RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 CTSSP25774 331 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 RELBQ01201 579 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 FOXF2Q12947 444 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 AMMECR1LQ6DCA0 310 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 WDR73Q6P4I2 378 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 BHLHA15Q7RTS1 189 aaPredicted RBP9.17□□□□□ -0.94
LSM3-201ENST00000306024 MDP1Q86V88 176 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 WDFY1Q8IWB7 410 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 MKXQ8IYA7 352 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 APOBEC3DQ96AK3 386 aaPredicted RBP9.17□□□□□ -0.94
LSM3-201ENST00000306024 TMEM56Q96MV1 263 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 TMEM56-RWDD3S4R434 201 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 KIAA2026Q5HYC2 2103 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 ODAMA1E959 279 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 HS3ST1O14792 307 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 USF1P22415 310 aaPredicted RBP9.17□□□□□ -0.94
LSM3-201ENST00000306024 ATP5G3P48201 142 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 RPL24P83731 157 aaKnown RBP9.17□□□□□ -0.94
LSM3-201ENST00000306024 CXorf67Q86X51 503 aaPredicted RBP9.17□□□□□ -0.94
LSM3-201ENST00000306024 ELOVL5Q9NYP7 299 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 CDC42EP3Q9UKI2 254 aa9.17□□□□□ -0.94
LSM3-201ENST00000306024 FAM208BQ5VWN6 2430 aa9.16□□□□□ -0.94
LSM3-201ENST00000306024 K7EP13 123 aa9.16□□□□□ -0.94
LSM3-201ENST00000306024 S1PR2O95136 353 aa9.16□□□□□ -0.94
LSM3-201ENST00000306024 LCN12Q6JVE5 192 aa9.16□□□□□ -0.94
LSM3-201ENST00000306024 LINC01551Q86U37 167 aa9.16□□□□□ -0.94
LSM3-201ENST00000306024 NGBQ9NPG2 151 aa9.16□□□□□ -0.94
LSM3-201ENST00000306024 ZFYVE26Q68DK2 2539 aa9.16□□□□□ -0.94
LSM3-201ENST00000306024 TRAPPC2LH3BP13 241 aa9.16□□□□□ -0.94
LSM3-201ENST00000306024 DEFA4P12838 97 aa9.16□□□□□ -0.94
LSM3-201ENST00000306024 UCP1P25874 307 aa9.16□□□□□ -0.94
LSM3-201ENST00000306024 GABRA6Q16445 453 aa9.16□□□□□ -0.94
LSM3-201ENST00000306024 ARHGAP21Q5T5U3 1957 aa9.16□□□□□ -0.94
LSM3-201ENST00000306024 NCOA6Q14686 2063 aaPredicted RBP9.16□□□□□ -0.94
LSM3-201ENST00000306024 NTF4P34130 210 aa9.16□□□□□ -0.94
LSM3-201ENST00000306024 TIGITQ495A1 244 aa9.16□□□□□ -0.94
LSM3-201ENST00000306024 SPINK9Q5DT21 86 aa9.16□□□□□ -0.94
LSM3-201ENST00000306024 Q6ZT83 130 aa9.16□□□□□ -0.94
LSM3-201ENST00000306024 Q8NFD4 153 aa9.16□□□□□ -0.94
LSM3-201ENST00000306024 QTRT1Q9BXR0 403 aaKnown RBP9.16□□□□□ -0.94
LSM3-201ENST00000306024 CSTL1Q9H114 145 aa9.16□□□□□ -0.94
LSM3-201ENST00000306024 TMEM8BA6NDV4 472 aa9.15□□□□□ -0.94
LSM3-201ENST00000306024 H0Y980 276 aa9.15□□□□□ -0.94
LSM3-201ENST00000306024 OR8B8Q15620 311 aa9.15□□□□□ -0.94
LSM3-201ENST00000306024 TMEM108Q6UXF1 575 aa9.15□□□□□ -0.94
LSM3-201ENST00000306024 ZDHHC23Q8IYP9 409 aa9.15□□□□□ -0.94
LSM3-201ENST00000306024 SAXO1Q8IYX7 474 aa9.15□□□□□ -0.94
LSM3-201ENST00000306024 OR5B3Q8NH48 314 aa9.15□□□□□ -0.94
LSM3-201ENST00000306024 PLPPR1Q8TBJ4 325 aa9.15□□□□□ -0.94
LSM3-201ENST00000306024 DERL1Q9BUN8 251 aa9.15□□□□□ -0.94
LSM3-201ENST00000306024 SS18L1O75177 396 aaPredicted RBP9.15□□□□□ -0.94
LSM3-201ENST00000306024 PGLYRP1O75594 196 aaPredicted RBP9.15□□□□□ -0.94
LSM3-201ENST00000306024 NDUFB8O95169 186 aa9.15□□□□□ -0.94
LSM3-201ENST00000306024 OTX1P32242 354 aaPredicted RBP9.15□□□□□ -0.94
LSM3-201ENST00000306024 NPBWR2P48146 333 aa9.15□□□□□ -0.94
LSM3-201ENST00000306024 KCNMB1Q16558 191 aa9.15□□□□□ -0.94
LSM3-201ENST00000306024 GNB4Q9HAV0 340 aa9.15□□□□□ -0.94
LSM3-201ENST00000306024 OBP2BQ9NPH6 170 aa9.15□□□□□ -0.94
LSM3-201ENST00000306024 EXPH5Q8NEV8 1989 aa9.15□□□□□ -0.95
LSM3-201ENST00000306024 TRAV38-1A0A0B4J264 116 aa9.15□□□□□ -0.95
LSM3-201ENST00000306024 IGHV2-70DA0A0C4DH43 119 aa9.15□□□□□ -0.95
LSM3-201ENST00000306024 C5orf63A6NC05 138 aa9.15□□□□□ -0.95
LSM3-201ENST00000306024 TIMM8AO60220 97 aaPredicted RBP9.15□□□□□ -0.95
LSM3-201ENST00000306024 GPX1P07203 203 aa9.15□□□□□ -0.95
LSM3-201ENST00000306024 C3orf79P0CE67 100 aa9.15□□□□□ -0.95
LSM3-201ENST00000306024 KIR2DL2P43627 348 aaPredicted RBP9.15□□□□□ -0.95
LSM3-201ENST00000306024 FOXL1Q12952 345 aa9.15□□□□□ -0.95
LSM3-201ENST00000306024 MMD2Q8IY49 270 aa9.15□□□□□ -0.95
LSM3-201ENST00000306024 ZNF611Q8N823 705 aa9.15□□□□□ -0.95
LSM3-201ENST00000306024 LIN7CQ9NUP9 197 aaKnown RBP9.15□□□□□ -0.95
LSM3-201ENST00000306024 TAAR3PQ9P1P4 343 aa9.15□□□□□ -0.95
LSM3-201ENST00000306024 DMXL1Q9Y485 3027 aa9.14□□□□□ -0.95
LSM3-201ENST00000306024 EPG5Q9HCE0 2579 aa9.14□□□□□ -0.95
LSM3-201ENST00000306024 IGHV1-69-2A0A0G2JMI3 117 aa9.14□□□□□ -0.95
LSM3-201ENST00000306024 RPRMLQ8N4K4 120 aa9.14□□□□□ -0.95
LSM3-201ENST00000306024 SFXN3Q9BWM7 321 aa9.14□□□□□ -0.95
LSM3-201ENST00000306024 NMSQ5H8A3 153 aa9.14□□□□□ -0.95
LSM3-201ENST00000306024 ACSM6Q6P461 480 aa9.14□□□□□ -0.95
LSM3-201ENST00000306024 C19orf35Q6ZS72 473 aa9.14□□□□□ -0.95
LSM3-201ENST00000306024 DOLPP1Q86YN1 238 aa9.14□□□□□ -0.95
LSM3-201ENST00000306024 KCNS1Q96KK3 526 aa9.14□□□□□ -0.95
LSM3-201ENST00000306024 PKD1L2Q7Z442 2459 aa9.14□□□□□ -0.95
LSM3-201ENST00000306024 MED12LQ86YW9 2145 aa9.14□□□□□ -0.95
LSM3-201ENST00000306024 IGKV1D-13A0A0B4J2D9 117 aa9.14□□□□□ -0.95
LSM3-201ENST00000306024 IGHV3-64DA0A0J9YX35 117 aa9.14□□□□□ -0.95
LSM3-201ENST00000306024 F2Z2F3 143 aa9.14□□□□□ -0.95
LSM3-201ENST00000306024 GNG7O60262 68 aa9.14□□□□□ -0.95
LSM3-201ENST00000306024 IGKV1-13P0DP09 117 aa9.14□□□□□ -0.95
LSM3-201ENST00000306024 RAC2P15153 192 aa9.14□□□□□ -0.95
LSM3-201ENST00000306024 IGHV1-2P23083 117 aa9.14□□□□□ -0.95
LSM3-201ENST00000306024 FUT6P51993 359 aa9.14□□□□□ -0.95
LSM3-201ENST00000306024 RPL15P61313 204 aaKnown RBP9.14□□□□□ -0.95
LSM3-201ENST00000306024 MPV17L2Q567V2 206 aa9.14□□□□□ -0.95
LSM3-201ENST00000306024 C12orf54Q6X4T0 127 aa9.14□□□□□ -0.95
LSM3-201ENST00000306024 GAGE12BA1L429 117 aa9.13□□□□□ -0.95
LSM3-201ENST00000306024 C16orf97H3BN30 126 aa9.13□□□□□ -0.95
LSM3-201ENST00000306024 ZNF324O75467 553 aaPredicted RBP9.13□□□□□ -0.95
LSM3-201ENST00000306024 MT-ND6P03923 174 aa9.13□□□□□ -0.95
LSM3-201ENST00000306024 ARL16Q0P5N6 197 aa9.13□□□□□ -0.95
LSM3-201ENST00000306024 ZNF816Q0VGE8 651 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms