RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 CCL3L1P16619 93 aa14.9□□□□□ -0.02
CDC42EP3-201ENST00000295324 TUBA4BQ9H853 241 aa14.9□□□□□ -0.02
CDC42EP3-201ENST00000295324 FAM74A7A6NL05 159 aa14.9□□□□□ -0.02
CDC42EP3-201ENST00000295324 CRXO43186 299 aaPredicted RBP14.9□□□□□ -0.02
CDC42EP3-201ENST00000295324 ZNF672Q499Z4 452 aaPredicted RBP14.9□□□□□ -0.02
CDC42EP3-201ENST00000295324 AWAT1Q58HT5 328 aa14.9□□□□□ -0.02
CDC42EP3-201ENST00000295324 ACAA1P09110 424 aaPredicted RBP14.9□□□□□ -0.02
CDC42EP3-201ENST00000295324 CCL1P22362 96 aa14.9□□□□□ -0.02
CDC42EP3-201ENST00000295324 MDC1Q14676 2089 aaKnown RBP14.9□□□□□ -0.02
CDC42EP3-201ENST00000295324 ISLRO14498 428 aa14.89□□□□□ -0.03
CDC42EP3-201ENST00000295324 CD300CQ08708 224 aa14.89□□□□□ -0.03
CDC42EP3-201ENST00000295324 ARPC1AQ92747 370 aa14.89□□□□□ -0.03
CDC42EP3-201ENST00000295324 PRSS22Q9GZN4 317 aa14.89□□□□□ -0.03
CDC42EP3-201ENST00000295324 TMEM133Q9H2Q1 129 aa14.89□□□□□ -0.03
CDC42EP3-201ENST00000295324 SMDT1Q9H4I9 107 aa14.89□□□□□ -0.03
CDC42EP3-201ENST00000295324 TMEM189A5PLL7 270 aa14.89□□□□□ -0.03
CDC42EP3-201ENST00000295324 BCL2P10415 239 aa14.89□□□□□ -0.03
CDC42EP3-201ENST00000295324 TMEM218A2RU14 115 aa14.89□□□□□ -0.03
CDC42EP3-201ENST00000295324 GGCTO75223 188 aaKnown RBP14.89□□□□□ -0.03
CDC42EP3-201ENST00000295324 DLK1P80370 383 aa14.89□□□□□ -0.03
CDC42EP3-201ENST00000295324 PACRGQ96M98 296 aaPredicted RBP14.89□□□□□ -0.03
CDC42EP3-201ENST00000295324 FBXL7Q9UJT9 491 aa14.89□□□□□ -0.03
CDC42EP3-201ENST00000295324 IGHV3-35A0A0C4DH35 117 aa14.89□□□□□ -0.03
CDC42EP3-201ENST00000295324 AREGP15514 252 aa14.89□□□□□ -0.03
CDC42EP3-201ENST00000295324 RPS11P62280 158 aaKnown RBP eCLIP14.89□□□□□ -0.03
CDC42EP3-201ENST00000295324 HIST3H3Q16695 136 aa14.89□□□□□ -0.03
CDC42EP3-201ENST00000295324 ZNF362Q5T0B9 420 aaPredicted RBP14.89□□□□□ -0.03
CDC42EP3-201ENST00000295324 PEAR1Q5VY43 1037 aaPredicted RBP14.89□□□□□ -0.03
CDC42EP3-201ENST00000295324 SCGB1D4Q6XE38 83 aa14.89□□□□□ -0.03
CDC42EP3-201ENST00000295324 POLEQ07864 2286 aa14.89□□□□□ -0.03
CDC42EP3-201ENST00000295324 A8MWL6 223 aa14.89□□□□□ -0.03
CDC42EP3-201ENST00000295324 IL4P05112 153 aa14.89□□□□□ -0.03
CDC42EP3-201ENST00000295324 MRPL20Q9BYC9 149 aaKnown RBP14.89□□□□□ -0.03
CDC42EP3-201ENST00000295324 SLC25A15Q9Y619 301 aa14.89□□□□□ -0.03
CDC42EP3-201ENST00000295324 ZNF253O75346 499 aa14.88□□□□□ -0.03
CDC42EP3-201ENST00000295324 FOXG1P55316 489 aaPredicted RBP14.88□□□□□ -0.03
CDC42EP3-201ENST00000295324 COL4A6Q14031 1691 aa14.88□□□□□ -0.03
CDC42EP3-201ENST00000295324 MBNL2Q5VZF2 373 aaKnown RBP14.88□□□□□ -0.03
CDC42EP3-201ENST00000295324 MRPL54Q6P161 138 aaKnown RBP14.88□□□□□ -0.03
CDC42EP3-201ENST00000295324 MAP1LC3CQ9BXW4 147 aa14.88□□□□□ -0.03
CDC42EP3-201ENST00000295324 SNRNP200O75643 2136 aaKnown RBP14.88□□□□□ -0.03
CDC42EP3-201ENST00000295324 IGFBP3P17936 291 aaPredicted RBP14.88□□□□□ -0.03
CDC42EP3-201ENST00000295324 TCF20Q9UGU0 1960 aaKnown RBP14.88□□□□□ -0.03
CDC42EP3-201ENST00000295324 CLPSP04118 112 aa14.88□□□□□ -0.03
CDC42EP3-201ENST00000295324 HERVK_113P61574 105 aa14.88□□□□□ -0.03
CDC42EP3-201ENST00000295324 CRYGSP22914 178 aa14.87□□□□□ -0.03
CDC42EP3-201ENST00000295324 FGFBP3Q8TAT2 258 aa14.87□□□□□ -0.03
CDC42EP3-201ENST00000295324 GATAD1Q8WUU5 269 aa14.87□□□□□ -0.03
CDC42EP3-201ENST00000295324 HSPB7Q9UBY9 170 aa14.87□□□□□ -0.03
CDC42EP3-201ENST00000295324 YPEL1O60688 119 aa14.87□□□□□ -0.03
CDC42EP3-201ENST00000295324 NUTF2P61970 127 aaKnown RBP14.87□□□□□ -0.03
CDC42EP3-201ENST00000295324 COLCA1Q6ZS62 124 aa14.87□□□□□ -0.03
CDC42EP3-201ENST00000295324 STPG2Q8N412 459 aa14.87□□□□□ -0.03
CDC42EP3-201ENST00000295324 YPEL2Q96QA6 119 aa14.87□□□□□ -0.03
CDC42EP3-201ENST00000295324 TP53RKQ96S44 253 aa14.87□□□□□ -0.03
CDC42EP3-201ENST00000295324 MYO7BQ6PIF6 2116 aa14.87□□□□□ -0.03
CDC42EP3-201ENST00000295324 DLX6P56179 175 aa14.87□□□□□ -0.03
CDC42EP3-201ENST00000295324 RND3P61587 244 aa14.87□□□□□ -0.03
CDC42EP3-201ENST00000295324 C21orf62-AS1Q17RA5 79 aa14.87□□□□□ -0.03
CDC42EP3-201ENST00000295324 ERVH48-1M5A8F1 160 aa14.87□□□□□ -0.03
CDC42EP3-201ENST00000295324 IFITM3Q01628 133 aa14.87□□□□□ -0.03
CDC42EP3-201ENST00000295324 OR4A47Q6IF82 309 aa14.87□□□□□ -0.03
CDC42EP3-201ENST00000295324 OR51M1Q9H341 326 aa14.87□□□□□ -0.03
CDC42EP3-201ENST00000295324 CACNA1DQ01668 2161 aa14.87□□□□□ -0.03
CDC42EP3-201ENST00000295324 RPLP1P05386 114 aaKnown RBP14.87□□□□□ -0.03
CDC42EP3-201ENST00000295324 PRSS33Q8NF86 280 aa14.87□□□□□ -0.03
CDC42EP3-201ENST00000295324 PLPPR1Q8TBJ4 325 aa14.87□□□□□ -0.03
CDC42EP3-201ENST00000295324 GAS1P54826 345 aa14.86□□□□□ -0.03
CDC42EP3-201ENST00000295324 SSC4DQ8WTU2 575 aa14.86□□□□□ -0.03
CDC42EP3-201ENST00000295324 GTF3AQ92664 365 aaKnown RBP14.86□□□□□ -0.03
CDC42EP3-201ENST00000295324 SLC25A33Q9BSK2 321 aa14.86□□□□□ -0.03
CDC42EP3-201ENST00000295324 MRPL32Q9BYC8 188 aaKnown RBP14.86□□□□□ -0.03
CDC42EP3-201ENST00000295324 C21orf62Q9NYP8 219 aa14.86□□□□□ -0.03
CDC42EP3-201ENST00000295324 A6NDN8 102 aa14.86□□□□□ -0.03
CDC42EP3-201ENST00000295324 CA2P00918 260 aa14.86□□□□□ -0.03
CDC42EP3-201ENST00000295324 SMIM6P0DI80 62 aa14.86□□□□□ -0.03
CDC42EP3-201ENST00000295324 SIGLEC5O15389 551 aa14.86□□□□□ -0.03
CDC42EP3-201ENST00000295324 ISOC2Q96AB3 205 aa14.86□□□□□ -0.03
CDC42EP3-201ENST00000295324 SIP14410 1827 aa14.86□□□□□ -0.03
CDC42EP3-201ENST00000295324 NBR2O15453 112 aa14.86□□□□□ -0.03
CDC42EP3-201ENST00000295324 SIAH2O43255 324 aa14.86□□□□□ -0.03
CDC42EP3-201ENST00000295324 FAM181BA6NEQ2 426 aa14.85□□□□□ -0.03
CDC42EP3-201ENST00000295324 MAS1LP35410 378 aa14.85□□□□□ -0.03
CDC42EP3-201ENST00000295324 LYZL4Q96KX0 146 aa14.85□□□□□ -0.03
CDC42EP3-201ENST00000295324 AQP10Q96PS8 301 aa14.85□□□□□ -0.03
CDC42EP3-201ENST00000295324 TRAF4Q9BUZ4 470 aaPredicted RBP14.85□□□□□ -0.03
CDC42EP3-201ENST00000295324 C17orf98A8MV24 154 aa14.85□□□□□ -0.03
CDC42EP3-201ENST00000295324 H3BQ15 152 aa14.85□□□□□ -0.03
CDC42EP3-201ENST00000295324 ZNF25P17030 456 aaPredicted RBP14.85□□□□□ -0.03
CDC42EP3-201ENST00000295324 NABP2Q9BQ15 211 aa14.85□□□□□ -0.03
CDC42EP3-201ENST00000295324 PROB1E7EW31 1015 aa14.85□□□□□ -0.03
CDC42EP3-201ENST00000295324 UCP1P25874 307 aa14.85□□□□□ -0.03
CDC42EP3-201ENST00000295324 IGHV3-48P01763 117 aa14.85□□□□□ -0.03
CDC42EP3-201ENST00000295324 FBLN5Q9UBX5 448 aa14.85□□□□□ -0.03
CDC42EP3-201ENST00000295324 H3BVH4 76 aa14.84□□□□□ -0.03
CDC42EP3-201ENST00000295324 VDAC2P45880 294 aaPredicted RBP14.84□□□□□ -0.03
CDC42EP3-201ENST00000295324 IFI27L2Q9H2X8 130 aa14.84□□□□□ -0.03
CDC42EP3-201ENST00000295324 SHISA3A0PJX4 238 aa14.84□□□□□ -0.03
CDC42EP3-201ENST00000295324 GPX1P07203 203 aa14.84□□□□□ -0.03
CDC42EP3-201ENST00000295324 CBLN2Q8IUK8 224 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms