RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 MMP23AO75900 390 aa18.1■□□□□ 0.49
TPM4-201ENST00000300933 HTD2P86397 168 aa18.1■□□□□ 0.49
TPM4-201ENST00000300933 ADIPOQQ15848 244 aa18.1■□□□□ 0.49
TPM4-201ENST00000300933 SLC39A9Q9NUM3 307 aa18.1■□□□□ 0.49
TPM4-201ENST00000300933 MARCH11A6NNE9 402 aa18.09■□□□□ 0.49
TPM4-201ENST00000300933 ADH4P08319 380 aa18.09■□□□□ 0.49
TPM4-201ENST00000300933 ZNF25P17030 456 aaPredicted RBP18.09■□□□□ 0.49
TPM4-201ENST00000300933 GATAD1Q8WUU5 269 aa18.09■□□□□ 0.49
TPM4-201ENST00000300933 TMEM18Q96B42 140 aa18.09■□□□□ 0.49
TPM4-201ENST00000300933 SSUH2Q9Y2M2 353 aa18.09■□□□□ 0.49
TPM4-201ENST00000300933 DSCAML1Q8TD84 2053 aa18.09■□□□□ 0.49
TPM4-201ENST00000300933 UBE2L5PA0A1B0GUS4 154 aa18.09■□□□□ 0.49
TPM4-201ENST00000300933 IFNA1P01562 189 aa18.09■□□□□ 0.49
TPM4-201ENST00000300933 DUTP33316 252 aaKnown RBP18.09■□□□□ 0.49
TPM4-201ENST00000300933 GNG10P50151 68 aa18.09■□□□□ 0.49
TPM4-201ENST00000300933 MEF2BQ02080 365 aaPredicted RBP18.09■□□□□ 0.49
TPM4-201ENST00000300933 C17orf58Q2M2W7 97 aa18.09■□□□□ 0.49
TPM4-201ENST00000300933 CYP2G1PQ6ZSU1 146 aa18.09■□□□□ 0.49
TPM4-201ENST00000300933 PPP1R35Q8TAP8 253 aa18.09■□□□□ 0.49
TPM4-201ENST00000300933 PYGO2Q9BRQ0 406 aa18.09■□□□□ 0.49
TPM4-201ENST00000300933 IL19Q9UHD0 177 aa18.09■□□□□ 0.49
TPM4-201ENST00000300933 OR9G9P0C7N8 305 aa18.08■□□□□ 0.49
TPM4-201ENST00000300933 RBM14Q96PK6 669 aaKnown RBP18.08■□□□□ 0.49
TPM4-201ENST00000300933 TMPRSS2O15393 492 aa18.08■□□□□ 0.48
TPM4-201ENST00000300933 P0C879 139 aa18.08■□□□□ 0.48
TPM4-201ENST00000300933 COA6Q5JTJ3 125 aaKnown RBP18.08■□□□□ 0.48
TPM4-201ENST00000300933 TMEM170AQ8WVE7 144 aa18.08■□□□□ 0.48
TPM4-201ENST00000300933 QTRT1Q9BXR0 403 aaKnown RBP18.08■□□□□ 0.48
TPM4-201ENST00000300933 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.08■□□□□ 0.48
TPM4-201ENST00000300933 RAXQ9Y2V3 346 aa18.08■□□□□ 0.48
TPM4-201ENST00000300933 TNCP24821 2201 aa18.08■□□□□ 0.48
TPM4-201ENST00000300933 A0A1B0GUS0 222 aa18.07■□□□□ 0.48
TPM4-201ENST00000300933 IGKV1D-33P01593 117 aa18.07■□□□□ 0.48
TPM4-201ENST00000300933 IGKV1-33P01594 117 aa18.07■□□□□ 0.48
TPM4-201ENST00000300933 TMEM41BQ5BJD5 291 aa18.07■□□□□ 0.48
TPM4-201ENST00000300933 Q8TCH9 128 aa18.07■□□□□ 0.48
TPM4-201ENST00000300933 PARLQ9H300 379 aa18.07■□□□□ 0.48
TPM4-201ENST00000300933 SLC25A22Q9H936 323 aa18.07■□□□□ 0.48
TPM4-201ENST00000300933 HSPB7Q9UBY9 170 aa18.07■□□□□ 0.48
TPM4-201ENST00000300933 KBTBD11O94819 623 aa18.07■□□□□ 0.48
TPM4-201ENST00000300933 IQCJQ1A5X6 159 aa18.07■□□□□ 0.48
TPM4-201ENST00000300933 RPP25LQ8N5L8 163 aaKnown RBP18.07■□□□□ 0.48
TPM4-201ENST00000300933 R3HDM4Q96D70 268 aa18.07■□□□□ 0.48
TPM4-201ENST00000300933 ACY3Q96HD9 319 aa18.07■□□□□ 0.48
TPM4-201ENST00000300933 GAFA1Q96PS6 74 aa18.07■□□□□ 0.48
TPM4-201ENST00000300933 IFI27L2Q9H2X8 130 aa18.07■□□□□ 0.48
TPM4-201ENST00000300933 SPTBN1Q01082 2364 aaKnown RBP18.07■□□□□ 0.48
TPM4-201ENST00000300933 TRAV3A0A0B4J244 114 aa18.06■□□□□ 0.48
TPM4-201ENST00000300933 TRGV8A0A0C4DH27 118 aa18.06■□□□□ 0.48
TPM4-201ENST00000300933 FAM3BP58499 235 aaPredicted RBP18.06■□□□□ 0.48
TPM4-201ENST00000300933 SLC38A11Q08AI6 406 aa18.06■□□□□ 0.48
TPM4-201ENST00000300933 MSMO1Q15800 293 aa18.06■□□□□ 0.48
TPM4-201ENST00000300933 STUMQ69YW2 141 aa18.06■□□□□ 0.48
TPM4-201ENST00000300933 TCF23Q7RTU1 214 aa18.06■□□□□ 0.48
TPM4-201ENST00000300933 OR4F5Q8NH21 305 aa18.06■□□□□ 0.48
TPM4-201ENST00000300933 OR4F4Q96R69 305 aa18.06■□□□□ 0.48
TPM4-201ENST00000300933 HSD17B10Q99714 261 aaKnown RBP18.06■□□□□ 0.48
TPM4-201ENST00000300933 LRRC75BQ2VPJ9 315 aa18.06■□□□□ 0.48
TPM4-201ENST00000300933 C3orf36Q3SXR2 165 aa18.06■□□□□ 0.48
TPM4-201ENST00000300933 CT45A1Q5HYN5 189 aa18.06■□□□□ 0.48
TPM4-201ENST00000300933 CT45A3Q8NHU0 189 aa18.06■□□□□ 0.48
TPM4-201ENST00000300933 DTD1Q8TEA8 209 aa18.06■□□□□ 0.48
TPM4-201ENST00000300933 AURKAIP1Q9NWT8 199 aaPredicted RBP18.06■□□□□ 0.48
TPM4-201ENST00000300933 M0R143 59 aa18.06■□□□□ 0.48
TPM4-201ENST00000300933 HRASP01112 189 aa18.06■□□□□ 0.48
TPM4-201ENST00000300933 TNFSF4P23510 183 aa18.06■□□□□ 0.48
TPM4-201ENST00000300933 GATA4P43694 442 aa18.06■□□□□ 0.48
TPM4-201ENST00000300933 CCL17Q92583 94 aa18.06■□□□□ 0.48
TPM4-201ENST00000300933 RPL29P47914 159 aaKnown RBP18.05■□□□□ 0.48
TPM4-201ENST00000300933 OR2T10Q8NGZ9 312 aa18.05■□□□□ 0.48
TPM4-201ENST00000300933 PSMG3Q9BT73 122 aaPredicted RBP18.05■□□□□ 0.48
TPM4-201ENST00000300933 JPT1Q9UK76 154 aa18.05■□□□□ 0.48
TPM4-201ENST00000300933 ANKHD1Q8IWZ3 2542 aaKnown RBP18.05■□□□□ 0.48
TPM4-201ENST00000300933 PIGBOS1A0A0B4J2F0 54 aa18.05■□□□□ 0.48
TPM4-201ENST00000300933 PDLIM4P50479 330 aa18.05■□□□□ 0.48
TPM4-201ENST00000300933 HBG1P69891 147 aa18.05■□□□□ 0.48
TPM4-201ENST00000300933 HBG2P69892 147 aa18.05■□□□□ 0.48
TPM4-201ENST00000300933 ACTL10Q5JWF8 245 aa18.05■□□□□ 0.48
TPM4-201ENST00000300933 WDR61Q9GZS3 305 aaKnown RBP18.05■□□□□ 0.48
TPM4-201ENST00000300933 FKBP11Q9NYL4 201 aa18.05■□□□□ 0.48
TPM4-201ENST00000300933 ASH1LQ9NR48 2969 aaKnown RBP18.04■□□□□ 0.48
TPM4-201ENST00000300933 YPEL1O60688 119 aa18.04■□□□□ 0.48
TPM4-201ENST00000300933 DEFA4P12838 97 aa18.04■□□□□ 0.48
TPM4-201ENST00000300933 CHRNA7P36544 502 aa18.04■□□□□ 0.48
TPM4-201ENST00000300933 SERF2P84101 59 aa18.04■□□□□ 0.48
TPM4-201ENST00000300933 LYG1Q8N1E2 194 aa18.04■□□□□ 0.48
TPM4-201ENST00000300933 YPEL2Q96QA6 119 aa18.04■□□□□ 0.48
TPM4-201ENST00000300933 OR6C3Q9NZP0 311 aa18.04■□□□□ 0.48
TPM4-201ENST00000300933 TANC2Q9HCD6 1990 aa18.04■□□□□ 0.48
TPM4-201ENST00000300933 TET2Q6N021 2002 aaPredicted RBP18.04■□□□□ 0.48
TPM4-201ENST00000300933 A6NNC1 897 aa18.04■□□□□ 0.48
TPM4-201ENST00000300933 CGB3P0DN86 165 aa18.04■□□□□ 0.48
TPM4-201ENST00000300933 CGB7P0DN87 165 aa18.04■□□□□ 0.48
TPM4-201ENST00000300933 IRF2P14316 349 aa18.04■□□□□ 0.48
TPM4-201ENST00000300933 CD33P20138 364 aa18.04■□□□□ 0.48
TPM4-201ENST00000300933 ERVFC1-1P60608 527 aa18.04■□□□□ 0.48
TPM4-201ENST00000300933 PRAMEF5Q5TYX0 476 aa18.04■□□□□ 0.48
TPM4-201ENST00000300933 TRAT1Q6PIZ9 186 aa18.04■□□□□ 0.48
TPM4-201ENST00000300933 ZNF835Q9Y2P0 537 aa18.04■□□□□ 0.48
TPM4-201ENST00000300933 GFRA3O60609 400 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms