RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 NPFFO15130 113 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 PEBP1P30086 187 aaKnown RBP12.67□□□□□ -0.38
SCN3B-201ENST00000299333 ICAM4Q14773 271 aa12.67□□□□□ -0.38
SCN3B-201ENST00000299333 SFXN3Q9BWM7 321 aa12.67□□□□□ -0.38
SCN3B-201ENST00000299333 TMEM106BQ9NUM4 274 aa12.67□□□□□ -0.38
SCN3B-201ENST00000299333 COL18A1P39060 1754 aa12.67□□□□□ -0.38
SCN3B-201ENST00000299333 M0R381 172 aa12.67□□□□□ -0.38
SCN3B-201ENST00000299333 FSCN3Q9NQT6 498 aa12.67□□□□□ -0.38
SCN3B-201ENST00000299333 C9JCJ5 164 aa12.67□□□□□ -0.38
SCN3B-201ENST00000299333 HIST1H2BKO60814 126 aa12.67□□□□□ -0.38
SCN3B-201ENST00000299333 HIST1H2BJP06899 126 aa12.67□□□□□ -0.38
SCN3B-201ENST00000299333 HIST1H2BOP23527 126 aa12.67□□□□□ -0.38
SCN3B-201ENST00000299333 HIST1H2BBP33778 126 aa12.67□□□□□ -0.38
SCN3B-201ENST00000299333 HIST1H2BDP58876 126 aa12.67□□□□□ -0.38
SCN3B-201ENST00000299333 HIST1H2BCP62807 126 aa12.67□□□□□ -0.38
SCN3B-201ENST00000299333 HIST2H2BEQ16778 126 aa12.67□□□□□ -0.38
SCN3B-201ENST00000299333 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.67□□□□□ -0.38
SCN3B-201ENST00000299333 HIST1H2BHQ93079 126 aa12.67□□□□□ -0.38
SCN3B-201ENST00000299333 HIST1H2BNQ99877 126 aa12.67□□□□□ -0.38
SCN3B-201ENST00000299333 HIST1H2BMQ99879 126 aa12.67□□□□□ -0.38
SCN3B-201ENST00000299333 TRBV7-9A0A0J9YWB2 115 aa12.67□□□□□ -0.38
SCN3B-201ENST00000299333 RNF222A6NCQ9 220 aa12.67□□□□□ -0.38
SCN3B-201ENST00000299333 FOXL2P58012 376 aa12.67□□□□□ -0.38
SCN3B-201ENST00000299333 WDR82Q6UXN9 313 aa12.67□□□□□ -0.38
SCN3B-201ENST00000299333 LOXL4Q96JB6 756 aa12.67□□□□□ -0.38
SCN3B-201ENST00000299333 KCNK17Q96T54 332 aa12.67□□□□□ -0.38
SCN3B-201ENST00000299333 C2orf88Q9BSF0 95 aa12.67□□□□□ -0.38
SCN3B-201ENST00000299333 TUBA4BQ9H853 241 aa12.67□□□□□ -0.38
SCN3B-201ENST00000299333 SLX4Q8IY92 1834 aa12.67□□□□□ -0.38
SCN3B-201ENST00000299333 ABCA3Q99758 1704 aa12.67□□□□□ -0.38
SCN3B-201ENST00000299333 A0A1B0GUT8 65 aa12.66□□□□□ -0.38
SCN3B-201ENST00000299333 HOXA3O43365 443 aaPredicted RBP12.66□□□□□ -0.38
SCN3B-201ENST00000299333 CCL4P13236 92 aa12.66□□□□□ -0.38
SCN3B-201ENST00000299333 GATAD1Q8WUU5 269 aa12.66□□□□□ -0.38
SCN3B-201ENST00000299333 IGHV3-35A0A0C4DH35 117 aa12.66□□□□□ -0.38
SCN3B-201ENST00000299333 PEX7O00628 323 aa12.66□□□□□ -0.38
SCN3B-201ENST00000299333 DRAM1Q8N682 238 aa12.66□□□□□ -0.38
SCN3B-201ENST00000299333 LRTM2Q8N967 370 aa12.66□□□□□ -0.38
SCN3B-201ENST00000299333 MAFAQ8NHW3 353 aaPredicted RBP12.66□□□□□ -0.38
SCN3B-201ENST00000299333 IDI2-AS1Q9NZ38 188 aa12.66□□□□□ -0.38
SCN3B-201ENST00000299333 LHFPL6Q9Y693 200 aa12.66□□□□□ -0.38
SCN3B-201ENST00000299333 DLEC1Q9Y238 1755 aa12.66□□□□□ -0.38
SCN3B-201ENST00000299333 TRAV30A0A087WSZ9 112 aa12.66□□□□□ -0.38
SCN3B-201ENST00000299333 TRAV9-2A0A087WT02 112 aa12.66□□□□□ -0.38
SCN3B-201ENST00000299333 IGHV1OR15-9A0A0B4J2B8 117 aa12.66□□□□□ -0.38
SCN3B-201ENST00000299333 RPL23P62829 140 aaKnown RBP12.66□□□□□ -0.38
SCN3B-201ENST00000299333 SPANXA1Q9NS26 97 aa12.66□□□□□ -0.38
SCN3B-201ENST00000299333 ODAMA1E959 279 aa12.66□□□□□ -0.38
SCN3B-201ENST00000299333 OR4X2Q8NGF9 303 aa12.66□□□□□ -0.38
SCN3B-201ENST00000299333 PAPPAQ13219 1627 aa12.66□□□□□ -0.38
SCN3B-201ENST00000299333 IZUMO1RA6ND01 250 aa12.65□□□□□ -0.38
SCN3B-201ENST00000299333 PNKDQ8N490 385 aa12.65□□□□□ -0.38
SCN3B-201ENST00000299333 RPP21Q9H633 154 aaKnown RBP12.65□□□□□ -0.38
SCN3B-201ENST00000299333 SHISA3A0PJX4 238 aa12.65□□□□□ -0.38
SCN3B-201ENST00000299333 FOXS1O43638 330 aa12.65□□□□□ -0.38
SCN3B-201ENST00000299333 SYNGR3O43761 229 aa12.65□□□□□ -0.38
SCN3B-201ENST00000299333 ADRA2AP08913 450 aa12.65□□□□□ -0.38
SCN3B-201ENST00000299333 FAM159AQ6UWV7 190 aa12.65□□□□□ -0.38
SCN3B-201ENST00000299333 ITLN1Q8WWA0 313 aa12.65□□□□□ -0.38
SCN3B-201ENST00000299333 GP6Q9HCN6 339 aa12.65□□□□□ -0.38
SCN3B-201ENST00000299333 IGKV3-20P01619 116 aa12.65□□□□□ -0.38
SCN3B-201ENST00000299333 NGFRP08138 427 aa12.65□□□□□ -0.38
SCN3B-201ENST00000299333 FAM106CPP0CH98 169 aa12.65□□□□□ -0.38
SCN3B-201ENST00000299333 ZNF146Q15072 292 aa12.65□□□□□ -0.38
SCN3B-201ENST00000299333 PRSS53Q2L4Q9 553 aa12.65□□□□□ -0.38
SCN3B-201ENST00000299333 PCSK4Q6UW60 755 aa12.65□□□□□ -0.38
SCN3B-201ENST00000299333 GTF3AQ92664 365 aaKnown RBP12.65□□□□□ -0.38
SCN3B-201ENST00000299333 TRAV14DV4A0A0A6YYC5 116 aa12.65□□□□□ -0.38
SCN3B-201ENST00000299333 GAGE12BA1L429 117 aa12.65□□□□□ -0.38
SCN3B-201ENST00000299333 TMEM14DPA8MWL7 114 aa12.65□□□□□ -0.38
SCN3B-201ENST00000299333 WISP3O95389 354 aaPredicted RBP12.65□□□□□ -0.38
SCN3B-201ENST00000299333 LEPP41159 167 aa12.65□□□□□ -0.38
SCN3B-201ENST00000299333 SLC25A47Q6Q0C1 308 aa12.65□□□□□ -0.38
SCN3B-201ENST00000299333 NPIPB4C9JG80 1138 aa12.64□□□□□ -0.39
SCN3B-201ENST00000299333 ATP6V0BQ99437 205 aa12.64□□□□□ -0.39
SCN3B-201ENST00000299333 SS18L2Q9UHA2 77 aa12.64□□□□□ -0.39
SCN3B-201ENST00000299333 IGHV3OR16-13A0A075B7E8 117 aa12.64□□□□□ -0.39
SCN3B-201ENST00000299333 IGHV3-74A0A0B4J1X5 117 aa12.64□□□□□ -0.39
SCN3B-201ENST00000299333 PRSS47A8MTI9 375 aa12.64□□□□□ -0.39
SCN3B-201ENST00000299333 ZNF585BQ52M93 769 aa12.64□□□□□ -0.39
SCN3B-201ENST00000299333 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.64□□□□□ -0.39
SCN3B-201ENST00000299333 S100A7L2Q5SY68 101 aa12.64□□□□□ -0.39
SCN3B-201ENST00000299333 HIST1H2BLQ99880 126 aa12.64□□□□□ -0.39
SCN3B-201ENST00000299333 HIGD1CA8MV81 97 aa12.64□□□□□ -0.39
SCN3B-201ENST00000299333 NBEAP1P0C6P0 100 aa12.64□□□□□ -0.39
SCN3B-201ENST00000299333 RAX2Q96IS3 184 aa12.64□□□□□ -0.39
SCN3B-201ENST00000299333 IGFBP2P18065 325 aa12.63□□□□□ -0.39
SCN3B-201ENST00000299333 ASPHD2Q6ICH7 369 aa12.63□□□□□ -0.39
SCN3B-201ENST00000299333 RNASE7Q9H1E1 156 aaKnown RBP12.63□□□□□ -0.39
SCN3B-201ENST00000299333 LAMB2P55268 1798 aa12.63□□□□□ -0.39
SCN3B-201ENST00000299333 A0A0G2JMM0 328 aa12.63□□□□□ -0.39
SCN3B-201ENST00000299333 A0A1W2PPB8 328 aa12.63□□□□□ -0.39
SCN3B-201ENST00000299333 KIR3DP1A8MWS1 328 aa12.63□□□□□ -0.39
SCN3B-201ENST00000299333 THY1P04216 161 aa12.63□□□□□ -0.39
SCN3B-201ENST00000299333 SEC11AP67812 179 aa12.63□□□□□ -0.39
SCN3B-201ENST00000299333 TRAV9-1A0A075B6T8 112 aa12.63□□□□□ -0.39
SCN3B-201ENST00000299333 A0A0G2JLM5 398 aa12.63□□□□□ -0.39
SCN3B-201ENST00000299333 C16orf97H3BN30 126 aa12.63□□□□□ -0.39
SCN3B-201ENST00000299333 PMS2CLQ68D20 193 aa12.63□□□□□ -0.39
SCN3B-201ENST00000299333 TTTY12Q9BZ98 90 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms