3OR16-10A0A075B7F0 116 aa13.43□□□□□ -0.26
USP42-201ENST00000306177 OR4C46A6NHA9 309 aa13.43□□□□□ -0.26
USP42-201ENST00000306177 NMUP48645 174 aa13.43□□□□□ -0.26
USP42-201ENST00000306177 DCTN5Q9BTE1 182 aa13.43□□□□□ -0.26
USP42-201ENST00000306177 M0R3E3 92 aa13.43□□□□□ -0.26
USP42-201ENST00000306177 GOLT1AQ6ZVE7 132 aa13.43□□□□□ -0.26
USP42-201ENST00000306177 TRBV6-7A0A0A0MS04 114 aa13.42□□□□□ -0.26
USP42-201ENST00000306177 PRR32B1ATL7 298 aa13.42□□□□□ -0.26
USP42-201ENST00000306177 NPIPB6E9PJ23 425 aa13.42□□□□□ -0.26
USP42-201ENST00000306177 RPLP1P05386 114 aaKnown RBP13.42□□□□□ -0.26
USP42-201ENST00000306177 FBXL15Q9H469 300 aa13.42□□□□□ -0.26
USP42-201ENST00000306177 IGKV1-9A0A0C4DH69 117 aa13.42□□□□□ -0.26
USP42-201ENST00000306177 RRN3P1Q2M238 152 aa13.42□□□□□ -0.26
USP42-201ENST00000306177 FAM53AQ6NSI3 398 aaPredicted RBP13.42□□□□□ -0.26
USP42-201ENST00000306177 PLPPR1Q8TBJ4 325 aa13.42□□□□□ -0.26
USP42-201ENST00000306177 SLC25A28Q96A46 364 aa13.42□□□□□ -0.26
USP42-201ENST00000306177 RAX2Q96IS3 184 aa13.42□□□□□ -0.26
USP42-201ENST00000306177 MAP1LC3AQ9H492 121 aa13.42□□□□□ -0.26
USP42-201ENST00000306177 LEPROTL1O95214 131 aa13.42□□□□□ -0.26
USP42-201ENST00000306177 VENTXO95231 258 aa13.42□□□□□ -0.26
USP42-201ENST00000306177 MST1P26927 711 aa13.42□□□□□ -0.26
USP42-201ENST00000306177 OR1N2Q8NGR9 330 aa13.42□□□□□ -0.26
USP42-201ENST00000306177 SGK494Q96LW2 274 aa13.42□□□□□ -0.26
USP42-201ENST00000306177 TRBV9A0A0B4J1U6 114 aa13.41□□□□□ -0.26
USP42-201ENST00000306177 HIST1H2BAQ96A08 127 aa13.41□□□□□ -0.26
USP42-201ENST00000306177 GPX1P07203 203 aa13.41□□□□□ -0.26
USP42-201ENST00000306177 C2orf83Q53S99 150 aa13.41□□□□□ -0.26
USP42-201ENST00000306177 CENPWQ5EE01 88 aa13.41□□□□□ -0.26
USP42-201ENST00000306177 ZNF502Q8TBZ5 544 aa13.41□□□□□ -0.26
USP42-201ENST00000306177 MPTX1A8MV57 137 aa13.41□□□□□ -0.26
USP42-201ENST00000306177 TSPOP30536 169 aa13.41□□□□□ -0.26
USP42-201ENST00000306177 LCN2P80188 198 aa13.41□□□□□ -0.26
USP42-201ENST00000306177 PMCHL1Q16048 86 aa13.41□□□□□ -0.26
USP42-201ENST00000306177 PINLYPA6NC86 204 aa13.4□□□□□ -0.26
USP42-201ENST00000306177 CRXO43186 299 aaPredicted RBP13.4□□□□□ -0.26
USP42-201ENST00000306177 IGKV1D-33P01593 117 aa13.4□□□□□ -0.26
USP42-201ENST00000306177 IGKV1-33P01594 117 aa13.4□□□□□ -0.26
USP42-201ENST00000306177 MRPL20Q9BYC9 149 aaKnown RBP13.4□□□□□ -0.26
USP42-201ENST00000306177 A0A087WV48 116 aa13.4□□□□□ -0.26
USP42-201ENST00000306177 SRIP30626 198 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms