RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 MRPL27Q9P0M9 148 aaKnown RBP4.46□□□□□ -1.7
VPS50-202ENST00000305866 JPT1Q9UK76 154 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 LNP1A1A4G5 178 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 BMPR1BO00238 502 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 APOHP02749 345 aaPredicted RBP4.46□□□□□ -1.7
VPS50-202ENST00000305866 SPINK2P20155 84 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 KIR2DL2P43627 348 aaPredicted RBP4.46□□□□□ -1.7
VPS50-202ENST00000305866 PSMB3P49720 205 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 RHOGP84095 191 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 PLP2Q04941 152 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 MAJINQ3KP22 176 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 TCEAL6Q6IPX3 200 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 FAM71F2Q6NXP2 309 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 KIR3DL3Q8N743 410 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 TMEM37Q8WXS4 190 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 SDSLQ96GA7 329 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 TMEM204Q9BSN7 226 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 QTRT1Q9BXR0 403 aaKnown RBP4.46□□□□□ -1.7
VPS50-202ENST00000305866 GNB1LQ9BYB4 327 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 ZFP30Q9Y2G7 519 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 CACNA1GO43497 2377 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 MED13Q9UHV7 2174 aa4.46□□□□□ -1.7
VPS50-202ENST00000305866 TRAV3A0A0B4J244 114 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 GRIFINA4D1Z8 144 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 SRRM5B3KS81 715 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 HMGB3O15347 200 aaKnown RBP4.45□□□□□ -1.7
VPS50-202ENST00000305866 PDE6DO43924 150 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 HAND1O96004 215 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 PDGFBP01127 241 aaPredicted RBP4.45□□□□□ -1.7
VPS50-202ENST00000305866 OTX2P32243 289 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 G6PCP35575 357 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 CX3CL1P78423 397 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 MZT1Q08AG7 82 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 ADIRFQ15847 76 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 SEPSECSQ9HD40 501 aaKnown RBP4.45□□□□□ -1.7
VPS50-202ENST00000305866 TACC2O95359 2948 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 HRNRQ86YZ3 2850 aaPredicted RBP4.45□□□□□ -1.7
VPS50-202ENST00000305866 TRAV38-1A0A0B4J264 116 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 C11orf94C9JXX5 98 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 NDUFB4O95168 129 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 TFF1P04155 84 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 CELA3BP08861 270 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 HOXB4P17483 251 aaPredicted RBP4.45□□□□□ -1.7
VPS50-202ENST00000305866 SPRNQ5BIV9 151 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 FAM78BQ5VT40 261 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 OR4P4Q8NGL7 312 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 OR51H1Q8NH63 302 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 LHX4Q969G2 390 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 TMEM18Q96B42 140 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 RPUSD4Q96CM3 377 aaKnown RBP4.45□□□□□ -1.7
VPS50-202ENST00000305866 HES7Q9BYE0 225 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 FAM234AQ9H0X4 552 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 ASCL3Q9NQ33 180 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.45□□□□□ -1.7
VPS50-202ENST00000305866 TP73-AS1Q9UF72 201 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 FOXA2Q9Y261 457 aaPredicted RBP4.45□□□□□ -1.7
VPS50-202ENST00000305866 TRGV5A0A0B4J1U4 118 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 IGHV2-26A0A0B4J1V2 119 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 SRRM4A7MD48 611 aaKnown RBP4.45□□□□□ -1.7
VPS50-202ENST00000305866 PRR33A8MZF0 331 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 IGHV3-13P01766 116 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 CD46P15529 392 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 VAMP2P63027 116 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 MRPL49Q13405 166 aaKnown RBP4.45□□□□□ -1.7
VPS50-202ENST00000305866 OR10J3Q5JRS4 329 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 FFAR4Q5NUL3 377 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 MORN5Q5VZ52 161 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 TEX36Q5VZQ5 186 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 Q71RC1 249 aaPredicted RBP4.45□□□□□ -1.7
VPS50-202ENST00000305866 LYG1Q8N1E2 194 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 NAXEQ8NCW5 288 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 KLF14Q8TD94 323 aaPredicted RBP4.45□□□□□ -1.7
VPS50-202ENST00000305866 FAM168AQ92567 244 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 ZNF414Q96IQ9 312 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 EAF1Q96JC9 268 aaPredicted RBP4.45□□□□□ -1.7
VPS50-202ENST00000305866 BTF3L4Q96K17 158 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 TBX15Q96SF7 602 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 ZNF71Q9NQZ8 489 aaPredicted RBP4.45□□□□□ -1.7
VPS50-202ENST00000305866 TMEM14BQ9NUH8 114 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 SLC25A15Q9Y619 301 aa4.45□□□□□ -1.7
VPS50-202ENST00000305866 A0A1W2PPQ1 181 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 PCNX2A6NKB5 2137 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 GGTLC3B5MD39 225 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 H7BYZ3 331 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 M0QZK8 103 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 CRYAAP02489 173 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 CBLN1P23435 193 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 PLGLB1Q02325 96 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 EBLN2Q6P2I7 272 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 SSX8Q7RTT4 187 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 GATD1Q8NB37 220 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 TMEM178AQ8NBL3 297 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 OR8B3Q8NGG8 313 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 OR8B2Q96RD0 313 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 IFI27L2Q9H2X8 130 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 MS4A5Q9H3V2 200 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 ZNF257Q9Y2Q1 563 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 CABIN1Q9Y6J0 2220 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 IGLC7A0M8Q6 106 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 NKX6-3A6NJ46 265 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms