RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 PROCRQ9UNN8 238 aa20.1■□□□□ 0.81
SPTSSA-201ENST00000298130 IL6RP08887 468 aaPredicted RBP20.09■□□□□ 0.81
SPTSSA-201ENST00000298130 LYG1Q8N1E2 194 aa20.09■□□□□ 0.81
SPTSSA-201ENST00000298130 MISP3Q96FF7 219 aa20.09■□□□□ 0.81
SPTSSA-201ENST00000298130 KCNIP2Q9NS61 270 aa20.09■□□□□ 0.81
SPTSSA-201ENST00000298130 SAA2-SAA4A0A096LPE2 208 aa20.09■□□□□ 0.81
SPTSSA-201ENST00000298130 PRR33A8MZF0 331 aa20.09■□□□□ 0.81
SPTSSA-201ENST00000298130 IGLV1-44P01699 117 aa20.09■□□□□ 0.81
SPTSSA-201ENST00000298130 SAA2P0DJI9 122 aaPredicted RBP20.09■□□□□ 0.81
SPTSSA-201ENST00000298130 OPRK1P41145 380 aa20.09■□□□□ 0.81
SPTSSA-201ENST00000298130 SSX2Q16385 188 aa20.09■□□□□ 0.81
SPTSSA-201ENST00000298130 JPT1Q9UK76 154 aa20.09■□□□□ 0.81
SPTSSA-201ENST00000298130 ADGRG4Q8IZF6 3080 aa20.09■□□□□ 0.81
SPTSSA-201ENST00000298130 ZNF891A8MT65 544 aaPredicted RBP20.08■□□□□ 0.81
SPTSSA-201ENST00000298130 MGST3O14880 152 aa20.08■□□□□ 0.81
SPTSSA-201ENST00000298130 STAG3L2P0CL84 134 aa20.08■□□□□ 0.81
SPTSSA-201ENST00000298130 STAG3L3P0CL85 134 aa20.08■□□□□ 0.81
SPTSSA-201ENST00000298130 RPL15P61313 204 aaKnown RBP20.08■□□□□ 0.81
SPTSSA-201ENST00000298130 USF2Q15853 346 aaPredicted RBP20.08■□□□□ 0.81
SPTSSA-201ENST00000298130 DEFB109BQ30KR1 87 aa20.08■□□□□ 0.81
SPTSSA-201ENST00000298130 SEM1Q6ZVN7 128 aa20.08■□□□□ 0.81
SPTSSA-201ENST00000298130 STPG3Q8N7X2 389 aa20.08■□□□□ 0.81
SPTSSA-201ENST00000298130 MDFIC2A0A1B0GVS7 189 aa20.08■□□□□ 0.8
SPTSSA-201ENST00000298130 IGFBP2P18065 325 aa20.08■□□□□ 0.8
SPTSSA-201ENST00000298130 COA6Q5JTJ3 125 aaKnown RBP20.08■□□□□ 0.8
SPTSSA-201ENST00000298130 MBNL2Q5VZF2 373 aaKnown RBP20.08■□□□□ 0.8
SPTSSA-201ENST00000298130 OR4P4Q8NGL7 312 aa20.08■□□□□ 0.8
SPTSSA-201ENST00000298130 ACY3Q96HD9 319 aa20.08■□□□□ 0.8
SPTSSA-201ENST00000298130 DCAF16Q9NXF7 216 aa20.08■□□□□ 0.8
SPTSSA-201ENST00000298130 SPINK4O60575 86 aa20.07■□□□□ 0.8
SPTSSA-201ENST00000298130 CBLN1P23435 193 aa20.07■□□□□ 0.8
SPTSSA-201ENST00000298130 ASPHD1Q5U4P2 390 aa20.07■□□□□ 0.8
SPTSSA-201ENST00000298130 OR4A47Q6IF82 309 aa20.07■□□□□ 0.8
SPTSSA-201ENST00000298130 RNASEH2CQ8TDP1 164 aaKnown RBP20.07■□□□□ 0.8
SPTSSA-201ENST00000298130 YPEL1O60688 119 aa20.07■□□□□ 0.8
SPTSSA-201ENST00000298130 MMP23AO75900 390 aa20.07■□□□□ 0.8
SPTSSA-201ENST00000298130 CA2P00918 260 aa20.07■□□□□ 0.8
SPTSSA-201ENST00000298130 RPL31P62899 125 aaKnown RBP20.07■□□□□ 0.8
SPTSSA-201ENST00000298130 OR5I1Q13606 314 aa20.07■□□□□ 0.8
SPTSSA-201ENST00000298130 MLANAQ16655 118 aa20.07■□□□□ 0.8
SPTSSA-201ENST00000298130 YPEL2Q96QA6 119 aa20.07■□□□□ 0.8
SPTSSA-201ENST00000298130 PLSCR4Q9NRQ2 329 aa20.07■□□□□ 0.8
SPTSSA-201ENST00000298130 SCGB1D1O95968 90 aa20.06■□□□□ 0.8
SPTSSA-201ENST00000298130 EFNB3Q15768 340 aa20.06■□□□□ 0.8
SPTSSA-201ENST00000298130 DEFB124Q8NES8 71 aa20.06■□□□□ 0.8
SPTSSA-201ENST00000298130 TMEM18Q96B42 140 aa20.06■□□□□ 0.8
SPTSSA-201ENST00000298130 SARAFQ96BY9 339 aa20.06■□□□□ 0.8
SPTSSA-201ENST00000298130 A8MWP6 167 aa20.06■□□□□ 0.8
SPTSSA-201ENST00000298130 ADMP35318 185 aa20.06■□□□□ 0.8
SPTSSA-201ENST00000298130 C17orf58Q2M2W7 97 aa20.06■□□□□ 0.8
SPTSSA-201ENST00000298130 FAM216AQ8WUB2 273 aa20.06■□□□□ 0.8
SPTSSA-201ENST00000298130 ELOVL5Q9NYP7 299 aa20.06■□□□□ 0.8
SPTSSA-201ENST00000298130 K7EN84 100 aa20.06■□□□□ 0.8
SPTSSA-201ENST00000298130 CGAP01215 116 aa20.06■□□□□ 0.8
SPTSSA-201ENST00000298130 TYMSP04818 313 aa20.06■□□□□ 0.8
SPTSSA-201ENST00000298130 TIMP3P35625 211 aa20.06■□□□□ 0.8
SPTSSA-201ENST00000298130 PDLIM4P50479 330 aa20.06■□□□□ 0.8
SPTSSA-201ENST00000298130 TMEM144Q7Z5S9 345 aa20.06■□□□□ 0.8
SPTSSA-201ENST00000298130 RAB1CQ92928 201 aa20.06■□□□□ 0.8
SPTSSA-201ENST00000298130 SLC25A15Q9Y619 301 aa20.06■□□□□ 0.8
SPTSSA-201ENST00000298130 TMPRSS2O15393 492 aa20.05■□□□□ 0.8
SPTSSA-201ENST00000298130 CXorf1O96002 111 aa20.05■□□□□ 0.8
SPTSSA-201ENST00000298130 RPP30P78346 268 aaKnown RBP20.05■□□□□ 0.8
SPTSSA-201ENST00000298130 C22orf34Q6ZV56 151 aa20.05■□□□□ 0.8
SPTSSA-201ENST00000298130 MIR17HGQ75NE6 70 aa20.05■□□□□ 0.8
SPTSSA-201ENST00000298130 NPVFQ9HCQ7 196 aa20.05■□□□□ 0.8
SPTSSA-201ENST00000298130 SPTBN2O15020 2390 aa20.05■□□□□ 0.8
SPTSSA-201ENST00000298130 NPY1RP25929 384 aa20.05■□□□□ 0.8
SPTSSA-201ENST00000298130 GCHFRP30047 84 aa20.05■□□□□ 0.8
SPTSSA-201ENST00000298130 GBGT1Q8N5D6 347 aa20.05■□□□□ 0.8
SPTSSA-201ENST00000298130 SLC24A4Q8NFF2 622 aa20.05■□□□□ 0.8
SPTSSA-201ENST00000298130 LRFN3Q9BTN0 628 aa20.04■□□□□ 0.8
SPTSSA-201ENST00000298130 PCNX1Q96RV3 2341 aa20.04■□□□□ 0.8
SPTSSA-201ENST00000298130 C1orf162Q8NEQ5 155 aaPredicted RBP20.04■□□□□ 0.8
SPTSSA-201ENST00000298130 RND1Q92730 232 aa20.04■□□□□ 0.8
SPTSSA-201ENST00000298130 PKDREJQ9NTG1 2253 aa20.04■□□□□ 0.8
SPTSSA-201ENST00000298130 IGKV1-16P04430 117 aa20.03■□□□□ 0.8
SPTSSA-201ENST00000298130 PAX5Q02548 391 aa20.03■□□□□ 0.8
SPTSSA-201ENST00000298130 TEX38Q6PEX7 206 aa20.03■□□□□ 0.8
SPTSSA-201ENST00000298130 TRAT1Q6PIZ9 186 aa20.03■□□□□ 0.8
SPTSSA-201ENST00000298130 OR10G8Q8NGN5 311 aa20.03■□□□□ 0.8
SPTSSA-201ENST00000298130 DDB2Q92466 427 aa20.03■□□□□ 0.8
SPTSSA-201ENST00000298130 CCL13Q99616 98 aa20.03■□□□□ 0.8
SPTSSA-201ENST00000298130 LSM4Q9Y4Z0 139 aaKnown RBP20.03■□□□□ 0.8
SPTSSA-201ENST00000298130 C15orf61A6NNL5 157 aa20.03■□□□□ 0.8
SPTSSA-201ENST00000298130 TEPPQ6URK8 271 aa20.03■□□□□ 0.8
SPTSSA-201ENST00000298130 FAM216BQ8N7L0 139 aa20.03■□□□□ 0.8
SPTSSA-201ENST00000298130 TRAV17A0A0B4J275 112 aa20.02■□□□□ 0.8
SPTSSA-201ENST00000298130 SLC35B1P78383 322 aa20.02■□□□□ 0.8
SPTSSA-201ENST00000298130 ZNF90Q03938 601 aa20.02■□□□□ 0.8
SPTSSA-201ENST00000298130 ZNF474Q6S9Z5 364 aaPredicted RBP20.02■□□□□ 0.8
SPTSSA-201ENST00000298130 OR4S2Q8NH73 311 aa20.02■□□□□ 0.8
SPTSSA-201ENST00000298130 PPP1R35Q8TAP8 253 aa20.02■□□□□ 0.8
SPTSSA-201ENST00000298130 MPDU1O75352 247 aa20.02■□□□□ 0.8
SPTSSA-201ENST00000298130 LCN2P80188 198 aa20.02■□□□□ 0.8
SPTSSA-201ENST00000298130 MRPS11P82912 194 aaKnown RBP20.02■□□□□ 0.8
SPTSSA-201ENST00000298130 OTOGLQ3ZCN5 2332 aa20.02■□□□□ 0.8
SPTSSA-201ENST00000298130 ATMQ13315 3056 aa20.01■□□□□ 0.79
SPTSSA-201ENST00000298130 F2RL2O00254 374 aa20.01■□□□□ 0.79
SPTSSA-201ENST00000298130 AARDQ4LEZ3 155 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms