RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 S1PR3Q99500 378 aa11.16□□□□□ -0.62
TTC39B-201ENST00000297615 AGMATQ9BSE5 352 aa11.16□□□□□ -0.62
TTC39B-201ENST00000297615 PSMG3Q9BT73 122 aaPredicted RBP11.16□□□□□ -0.62
TTC39B-201ENST00000297615 FUT9Q9Y231 359 aa11.16□□□□□ -0.62
TTC39B-201ENST00000297615 SETD2Q9BYW2 2564 aaPredicted RBP11.16□□□□□ -0.62
TTC39B-201ENST00000297615 TET2Q6N021 2002 aaPredicted RBP11.16□□□□□ -0.62
TTC39B-201ENST00000297615 A0A1B0GUS0 222 aa11.16□□□□□ -0.62
TTC39B-201ENST00000297615 TMEM210A6NLX4 147 aa11.16□□□□□ -0.62
TTC39B-201ENST00000297615 GZMHP20718 246 aa11.16□□□□□ -0.62
TTC39B-201ENST00000297615 CD1BP29016 333 aa11.16□□□□□ -0.62
TTC39B-201ENST00000297615 C10orf55Q5SWW7 151 aa11.16□□□□□ -0.62
TTC39B-201ENST00000297615 MBD3L1Q8WWY6 194 aa11.16□□□□□ -0.62
TTC39B-201ENST00000297615 RAXQ9Y2V3 346 aa11.16□□□□□ -0.62
TTC39B-201ENST00000297615 NPIPB11E5RHQ5 1161 aa11.15□□□□□ -0.62
TTC39B-201ENST00000297615 SPINK4O60575 86 aa11.15□□□□□ -0.62
TTC39B-201ENST00000297615 CD24P25063 80 aa11.15□□□□□ -0.62
TTC39B-201ENST00000297615 ERVK-16P61578 105 aa11.15□□□□□ -0.62
TTC39B-201ENST00000297615 GAMTQ14353 236 aa11.15□□□□□ -0.62
TTC39B-201ENST00000297615 IGFL2Q6UWQ7 119 aa11.15□□□□□ -0.62
TTC39B-201ENST00000297615 OR10W1Q8NGF6 305 aa11.15□□□□□ -0.62
TTC39B-201ENST00000297615 DYNLRB1Q9NP97 96 aa11.15□□□□□ -0.62
TTC39B-201ENST00000297615 CTXND1A0A1B0GTU2 59 aa11.15□□□□□ -0.62
TTC39B-201ENST00000297615 MBD3L4A6NDZ8 208 aaPredicted RBP11.15□□□□□ -0.62
TTC39B-201ENST00000297615 MBD3L3A6NE82 208 aaPredicted RBP11.15□□□□□ -0.62
TTC39B-201ENST00000297615 MBD3L5A6NJ08 208 aaPredicted RBP11.15□□□□□ -0.62
TTC39B-201ENST00000297615 PPP5D1E7EU14 171 aa11.15□□□□□ -0.62
TTC39B-201ENST00000297615 IRF2P14316 349 aa11.15□□□□□ -0.62
TTC39B-201ENST00000297615 FAM78BQ5VT40 261 aa11.15□□□□□ -0.62
TTC39B-201ENST00000297615 DPPA3Q6W0C5 159 aa11.15□□□□□ -0.62
TTC39B-201ENST00000297615 MBD3L2Q8NHZ7 208 aaPredicted RBP11.15□□□□□ -0.62
TTC39B-201ENST00000297615 OR51M1Q9H341 326 aa11.15□□□□□ -0.62
TTC39B-201ENST00000297615 NAT8Q9UHE5 227 aa11.15□□□□□ -0.62
TTC39B-201ENST00000297615 SAA2-SAA4A0A096LPE2 208 aa11.15□□□□□ -0.63
TTC39B-201ENST00000297615 SRRM5B3KS81 715 aa11.15□□□□□ -0.63
TTC39B-201ENST00000297615 C16orf97H3BN30 126 aa11.15□□□□□ -0.63
TTC39B-201ENST00000297615 IGLV1-44P01699 117 aa11.15□□□□□ -0.63
TTC39B-201ENST00000297615 SAA2P0DJI9 122 aaPredicted RBP11.15□□□□□ -0.63
TTC39B-201ENST00000297615 TIMM23BQ5SRD1 257 aa11.15□□□□□ -0.63
TTC39B-201ENST00000297615 OR4X1Q8NH49 305 aa11.15□□□□□ -0.63
TTC39B-201ENST00000297615 OR6C3Q9NZP0 311 aa11.15□□□□□ -0.63
TTC39B-201ENST00000297615 A0A087WWC5 75 aa11.14□□□□□ -0.63
TTC39B-201ENST00000297615 C15orf62A8K5M9 175 aa11.14□□□□□ -0.63
TTC39B-201ENST00000297615 C15orf65H3BRN8 121 aa11.14□□□□□ -0.63
TTC39B-201ENST00000297615 PHOX2AO14813 284 aa11.14□□□□□ -0.63
TTC39B-201ENST00000297615 C1QTNF9P0C862 333 aa11.14□□□□□ -0.63
TTC39B-201ENST00000297615 DUTP33316 252 aaKnown RBP11.14□□□□□ -0.63
TTC39B-201ENST00000297615 MRPS11P82912 194 aaKnown RBP11.14□□□□□ -0.63
TTC39B-201ENST00000297615 KDF1Q8NAX2 398 aaPredicted RBP11.14□□□□□ -0.63
TTC39B-201ENST00000297615 MALSU1Q96EH3 234 aa11.14□□□□□ -0.63
TTC39B-201ENST00000297615 SIRT7Q9NRC8 400 aa11.14□□□□□ -0.63
TTC39B-201ENST00000297615 CREBBPQ92793 2442 aa11.14□□□□□ -0.63
TTC39B-201ENST00000297615 TRAV1-1A0A0B4J248 108 aa11.14□□□□□ -0.63
TTC39B-201ENST00000297615 GLRXP35754 106 aa11.14□□□□□ -0.63
TTC39B-201ENST00000297615 CDSNQ15517 529 aa11.14□□□□□ -0.63
TTC39B-201ENST00000297615 SPATA31B1PQ5VZV4 182 aa11.14□□□□□ -0.63
TTC39B-201ENST00000297615 Q8NA96 180 aa11.14□□□□□ -0.63
TTC39B-201ENST00000297615 OR10A7Q8NGE5 316 aa11.14□□□□□ -0.63
TTC39B-201ENST00000297615 PACRGQ96M98 296 aaPredicted RBP11.14□□□□□ -0.63
TTC39B-201ENST00000297615 MS4A5Q9H3V2 200 aa11.14□□□□□ -0.63
TTC39B-201ENST00000297615 HES4Q9HCC6 221 aa11.14□□□□□ -0.63
TTC39B-201ENST00000297615 TMEM140Q9NV12 185 aa11.14□□□□□ -0.63
TTC39B-201ENST00000297615 RNF7Q9UBF6 113 aa11.14□□□□□ -0.63
TTC39B-201ENST00000297615 ARL14EPLP0DKL9 152 aa11.13□□□□□ -0.63
TTC39B-201ENST00000297615 KITLGP21583 273 aa11.13□□□□□ -0.63
TTC39B-201ENST00000297615 ZNF114Q8NC26 417 aa11.13□□□□□ -0.63
TTC39B-201ENST00000297615 HIPK2Q9H2X6 1198 aa11.13□□□□□ -0.63
TTC39B-201ENST00000297615 XKRY2A2RUG3 117 aa11.13□□□□□ -0.63
TTC39B-201ENST00000297615 NDUFS6O75380 124 aaKnown RBP11.13□□□□□ -0.63
TTC39B-201ENST00000297615 KBTBD11O94819 623 aa11.13□□□□□ -0.63
TTC39B-201ENST00000297615 NPPCP23582 126 aa11.13□□□□□ -0.63
TTC39B-201ENST00000297615 HIST3H2BBQ8N257 126 aa11.13□□□□□ -0.63
TTC39B-201ENST00000297615 KIR3DL3Q8N743 410 aa11.13□□□□□ -0.63
TTC39B-201ENST00000297615 HSD17B10Q99714 261 aaKnown RBP11.13□□□□□ -0.63
TTC39B-201ENST00000297615 SAP30LQ9HAJ7 183 aa11.13□□□□□ -0.63
TTC39B-201ENST00000297615 RPL31P62899 125 aaKnown RBP11.12□□□□□ -0.63
TTC39B-201ENST00000297615 PNRC1Q12796 327 aaPredicted RBP11.12□□□□□ -0.63
TTC39B-201ENST00000297615 EPG5Q9HCE0 2579 aa11.12□□□□□ -0.63
TTC39B-201ENST00000297615 C17orf112F2Z3M2 114 aa11.12□□□□□ -0.63
TTC39B-201ENST00000297615 MGST3O14880 152 aa11.12□□□□□ -0.63
TTC39B-201ENST00000297615 RAB29O14966 203 aa11.12□□□□□ -0.63
TTC39B-201ENST00000297615 CHRNB4P30926 498 aa11.12□□□□□ -0.63
TTC39B-201ENST00000297615 ACOT6Q3I5F7 207 aaPredicted RBP11.12□□□□□ -0.63
TTC39B-201ENST00000297615 UNQ6494/PRO21346Q6UXR6 183 aa11.12□□□□□ -0.63
TTC39B-201ENST00000297615 TCF23Q7RTU1 214 aa11.12□□□□□ -0.63
TTC39B-201ENST00000297615 FAM57AQ8TBR7 257 aa11.12□□□□□ -0.63
TTC39B-201ENST00000297615 NEIL1Q96FI4 390 aaPredicted RBP11.12□□□□□ -0.63
TTC39B-201ENST00000297615 SGK494Q96LW2 274 aa11.12□□□□□ -0.63
TTC39B-201ENST00000297615 COL25A1Q9BXS0 654 aaPredicted RBP11.12□□□□□ -0.63
TTC39B-201ENST00000297615 LRRK2Q5S007 2527 aa11.12□□□□□ -0.63
TTC39B-201ENST00000297615 TRGV10A0A0A0MS01 117 aa11.12□□□□□ -0.63
TTC39B-201ENST00000297615 ZNF320A2RRD8 509 aa11.12□□□□□ -0.63
TTC39B-201ENST00000297615 SRRM4A7MD48 611 aaKnown RBP11.12□□□□□ -0.63
TTC39B-201ENST00000297615 PMS2P5A8MQ11 134 aa11.12□□□□□ -0.63
TTC39B-201ENST00000297615 SEC14L6B5MCN3 397 aa11.12□□□□□ -0.63
TTC39B-201ENST00000297615 CRYABP02511 175 aaKnown RBP11.12□□□□□ -0.63
TTC39B-201ENST00000297615 CD33P20138 364 aa11.12□□□□□ -0.63
TTC39B-201ENST00000297615 COX7A1P24310 79 aa11.12□□□□□ -0.63
TTC39B-201ENST00000297615 LY6DQ14210 128 aa11.12□□□□□ -0.63
TTC39B-201ENST00000297615 SP5Q6BEB4 398 aaPredicted RBP11.12□□□□□ -0.63
TTC39B-201ENST00000297615 TMEM108Q6UXF1 575 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms