RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 ZNF737O75373 536 aa11.09□□□□□ -0.63
KCNIP3-201ENST00000295225 MDH2P40926 338 aaKnown RBP11.09□□□□□ -0.63
KCNIP3-201ENST00000295225 NKX6-1P78426 367 aaPredicted RBP11.09□□□□□ -0.63
KCNIP3-201ENST00000295225 TGFBR3Q03167 851 aa11.09□□□□□ -0.63
KCNIP3-201ENST00000295225 SLC38A11Q08AI6 406 aa11.09□□□□□ -0.63
KCNIP3-201ENST00000295225 OR4A47Q6IF82 309 aa11.09□□□□□ -0.63
KCNIP3-201ENST00000295225 CABLES2Q9BTV7 478 aa11.09□□□□□ -0.63
KCNIP3-201ENST00000295225 CHRDL1Q9BU40 450 aa11.09□□□□□ -0.63
KCNIP3-201ENST00000295225 ZZEF1O43149 2961 aa11.09□□□□□ -0.63
KCNIP3-201ENST00000295225 COL12A1Q99715 3063 aa11.09□□□□□ -0.63
KCNIP3-201ENST00000295225 ZFHX2Q9C0A1 2572 aaPredicted RBP11.09□□□□□ -0.63
KCNIP3-201ENST00000295225 IGKV3D-15A0A087WSY6 115 aa11.08□□□□□ -0.63
KCNIP3-201ENST00000295225 HSPB1P04792 205 aaKnown RBP11.08□□□□□ -0.63
KCNIP3-201ENST00000295225 PSG7Q13046 419 aa11.08□□□□□ -0.63
KCNIP3-201ENST00000295225 SMIM7Q9BQ49 75 aa11.08□□□□□ -0.63
KCNIP3-201ENST00000295225 SLC39A9Q9NUM3 307 aa11.08□□□□□ -0.63
KCNIP3-201ENST00000295225 NBASA2RRP1 2371 aa11.08□□□□□ -0.64
KCNIP3-201ENST00000295225 AREGP15514 252 aa11.08□□□□□ -0.64
KCNIP3-201ENST00000295225 BRWD1-AS2P59051 145 aa11.08□□□□□ -0.64
KCNIP3-201ENST00000295225 RANP62826 216 aaKnown RBP11.08□□□□□ -0.64
KCNIP3-201ENST00000295225 BAXQ07812 192 aa11.08□□□□□ -0.64
KCNIP3-201ENST00000295225 BATFQ16520 125 aa11.08□□□□□ -0.64
KCNIP3-201ENST00000295225 OR10X1Q8NGY0 326 aa11.08□□□□□ -0.64
KCNIP3-201ENST00000295225 STRADBQ9C0K7 418 aa11.08□□□□□ -0.64
KCNIP3-201ENST00000295225 HCFC1P51610 2035 aa11.08□□□□□ -0.64
KCNIP3-201ENST00000295225 PTPRZ1P23471 2315 aaPredicted RBP11.08□□□□□ -0.64
KCNIP3-201ENST00000295225 TRAV38-1A0A0B4J264 116 aa11.08□□□□□ -0.64
KCNIP3-201ENST00000295225 C12orf77C9JDV5 145 aa11.08□□□□□ -0.64
KCNIP3-201ENST00000295225 PDE6DO43924 150 aa11.08□□□□□ -0.64
KCNIP3-201ENST00000295225 ACP1P24666 158 aa11.08□□□□□ -0.64
KCNIP3-201ENST00000295225 PPP1CBP62140 327 aa11.08□□□□□ -0.64
KCNIP3-201ENST00000295225 P2RY6Q15077 328 aa11.08□□□□□ -0.64
KCNIP3-201ENST00000295225 TCTEX1D4Q5JR98 221 aa11.08□□□□□ -0.64
KCNIP3-201ENST00000295225 OR4F5Q8NH21 305 aa11.08□□□□□ -0.64
KCNIP3-201ENST00000295225 OR4F4Q96R69 305 aa11.08□□□□□ -0.64
KCNIP3-201ENST00000295225 FAM3BP58499 235 aaPredicted RBP11.07□□□□□ -0.64
KCNIP3-201ENST00000295225 RPL32P62910 135 aaKnown RBP11.07□□□□□ -0.64
KCNIP3-201ENST00000295225 SP5Q6BEB4 398 aaPredicted RBP11.07□□□□□ -0.64
KCNIP3-201ENST00000295225 RAX2Q96IS3 184 aa11.07□□□□□ -0.64
KCNIP3-201ENST00000295225 DERL1Q9BUN8 251 aa11.07□□□□□ -0.64
KCNIP3-201ENST00000295225 TMEM9BQ9NQ34 198 aa11.07□□□□□ -0.64
KCNIP3-201ENST00000295225 LAMP3Q9UQV4 416 aa11.07□□□□□ -0.64
KCNIP3-201ENST00000295225 A0A1B0GU03 582 aa11.07□□□□□ -0.64
KCNIP3-201ENST00000295225 ODAMA1E959 279 aa11.07□□□□□ -0.64
KCNIP3-201ENST00000295225 LINC00473A8K010 186 aa11.07□□□□□ -0.64
KCNIP3-201ENST00000295225 PAX2Q02962 417 aa11.07□□□□□ -0.64
KCNIP3-201ENST00000295225 FAM201AQ5SY85 155 aa11.07□□□□□ -0.64
KCNIP3-201ENST00000295225 ASPHD1Q5U4P2 390 aa11.07□□□□□ -0.64
KCNIP3-201ENST00000295225 C16orf82Q7Z2V1 217 aa11.07□□□□□ -0.64
KCNIP3-201ENST00000295225 TMEM37Q8WXS4 190 aa11.07□□□□□ -0.64
KCNIP3-201ENST00000295225 TAF15Q92804 592 aaKnown RBP eCLIP11.07□□□□□ -0.64
KCNIP3-201ENST00000295225 SSBP4Q9BWG4 385 aaPredicted RBP11.07□□□□□ -0.64
KCNIP3-201ENST00000295225 WDR61Q9GZS3 305 aaKnown RBP11.07□□□□□ -0.64
KCNIP3-201ENST00000295225 PATZ1Q9HBE1 687 aaKnown RBP11.07□□□□□ -0.64
KCNIP3-201ENST00000295225 IGHV3OR15-7A0A075B7D8 119 aa11.06□□□□□ -0.64
KCNIP3-201ENST00000295225 LOC102724200A0A096LPH7 203 aaPredicted RBP11.06□□□□□ -0.64
KCNIP3-201ENST00000295225 OR7C2O60412 319 aa11.06□□□□□ -0.64
KCNIP3-201ENST00000295225 SP1P08047 785 aa11.06□□□□□ -0.64
KCNIP3-201ENST00000295225 SPRNQ5BIV9 151 aa11.06□□□□□ -0.64
KCNIP3-201ENST00000295225 PEAR1Q5VY43 1037 aaPredicted RBP11.06□□□□□ -0.64
KCNIP3-201ENST00000295225 ZNF497Q6ZNH5 498 aa11.06□□□□□ -0.64
KCNIP3-201ENST00000295225 CFHR4Q92496 578 aa11.06□□□□□ -0.64
KCNIP3-201ENST00000295225 HIST1H2BLQ99880 126 aa11.06□□□□□ -0.64
KCNIP3-201ENST00000295225 ASCL2Q99929 193 aa11.06□□□□□ -0.64
KCNIP3-201ENST00000295225 J3QT63 122 aa11.06□□□□□ -0.64
KCNIP3-201ENST00000295225 PAGE4O60829 102 aa11.06□□□□□ -0.64
KCNIP3-201ENST00000295225 IGHV1-2P23083 117 aa11.06□□□□□ -0.64
KCNIP3-201ENST00000295225 PAX5Q02548 391 aa11.06□□□□□ -0.64
KCNIP3-201ENST00000295225 RAB40CQ96S21 281 aa11.06□□□□□ -0.64
KCNIP3-201ENST00000295225 ABI3Q9P2A4 366 aa11.06□□□□□ -0.64
KCNIP3-201ENST00000295225 DCHS2Q6V1P9 2916 aa11.06□□□□□ -0.64
KCNIP3-201ENST00000295225 PLXNB1O43157 2135 aa11.06□□□□□ -0.64
KCNIP3-201ENST00000295225 MLNRO43193 412 aa11.05□□□□□ -0.64
KCNIP3-201ENST00000295225 SS18L1O75177 396 aaPredicted RBP11.05□□□□□ -0.64
KCNIP3-201ENST00000295225 HAND1O96004 215 aa11.05□□□□□ -0.64
KCNIP3-201ENST00000295225 CD33P20138 364 aa11.05□□□□□ -0.64
KCNIP3-201ENST00000295225 EDDM3BP56851 147 aa11.05□□□□□ -0.64
KCNIP3-201ENST00000295225 IQCJQ1A5X6 159 aa11.05□□□□□ -0.64
KCNIP3-201ENST00000295225 LRRC75BQ2VPJ9 315 aa11.05□□□□□ -0.64
KCNIP3-201ENST00000295225 INO80CQ6PI98 192 aaPredicted RBP11.05□□□□□ -0.64
KCNIP3-201ENST00000295225 TRIB1Q96RU8 372 aa11.05□□□□□ -0.64
KCNIP3-201ENST00000295225 SDF2L1Q9HCN8 221 aa11.05□□□□□ -0.64
KCNIP3-201ENST00000295225 RNF212BA8MTL3 300 aa11.05□□□□□ -0.64
KCNIP3-201ENST00000295225 NDUFB8O95169 186 aa11.05□□□□□ -0.64
KCNIP3-201ENST00000295225 HBZP02008 142 aa11.05□□□□□ -0.64
KCNIP3-201ENST00000295225 MFAP4P55083 255 aa11.05□□□□□ -0.64
KCNIP3-201ENST00000295225 OR13A1Q8NGR1 328 aa11.05□□□□□ -0.64
KCNIP3-201ENST00000295225 LINC00470Q9BZP3 86 aa11.05□□□□□ -0.64
KCNIP3-201ENST00000295225 ELOVL5Q9NYP7 299 aa11.05□□□□□ -0.64
KCNIP3-201ENST00000295225 MYOD1P15172 320 aa11.05□□□□□ -0.64
KCNIP3-201ENST00000295225 CCL11P51671 97 aa11.05□□□□□ -0.64
KCNIP3-201ENST00000295225 FFAR4Q5NUL3 377 aa11.05□□□□□ -0.64
KCNIP3-201ENST00000295225 Q6ZS49 121 aa11.05□□□□□ -0.64
KCNIP3-201ENST00000295225 SMIM20Q8N5G0 67 aa11.05□□□□□ -0.64
KCNIP3-201ENST00000295225 CDH20Q9HBT6 801 aa11.05□□□□□ -0.64
KCNIP3-201ENST00000295225 FAM90A10PA6NDY2 464 aa11.04□□□□□ -0.64
KCNIP3-201ENST00000295225 FAM90A18PA6NE21 464 aa11.04□□□□□ -0.64
KCNIP3-201ENST00000295225 FAM90A16PA6NEW6 464 aa11.04□□□□□ -0.64
KCNIP3-201ENST00000295225 FAM90A20PA6NIJ5 464 aa11.04□□□□□ -0.64
KCNIP3-201ENST00000295225 FAM90A8PA6NJQ4 464 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms