RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 ATP1A1-AS1Q5TC04 95 aa12.22□□□□□ -0.45
CCNF-201ENST00000293968 DMRTA1Q5VZB9 504 aa12.22□□□□□ -0.45
CCNF-201ENST00000293968 ACP7Q6ZNF0 438 aa12.22□□□□□ -0.45
CCNF-201ENST00000293968 OR2Z1Q8NG97 314 aa12.22□□□□□ -0.45
CCNF-201ENST00000293968 TRIB1Q96RU8 372 aa12.22□□□□□ -0.45
CCNF-201ENST00000293968 MYOD1P15172 320 aa12.21□□□□□ -0.45
CCNF-201ENST00000293968 VHLLQ6RSH7 139 aa12.21□□□□□ -0.45
CCNF-201ENST00000293968 NBEAQ8NFP9 2946 aa12.21□□□□□ -0.45
CCNF-201ENST00000293968 HELTA6NFD8 242 aa12.21□□□□□ -0.45
CCNF-201ENST00000293968 RPL19P84098 196 aaKnown RBP12.21□□□□□ -0.45
CCNF-201ENST00000293968 PRR31Q5SQ13 230 aa12.21□□□□□ -0.45
CCNF-201ENST00000293968 TEPPQ6URK8 271 aa12.21□□□□□ -0.45
CCNF-201ENST00000293968 NPVFQ9HCQ7 196 aa12.21□□□□□ -0.45
CCNF-201ENST00000293968 TCF19Q9Y242 345 aa12.21□□□□□ -0.45
CCNF-201ENST00000293968 K7EN84 100 aa12.21□□□□□ -0.46
CCNF-201ENST00000293968 DLEU1O43261 78 aa12.21□□□□□ -0.46
CCNF-201ENST00000293968 TCF21O43680 179 aa12.21□□□□□ -0.46
CCNF-201ENST00000293968 SP1P08047 785 aa12.21□□□□□ -0.46
CCNF-201ENST00000293968 TIGITQ495A1 244 aa12.21□□□□□ -0.46
CCNF-201ENST00000293968 CENPWQ5EE01 88 aa12.21□□□□□ -0.46
CCNF-201ENST00000293968 MIR17HGQ75NE6 70 aa12.21□□□□□ -0.46
CCNF-201ENST00000293968 FAM19A2Q8N3H0 131 aa12.21□□□□□ -0.46
CCNF-201ENST00000293968 TBL2Q9Y4P3 447 aaKnown RBP12.21□□□□□ -0.46
CCNF-201ENST00000293968 TNFSF13O75888 250 aa12.2□□□□□ -0.46
CCNF-201ENST00000293968 P0C879 139 aa12.2□□□□□ -0.46
CCNF-201ENST00000293968 CD46P15529 392 aa12.2□□□□□ -0.46
CCNF-201ENST00000293968 WNT10AQ9GZT5 417 aa12.2□□□□□ -0.46
CCNF-201ENST00000293968 CXXC4Q9H2H0 198 aa12.2□□□□□ -0.46
CCNF-201ENST00000293968 KLF13Q9Y2Y9 288 aaPredicted RBP12.2□□□□□ -0.46
CCNF-201ENST00000293968 MED13Q9UHV7 2174 aa12.2□□□□□ -0.46
CCNF-201ENST00000293968 IGFBP2P18065 325 aa12.2□□□□□ -0.46
CCNF-201ENST00000293968 DUTP33316 252 aaKnown RBP12.2□□□□□ -0.46
CCNF-201ENST00000293968 EFNB3Q15768 340 aa12.2□□□□□ -0.46
CCNF-201ENST00000293968 GNB4Q9HAV0 340 aa12.2□□□□□ -0.46
CCNF-201ENST00000293968 MPDU1O75352 247 aa12.2□□□□□ -0.46
CCNF-201ENST00000293968 NPY1RP25929 384 aa12.2□□□□□ -0.46
CCNF-201ENST00000293968 STARD4Q96DR4 205 aa12.2□□□□□ -0.46
CCNF-201ENST00000293968 IGHV1-2P23083 117 aa12.19□□□□□ -0.46
CCNF-201ENST00000293968 PRDX2P32119 198 aa12.19□□□□□ -0.46
CCNF-201ENST00000293968 VWC2Q2TAL6 325 aa12.19□□□□□ -0.46
CCNF-201ENST00000293968 SPATA45Q537H7 98 aa12.19□□□□□ -0.46
CCNF-201ENST00000293968 WDR82Q6UXN9 313 aa12.19□□□□□ -0.46
CCNF-201ENST00000293968 Q6ZN92 141 aa12.19□□□□□ -0.46
CCNF-201ENST00000293968 C11orf42Q8N5U0 333 aa12.19□□□□□ -0.46
CCNF-201ENST00000293968 ST6GALNAC3Q8NDV1 305 aa12.19□□□□□ -0.46
CCNF-201ENST00000293968 EAF1Q96JC9 268 aaPredicted RBP12.19□□□□□ -0.46
CCNF-201ENST00000293968 GABRA6Q16445 453 aa12.19□□□□□ -0.46
CCNF-201ENST00000293968 TPTE2P1Q5T6R2 138 aa12.19□□□□□ -0.46
CCNF-201ENST00000293968 TP53TG3Q9ULZ0 132 aa12.19□□□□□ -0.46
CCNF-201ENST00000293968 SRIP30626 198 aa12.19□□□□□ -0.46
CCNF-201ENST00000293968 BRS3P32247 399 aa12.19□□□□□ -0.46
CCNF-201ENST00000293968 GNG10P50151 68 aa12.19□□□□□ -0.46
CCNF-201ENST00000293968 MMDQ15546 238 aa12.19□□□□□ -0.46
CCNF-201ENST00000293968 ZNRF1Q8ND25 227 aa12.19□□□□□ -0.46
CCNF-201ENST00000293968 SLC24A4Q8NFF2 622 aa12.19□□□□□ -0.46
CCNF-201ENST00000293968 GP6Q9HCN6 339 aa12.19□□□□□ -0.46
CCNF-201ENST00000293968 FBXL7Q9UJT9 491 aa12.19□□□□□ -0.46
CCNF-201ENST00000293968 CA1P00915 261 aaPredicted RBP12.19□□□□□ -0.46
CCNF-201ENST00000293968 DEFB108BQ8NET1 73 aa12.19□□□□□ -0.46
CCNF-201ENST00000293968 LPAR2Q9HBW0 351 aa12.19□□□□□ -0.46
CCNF-201ENST00000293968 CADP27708 2225 aa12.18□□□□□ -0.46
CCNF-201ENST00000293968 GFRA3O60609 400 aa12.18□□□□□ -0.46
CCNF-201ENST00000293968 YPEL3P61236 119 aaPredicted RBP12.18□□□□□ -0.46
CCNF-201ENST00000293968 PRR27Q6MZM9 219 aa12.18□□□□□ -0.46
CCNF-201ENST00000293968 RAB1CQ92928 201 aa12.18□□□□□ -0.46
CCNF-201ENST00000293968 SSBP3Q9BWW4 388 aaPredicted RBP12.18□□□□□ -0.46
CCNF-201ENST00000293968 IQCF6A8MYZ5 107 aa12.18□□□□□ -0.46
CCNF-201ENST00000293968 SIAH2O43255 324 aa12.18□□□□□ -0.46
CCNF-201ENST00000293968 HNRNPA3P51991 378 aaKnown RBP12.18□□□□□ -0.46
CCNF-201ENST00000293968 LYG1Q8N1E2 194 aa12.18□□□□□ -0.46
CCNF-201ENST00000293968 SPRR3Q9UBC9 169 aa12.18□□□□□ -0.46
CCNF-201ENST00000293968 CA2P00918 260 aa12.18□□□□□ -0.46
CCNF-201ENST00000293968 Q8N7P7 452 aa12.18□□□□□ -0.46
CCNF-201ENST00000293968 BORCS7Q96B45 105 aa12.18□□□□□ -0.46
CCNF-201ENST00000293968 RBM14Q96PK6 669 aaKnown RBP12.18□□□□□ -0.46
CCNF-201ENST00000293968 C9orf172C9J069 976 aa12.17□□□□□ -0.46
CCNF-201ENST00000293968 ADH4P08319 380 aa12.17□□□□□ -0.46
CCNF-201ENST00000293968 MOB3BQ86TA1 216 aa12.17□□□□□ -0.46
CCNF-201ENST00000293968 RAB7AP51149 207 aa12.17□□□□□ -0.46
CCNF-201ENST00000293968 CD177Q8N6Q3 437 aa12.17□□□□□ -0.46
CCNF-201ENST00000293968 TCTEX1D1Q8N7M0 179 aa12.17□□□□□ -0.46
CCNF-201ENST00000293968 NRN1Q9NPD7 142 aa12.17□□□□□ -0.46
CCNF-201ENST00000293968 SLC35D1Q9NTN3 355 aa12.17□□□□□ -0.46
CCNF-201ENST00000293968 ZNF766Q5HY98 468 aa12.17□□□□□ -0.46
CCNF-201ENST00000293968 TIMM8BQ9Y5J9 83 aaPredicted RBP12.17□□□□□ -0.46
CCNF-201ENST00000293968 LGALS4P56470 323 aa12.16□□□□□ -0.46
CCNF-201ENST00000293968 RNFT1Q5M7Z0 435 aa12.16□□□□□ -0.46
CCNF-201ENST00000293968 FAM201AQ5SY85 155 aa12.16□□□□□ -0.46
CCNF-201ENST00000293968 TXNDC17Q9BRA2 123 aa12.16□□□□□ -0.46
CCNF-201ENST00000293968 RPH3ALQ9UNE2 315 aa12.16□□□□□ -0.46
CCNF-201ENST00000293968 COL5A1-AS1Q5SY13 56 aa12.16□□□□□ -0.46
CCNF-201ENST00000293968 Q8TCH9 128 aa12.16□□□□□ -0.46
CCNF-201ENST00000293968 ZNF331Q9NQX6 463 aaPredicted RBP12.16□□□□□ -0.46
CCNF-201ENST00000293968 A0A1B0GWJ7 208 aa12.16□□□□□ -0.46
CCNF-201ENST00000293968 ZNF718Q3SXZ3 478 aa12.16□□□□□ -0.46
CCNF-201ENST00000293968 C11orf53Q8IXP5 236 aa12.16□□□□□ -0.46
CCNF-201ENST00000293968 CLCF1Q9UBD9 225 aa12.16□□□□□ -0.46
CCNF-201ENST00000293968 CHRNB4P30926 498 aa12.15□□□□□ -0.46
CCNF-201ENST00000293968 MORN2Q502X0 79 aa12.15□□□□□ -0.46
CCNF-201ENST00000293968 PPP1R35Q8TAP8 253 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms