RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 GLIPR1P48060 266 aa8.87□□□□□ -0.99
CLIP1-201ENST00000302528 ZP4Q12836 540 aa8.87□□□□□ -0.99
CLIP1-201ENST00000302528 PRSS53Q2L4Q9 553 aa8.87□□□□□ -0.99
CLIP1-201ENST00000302528 TMEM30BQ3MIR4 351 aa8.87□□□□□ -0.99
CLIP1-201ENST00000302528 UBE2DNLQ8IWF7 75 aa8.87□□□□□ -0.99
CLIP1-201ENST00000302528 MEGF9Q9H1U4 602 aa8.87□□□□□ -0.99
CLIP1-201ENST00000302528 FBXL7Q9UJT9 491 aa8.87□□□□□ -0.99
CLIP1-201ENST00000302528 A0A1B0GUT8 65 aa8.86□□□□□ -0.99
CLIP1-201ENST00000302528 PSMG4Q5JS54 123 aa8.86□□□□□ -0.99
CLIP1-201ENST00000302528 LRTM2Q8N967 370 aa8.86□□□□□ -0.99
CLIP1-201ENST00000302528 C5orf30Q96GV9 206 aa8.86□□□□□ -0.99
CLIP1-201ENST00000302528 SPAG17Q6Q759 2223 aa8.86□□□□□ -0.99
CLIP1-201ENST00000302528 EGR1P18146 543 aa8.86□□□□□ -0.99
CLIP1-201ENST00000302528 GPX4P36969 197 aaPredicted RBP8.86□□□□□ -0.99
CLIP1-201ENST00000302528 NANOS3P60323 173 aaKnown RBP8.86□□□□□ -0.99
CLIP1-201ENST00000302528 SRSF4Q08170 494 aaKnown RBP8.86□□□□□ -0.99
CLIP1-201ENST00000302528 FAM71F2Q6NXP2 309 aa8.86□□□□□ -0.99
CLIP1-201ENST00000302528 ZPLD1Q8TCW7 415 aa8.86□□□□□ -0.99
CLIP1-201ENST00000302528 WNT2BQ93097 391 aa8.86□□□□□ -0.99
CLIP1-201ENST00000302528 PEMTQ9UBM1 199 aa8.86□□□□□ -0.99
CLIP1-201ENST00000302528 NMBP08949 121 aa8.86□□□□□ -0.99
CLIP1-201ENST00000302528 NBEAP1P0C6P0 100 aa8.86□□□□□ -0.99
CLIP1-201ENST00000302528 FSTP19883 344 aa8.86□□□□□ -0.99
CLIP1-201ENST00000302528 ZNF721Q8TF20 911 aa8.86□□□□□ -0.99
CLIP1-201ENST00000302528 MRPL20Q9BYC9 149 aaKnown RBP8.86□□□□□ -0.99
CLIP1-201ENST00000302528 MS4A6AQ9H2W1 248 aa8.86□□□□□ -0.99
CLIP1-201ENST00000302528 HIST1H4AP62805 103 aaKnown RBP8.86□□□□□ -0.99
CLIP1-201ENST00000302528 STHQ8IWL8 128 aa8.86□□□□□ -0.99
CLIP1-201ENST00000302528 APCDD1LQ8NCL9 501 aa8.86□□□□□ -0.99
CLIP1-201ENST00000302528 SMIM8Q96KF7 97 aa8.86□□□□□ -0.99
CLIP1-201ENST00000302528 TRAV2A0A0B4J234 112 aa8.86□□□□□ -0.99
CLIP1-201ENST00000302528 SLC17A3O00476 420 aa8.86□□□□□ -0.99
CLIP1-201ENST00000302528 HBDP02042 147 aa8.86□□□□□ -0.99
CLIP1-201ENST00000302528 RPL32P62910 135 aaKnown RBP8.86□□□□□ -0.99
CLIP1-201ENST00000302528 FOXA2Q9Y261 457 aaPredicted RBP8.86□□□□□ -0.99
CLIP1-201ENST00000302528 LEPP41159 167 aa8.85□□□□□ -0.99
CLIP1-201ENST00000302528 ZNF79Q15937 498 aa8.85□□□□□ -0.99
CLIP1-201ENST00000302528 TBR1Q16650 682 aa8.85□□□□□ -0.99
CLIP1-201ENST00000302528 FAM209AQ5JX71 171 aa8.85□□□□□ -0.99
CLIP1-201ENST00000302528 ZNF660Q6AZW8 331 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-201ENST00000302528 FER1L6-AS1Q8NA97 138 aa8.85□□□□□ -0.99
CLIP1-201ENST00000302528 ZNF48Q96MX3 618 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-201ENST00000302528 JPT2Q9H910 190 aa8.85□□□□□ -0.99
CLIP1-201ENST00000302528 SCN9AQ15858 1988 aa8.85□□□□□ -0.99
CLIP1-201ENST00000302528 SHROOM3Q8TF72 1996 aa8.85□□□□□ -0.99
CLIP1-201ENST00000302528 IL6RP08887 468 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-201ENST00000302528 IL11P20809 199 aa8.85□□□□□ -0.99
CLIP1-201ENST00000302528 GFI1BQ5VTD9 330 aa8.85□□□□□ -0.99
CLIP1-201ENST00000302528 DTX2Q86UW9 622 aa8.85□□□□□ -0.99
CLIP1-201ENST00000302528 NPCDR1Q9BY65 106 aa8.85□□□□□ -0.99
CLIP1-201ENST00000302528 NHP2Q9NX24 153 aaKnown RBP8.85□□□□□ -0.99
CLIP1-201ENST00000302528 YBX2Q9Y2T7 364 aaKnown RBP8.85□□□□□ -0.99
CLIP1-201ENST00000302528 SPINT1O43278 529 aa8.85□□□□□ -0.99
CLIP1-201ENST00000302528 NAPSAO96009 420 aa8.85□□□□□ -0.99
CLIP1-201ENST00000302528 VKORC1Q9BQB6 163 aa8.85□□□□□ -0.99
CLIP1-201ENST00000302528 GGACTQ9BVM4 153 aa8.85□□□□□ -0.99
CLIP1-201ENST00000302528 ST20Q9HBF5 79 aa8.85□□□□□ -0.99
CLIP1-201ENST00000302528 TRGV4A0A0C4DH28 118 aa8.85□□□□□ -0.99
CLIP1-201ENST00000302528 PGPEP1LA6NFU8 196 aa8.85□□□□□ -0.99
CLIP1-201ENST00000302528 F8WEM9 126 aa8.85□□□□□ -0.99
CLIP1-201ENST00000302528 PLNP26678 52 aa8.85□□□□□ -0.99
CLIP1-201ENST00000302528 PTGDSP41222 190 aa8.85□□□□□ -0.99
CLIP1-201ENST00000302528 ORMDL3Q8N138 153 aa8.85□□□□□ -0.99
CLIP1-201ENST00000302528 JMJD8Q96S16 334 aa8.85□□□□□ -0.99
CLIP1-201ENST00000302528 NRTNQ99748 197 aa8.85□□□□□ -0.99
CLIP1-201ENST00000302528 ATP5IP56385 69 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-201ENST00000302528 ZNF415Q09FC8 603 aa8.85□□□□□ -0.99
CLIP1-201ENST00000302528 KLF14Q8TD94 323 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-201ENST00000302528 A0A0U1RRA0 63 aa8.84□□□□□ -0.99
CLIP1-201ENST00000302528 A0A1B0GW15 77 aa8.84□□□□□ -0.99
CLIP1-201ENST00000302528 ATXN8Q156A1 80 aa8.84□□□□□ -0.99
CLIP1-201ENST00000302528 STPG1Q5TH74 334 aa8.84□□□□□ -0.99
CLIP1-201ENST00000302528 PPP1R27Q86WC6 154 aa8.84□□□□□ -0.99
CLIP1-201ENST00000302528 KCNK17Q96T54 332 aa8.84□□□□□ -0.99
CLIP1-201ENST00000302528 SSC5DA1L4H1 1573 aa8.84□□□□□ -0.99
CLIP1-201ENST00000302528 CD7P09564 240 aa8.84□□□□□ -0.99
CLIP1-201ENST00000302528 HOXB1P14653 301 aaPredicted RBP8.84□□□□□ -0.99
CLIP1-201ENST00000302528 LINC00158P58513 81 aa8.84□□□□□ -0.99
CLIP1-201ENST00000302528 RPP21Q9H633 154 aaKnown RBP8.84□□□□□ -0.99
CLIP1-201ENST00000302528 RPRMQ9NS64 109 aa8.84□□□□□ -0.99
CLIP1-201ENST00000302528 IL36BQ9NZH7 164 aa8.84□□□□□ -0.99
CLIP1-201ENST00000302528 ZNF257Q9Y2Q1 563 aa8.84□□□□□ -0.99
CLIP1-201ENST00000302528 NDUFS8O00217 210 aa8.84□□□□□ -0.99
CLIP1-201ENST00000302528 VENTXO95231 258 aa8.84□□□□□ -0.99
CLIP1-201ENST00000302528 ZNF585BQ52M93 769 aa8.84□□□□□ -0.99
CLIP1-201ENST00000302528 CLEC19AQ6UXS0 136 aa8.84□□□□□ -0.99
CLIP1-201ENST00000302528 FMC1Q96HJ9 113 aa8.84□□□□□ -0.99
CLIP1-201ENST00000302528 C21orf62Q9NYP8 219 aa8.84□□□□□ -0.99
CLIP1-201ENST00000302528 DTX4Q9Y2E6 619 aa8.84□□□□□ -0.99
CLIP1-201ENST00000302528 B9A039 149 aa8.83□□□□□ -1
CLIP1-201ENST00000302528 KLF4O43474 513 aa8.83□□□□□ -1
CLIP1-201ENST00000302528 TOMM40O96008 361 aa8.83□□□□□ -1
CLIP1-201ENST00000302528 SNAI3Q3KNW1 292 aa8.83□□□□□ -1
CLIP1-201ENST00000302528 CIARTQ8N365 385 aaPredicted RBP8.83□□□□□ -1
CLIP1-201ENST00000302528 SCARF2Q96GP6 870 aaPredicted RBP8.83□□□□□ -1
CLIP1-201ENST00000302528 DUSP15Q9H1R2 295 aaPredicted RBP8.83□□□□□ -1
CLIP1-201ENST00000302528 G6PC2Q9NQR9 355 aa8.83□□□□□ -1
CLIP1-201ENST00000302528 SBF2Q86WG5 1849 aa8.83□□□□□ -1
CLIP1-201ENST00000302528 Q6AWC8 147 aa8.83□□□□□ -1
CLIP1-201ENST00000302528 LILRA6Q6PI73 481 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms