RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 WDR25Q64LD2 544 aaPredicted RBP10.79□□□□□ -0.68
PTCD1-201ENST00000292478 YPEL2Q96QA6 119 aa10.79□□□□□ -0.68
PTCD1-201ENST00000292478 A0A087WWC5 75 aa10.79□□□□□ -0.68
PTCD1-201ENST00000292478 TRAV14DV4A0A0A6YYC5 116 aa10.79□□□□□ -0.68
PTCD1-201ENST00000292478 C17orf98A8MV24 154 aa10.79□□□□□ -0.68
PTCD1-201ENST00000292478 C12orf54Q6X4T0 127 aa10.79□□□□□ -0.68
PTCD1-201ENST00000292478 LINC00305Q7Z4B0 112 aa10.79□□□□□ -0.68
PTCD1-201ENST00000292478 UQCR10Q9UDW1 63 aa10.79□□□□□ -0.68
PTCD1-201ENST00000292478 GAS1P54826 345 aa10.79□□□□□ -0.68
PTCD1-201ENST00000292478 ZNF837Q96EG3 531 aaPredicted RBP10.79□□□□□ -0.68
PTCD1-201ENST00000292478 SIP14410 1827 aa10.79□□□□□ -0.68
PTCD1-201ENST00000292478 A0A0B4J293 547 aa10.79□□□□□ -0.68
PTCD1-201ENST00000292478 ATP5J2P56134 94 aa10.79□□□□□ -0.68
PTCD1-201ENST00000292478 SPATA45Q537H7 98 aa10.79□□□□□ -0.68
PTCD1-201ENST00000292478 FAM53AQ6NSI3 398 aaPredicted RBP10.79□□□□□ -0.68
PTCD1-201ENST00000292478 IGKV3D-15A0A087WSY6 115 aa10.78□□□□□ -0.68
PTCD1-201ENST00000292478 GDF9O60383 454 aa10.78□□□□□ -0.68
PTCD1-201ENST00000292478 OR10AG1Q8NH19 301 aa10.78□□□□□ -0.68
PTCD1-201ENST00000292478 LYZL4Q96KX0 146 aa10.78□□□□□ -0.68
PTCD1-201ENST00000292478 PHLDA3Q9Y5J5 127 aa10.78□□□□□ -0.68
PTCD1-201ENST00000292478 REG1AP05451 166 aa10.78□□□□□ -0.68
PTCD1-201ENST00000292478 SRP19P09132 144 aaKnown RBP10.78□□□□□ -0.68
PTCD1-201ENST00000292478 CENPWQ5EE01 88 aa10.78□□□□□ -0.68
PTCD1-201ENST00000292478 C17orf100A8MU93 164 aa10.78□□□□□ -0.68
PTCD1-201ENST00000292478 M0R3E3 92 aa10.78□□□□□ -0.68
PTCD1-201ENST00000292478 SOX21Q9Y651 276 aaPredicted RBP10.78□□□□□ -0.68
PTCD1-201ENST00000292478 C9orf172C9J069 976 aa10.78□□□□□ -0.68
PTCD1-201ENST00000292478 SIAH2O43255 324 aa10.78□□□□□ -0.68
PTCD1-201ENST00000292478 ZNF207O43670 478 aaKnown RBP10.78□□□□□ -0.68
PTCD1-201ENST00000292478 ZNF25P17030 456 aaPredicted RBP10.78□□□□□ -0.68
PTCD1-201ENST00000292478 ERASQ7Z444 233 aa10.78□□□□□ -0.68
PTCD1-201ENST00000292478 C9orf106Q8NAJ2 232 aa10.78□□□□□ -0.68
PTCD1-201ENST00000292478 RAX2Q96IS3 184 aa10.78□□□□□ -0.68
PTCD1-201ENST00000292478 CHD5Q8TDI0 1954 aa10.77□□□□□ -0.68
PTCD1-201ENST00000292478 TRPM7Q96QT4 1865 aa10.77□□□□□ -0.68
PTCD1-201ENST00000292478 FAM90A9PA6NNJ1 464 aa10.77□□□□□ -0.68
PTCD1-201ENST00000292478 SIGLEC5O15389 551 aa10.77□□□□□ -0.68
PTCD1-201ENST00000292478 BTF3P20290 206 aaKnown RBP10.77□□□□□ -0.68
PTCD1-201ENST00000292478 SRIP30626 198 aa10.77□□□□□ -0.68
PTCD1-201ENST00000292478 DDB2Q92466 427 aa10.77□□□□□ -0.68
PTCD1-201ENST00000292478 PMCHL2Q9BQD1 86 aa10.77□□□□□ -0.68
PTCD1-201ENST00000292478 SSBP3Q9BWW4 388 aaPredicted RBP10.77□□□□□ -0.68
PTCD1-201ENST00000292478 IGKV1-9A0A0C4DH69 117 aa10.77□□□□□ -0.69
PTCD1-201ENST00000292478 FBLL1A6NHQ2 334 aaKnown RBP10.77□□□□□ -0.69
PTCD1-201ENST00000292478 IL4P05112 153 aa10.77□□□□□ -0.69
PTCD1-201ENST00000292478 NMUP48645 174 aa10.77□□□□□ -0.69
PTCD1-201ENST00000292478 HBBP68871 147 aa10.77□□□□□ -0.69
PTCD1-201ENST00000292478 SMUG1Q53HV7 270 aa10.77□□□□□ -0.69
PTCD1-201ENST00000292478 ZNF497Q6ZNH5 498 aa10.77□□□□□ -0.69
PTCD1-201ENST00000292478 ZNF525Q8N782 197 aa10.77□□□□□ -0.69
PTCD1-201ENST00000292478 LINC01560Q8TB33 94 aa10.77□□□□□ -0.69
PTCD1-201ENST00000292478 RBFOX2O43251 390 aaKnown RBP eCLIP10.77□□□□□ -0.69
PTCD1-201ENST00000292478 RPL24P83731 157 aaKnown RBP10.77□□□□□ -0.69
PTCD1-201ENST00000292478 BSPH1Q075Z2 132 aa10.77□□□□□ -0.69
PTCD1-201ENST00000292478 CLDND2Q8NHS1 167 aa10.77□□□□□ -0.69
PTCD1-201ENST00000292478 CCL19Q99731 98 aa10.77□□□□□ -0.69
PTCD1-201ENST00000292478 ARID1AO14497 2285 aa10.77□□□□□ -0.69
PTCD1-201ENST00000292478 CRXO43186 299 aaPredicted RBP10.77□□□□□ -0.69
PTCD1-201ENST00000292478 SNRPCP09234 159 aaKnown RBP10.77□□□□□ -0.69
PTCD1-201ENST00000292478 UQCRFS1P47985 274 aa10.77□□□□□ -0.69
PTCD1-201ENST00000292478 IL36BQ9NZH7 164 aa10.77□□□□□ -0.69
PTCD1-201ENST00000292478 OR4C46A6NHA9 309 aa10.76□□□□□ -0.69
PTCD1-201ENST00000292478 OR1N2Q8NGR9 330 aa10.76□□□□□ -0.69
PTCD1-201ENST00000292478 CRYGSP22914 178 aa10.76□□□□□ -0.69
PTCD1-201ENST00000292478 GOLT1AQ6ZVE7 132 aa10.76□□□□□ -0.69
PTCD1-201ENST00000292478 PLPPR1Q8TBJ4 325 aa10.76□□□□□ -0.69
PTCD1-201ENST00000292478 CABIN1Q9Y6J0 2220 aa10.76□□□□□ -0.69
PTCD1-201ENST00000292478 PROB1E7EW31 1015 aa10.76□□□□□ -0.69
PTCD1-201ENST00000292478 HLA-DRB1P01911 266 aa10.76□□□□□ -0.69
PTCD1-201ENST00000292478 NBEAP1P0C6P0 100 aa10.76□□□□□ -0.69
PTCD1-201ENST00000292478 TMEM183AQ8IXX5 376 aa10.76□□□□□ -0.69
PTCD1-201ENST00000292478 TMEM105Q8N8V8 129 aa10.76□□□□□ -0.69
PTCD1-201ENST00000292478 OR10S1Q8NGN2 331 aa10.76□□□□□ -0.69
PTCD1-201ENST00000292478 EAF1Q96JC9 268 aaPredicted RBP10.76□□□□□ -0.69
PTCD1-201ENST00000292478 A0A1B0GW15 77 aa10.76□□□□□ -0.69
PTCD1-201ENST00000292478 F8VVB4 439 aa10.76□□□□□ -0.69
PTCD1-201ENST00000292478 F8VWA3 439 aa10.76□□□□□ -0.69
PTCD1-201ENST00000292478 DLX6P56179 175 aa10.76□□□□□ -0.69
PTCD1-201ENST00000292478 ZNF385CQ66K41 422 aaPredicted RBP10.76□□□□□ -0.69
PTCD1-201ENST00000292478 FAM216BQ8N7L0 139 aa10.76□□□□□ -0.69
PTCD1-201ENST00000292478 TET1Q8NFU7 2136 aa10.76□□□□□ -0.69
PTCD1-201ENST00000292478 ZMAT5Q9UDW3 170 aaKnown RBP10.76□□□□□ -0.69
PTCD1-201ENST00000292478 GREB1Q4ZG55 1949 aa10.76□□□□□ -0.69
PTCD1-201ENST00000292478 RRHO14718 337 aa10.76□□□□□ -0.69
PTCD1-201ENST00000292478 RNF126Q9BV68 326 aa10.76□□□□□ -0.69
PTCD1-201ENST00000292478 TUBA4BQ9H853 241 aa10.76□□□□□ -0.69
PTCD1-201ENST00000292478 DMRT1Q9Y5R6 373 aa10.76□□□□□ -0.69
PTCD1-201ENST00000292478 PRR32B1ATL7 298 aa10.75□□□□□ -0.69
PTCD1-201ENST00000292478 NUDT3O95989 172 aa10.75□□□□□ -0.69
PTCD1-201ENST00000292478 GPX1P07203 203 aa10.75□□□□□ -0.69
PTCD1-201ENST00000292478 TAS2R60P59551 318 aa10.75□□□□□ -0.69
PTCD1-201ENST00000292478 LRTM2Q8N967 370 aa10.75□□□□□ -0.69
PTCD1-201ENST00000292478 FMC1Q96HJ9 113 aa10.75□□□□□ -0.69
PTCD1-201ENST00000292478 RTN4RQ9BZR6 473 aa10.75□□□□□ -0.69
PTCD1-201ENST00000292478 TDRD6O60522 2096 aaKnown RBP10.75□□□□□ -0.69
PTCD1-201ENST00000292478 TFPI2P48307 235 aa10.75□□□□□ -0.69
PTCD1-201ENST00000292478 LINC00518Q8N0U6 118 aa10.75□□□□□ -0.69
PTCD1-201ENST00000292478 FAM131CQ96AQ9 280 aa10.75□□□□□ -0.69
PTCD1-201ENST00000292478 SNRPD3P62318 126 aaKnown RBP10.75□□□□□ -0.69
PTCD1-201ENST00000292478 RSPO4Q2I0M5 234 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms