RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 CACNG5Q9UF02 275 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 PRELID3BQ9Y3B1 194 aa5.13□□□□□ -1.59
DEPDC4-201ENST00000299185 A0A0A6YYJ9 748 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 IGHV7-81A0A0B4J1V7 117 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 HMX3A6NHT5 357 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 CGB1A6NKQ9 187 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 MARCH11A6NNE9 402 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 FAM25EA8MYX2 175 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 E7EUB6 86 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 GOSR2O14653 212 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 ATP6V0E1O15342 81 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 TCF21O43680 179 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 SLC22A5O76082 557 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 KBTBD11O94819 623 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 NDUFA3O95167 84 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 REG1AP05451 166 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 SERPINE2P07093 398 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 P0C879 139 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 ECI1P42126 302 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 ARHGDIBP52566 201 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 SLURP1P55000 103 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 BPIFB3P59826 476 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 UBE2KP61086 200 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 ERVK-16P61578 105 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 FCN2Q15485 313 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 ECSCRQ19T08 205 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 GGNBP1Q5YKI7 109 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 LPCAT3Q6P1A2 487 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 THNSL2Q86YJ6 484 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 PUSL1Q8N0Z8 303 aaKnown RBP5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 FAM71E2Q8N5Q1 922 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 TEX29Q8N6K0 151 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 OR5R1Q8NH85 324 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 ZNF431Q8TF32 576 aaPredicted RBP5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 FAM216AQ8WUB2 273 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 GALNT14Q96FL9 552 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 MARVELD1Q9BSK0 173 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 HINT2Q9BX68 163 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 RANBP3Q9H6Z4 567 aaPredicted RBP5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 C1RLQ9NZP8 487 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 COMMD9Q9P000 198 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 WSB1Q9Y6I7 421 aa5.12□□□□□ -1.59
DEPDC4-201ENST00000299185 C7orf66A4D0T2 115 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 G3V318 75 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 UPK2O00526 184 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 RBFOX2O43251 390 aaKnown RBP eCLIP5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 SCGB1D2O95969 90 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 HPRT1P00492 218 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 PRH1P02810 166 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 FAM106CPP0CH98 169 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 RRASP10301 218 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 AREGP15514 252 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 NQO2P16083 231 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 MDKP21741 143 aaPredicted RBP5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 S100GP29377 79 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 RAG2P55895 527 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 SRSF4Q08170 494 aaKnown RBP5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 PRSS8Q16651 343 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 VMA21Q3ZAQ7 101 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 TMEM128Q5BJH2 165 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 NMSQ5H8A3 153 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 ASPHD1Q5U4P2 390 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 ZNF695Q8IW36 515 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 LGI3Q8N145 548 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 C12orf45Q8N5I9 185 aaPredicted RBP5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 C11orf44Q8N8P7 122 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 NPBQ8NG41 125 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 OR10W1Q8NGF6 305 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 OR4C13Q8NGP0 309 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 OSR1Q8TAX0 266 aaPredicted RBP5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 RBPMSQ93062 196 aaKnown RBP5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 OR10C1Q96KK4 312 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 SCGB3A2Q96PL1 93 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 FYTTD1Q96QD9 318 aaKnown RBP5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 TSNAXQ99598 290 aaKnown RBP5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 RASL11BQ9BPW5 248 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 MAGT1Q9H0U3 335 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 OR51J1Q9H342 316 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 PLEKHA2Q9HB19 425 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 KIAA1456Q9P272 454 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 MGAT4CQ9UBM8 478 aa5.11□□□□□ -1.59
DEPDC4-201ENST00000299185 C13orf42A0A1B0GVH6 325 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 ANKRD34BA5PLL1 514 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 C15orf61A6NNL5 157 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 TEX22C9J3V5 150 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 SMLR1H3BR10 107 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 ST8SIA3O43173 380 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 SSNA1O43805 119 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 RBMXL2O75526 392 aaKnown RBP5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 OR2A4O95047 310 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 SPDEFO95238 335 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 CDS2O95674 445 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 IL5P05113 134 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 IL6RP08887 468 aaPredicted RBP5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 IAPPP10997 89 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 EGR2P11161 476 aaPredicted RBP5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 HLA-GP17693 338 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 CXCL3P19876 107 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 MC5RP33032 325 aa5.1□□□□□ -1.59
DEPDC4-201ENST00000299185 MECP2P51608 486 aaKnown RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms