RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 LINC00869P0C866 280 aa9.65□□□□□ -0.87
NPC1L1-201ENST00000289547 C1orf194Q5T5A4 169 aa9.65□□□□□ -0.87
NPC1L1-201ENST00000289547 FGFRL1Q8N441 504 aa9.65□□□□□ -0.87
NPC1L1-201ENST00000289547 A0A0U1RQV5 110 aa9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 TMPRSS2O15393 492 aa9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 CD40P25942 277 aa9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 NPBWR2P48146 333 aa9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 ZBTB34Q8NCN2 500 aa9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 NEU4Q8WWR8 484 aaPredicted RBP9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 TMEM54Q969K7 222 aa9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 RPEQ96AT9 228 aa9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 SLC25A33Q9BSK2 321 aa9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 ZNF318Q5VUA4 2279 aa9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 IGKV1D-42A0A075B6H8 117 aa9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 IGHMP01871 453 aa9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 ZNF735P0CB33 412 aa9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 LYZP61626 148 aa9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 NRN1LQ496H8 165 aa9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 TCF23Q7RTU1 214 aa9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 ZNF488Q96MN9 340 aa9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 TRBV24-1A0A075B6N3 115 aa9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 OR2T8A6NH00 312 aa9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 J3QT63 122 aa9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 CDIPTO14735 213 aa9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 DNLZQ5SXM8 178 aa9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 SSBP3Q9BWW4 388 aaPredicted RBP9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 PRDM14Q9GZV8 571 aa9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 SPRR3Q9UBC9 169 aa9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 K7N7A8 449 aa9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 TNFSF13O75888 250 aa9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 KIR2DS2P43631 304 aa9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 FOXA3P55318 350 aaPredicted RBP9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 TTC32Q5I0X7 151 aa9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 C10orf113Q5VZT2 155 aa9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 ARHGEF17Q96PE2 2063 aaPredicted RBP9.64□□□□□ -0.87
NPC1L1-201ENST00000289547 MRPS11P82912 194 aaKnown RBP9.63□□□□□ -0.87
NPC1L1-201ENST00000289547 SPSB4Q96A44 273 aa9.63□□□□□ -0.87
NPC1L1-201ENST00000289547 KCNS1Q96KK3 526 aa9.63□□□□□ -0.87
NPC1L1-201ENST00000289547 UFC1Q9Y3C8 167 aa9.63□□□□□ -0.87
NPC1L1-201ENST00000289547 MUC6Q6W4X9 2439 aa9.63□□□□□ -0.87
NPC1L1-201ENST00000289547 C10orf128Q5T292 105 aa9.63□□□□□ -0.87
NPC1L1-201ENST00000289547 DOLPP1Q86YN1 238 aa9.63□□□□□ -0.87
NPC1L1-201ENST00000289547 Q96M66 194 aa9.63□□□□□ -0.87
NPC1L1-201ENST00000289547 GFI1Q99684 422 aa9.63□□□□□ -0.87
NPC1L1-201ENST00000289547 OOEPA6NGQ2 149 aa9.63□□□□□ -0.87
NPC1L1-201ENST00000289547 ZNF785A8K8V0 405 aa9.63□□□□□ -0.87
NPC1L1-201ENST00000289547 ARF6P62330 175 aa9.63□□□□□ -0.87
NPC1L1-201ENST00000289547 CCL8P80075 99 aa9.63□□□□□ -0.87
NPC1L1-201ENST00000289547 SNAI3Q3KNW1 292 aa9.63□□□□□ -0.87
NPC1L1-201ENST00000289547 ZNF818PQ6ZRF7 136 aa9.63□□□□□ -0.87
NPC1L1-201ENST00000289547 TMEM136Q6ZRR5 245 aa9.63□□□□□ -0.87
NPC1L1-201ENST00000289547 SPCS1Q9Y6A9 102 aa9.63□□□□□ -0.87
NPC1L1-201ENST00000289547 SMIM17P0DL12 118 aa9.63□□□□□ -0.87
NPC1L1-201ENST00000289547 RPL31P62899 125 aaKnown RBP9.63□□□□□ -0.87
NPC1L1-201ENST00000289547 UNQ5815/PRO19632Q6UWF5 114 aa9.63□□□□□ -0.87
NPC1L1-201ENST00000289547 PAXXQ9BUH6 204 aa9.63□□□□□ -0.87
NPC1L1-201ENST00000289547 AP5S1Q9NUS5 200 aa9.63□□□□□ -0.87
NPC1L1-201ENST00000289547 PINLYPA6NC86 204 aa9.62□□□□□ -0.87
NPC1L1-201ENST00000289547 IL36BQ9NZH7 164 aa9.62□□□□□ -0.87
NPC1L1-201ENST00000289547 CA11O75493 328 aa9.62□□□□□ -0.87
NPC1L1-201ENST00000289547 GLRXP35754 106 aa9.62□□□□□ -0.87
NPC1L1-201ENST00000289547 MOB3BQ86TA1 216 aa9.62□□□□□ -0.87
NPC1L1-201ENST00000289547 IGHG3P01860 377 aa9.62□□□□□ -0.87
NPC1L1-201ENST00000289547 GFRA1P56159 465 aa9.62□□□□□ -0.87
NPC1L1-201ENST00000289547 MYOZ3Q8TDC0 251 aa9.62□□□□□ -0.87
NPC1L1-201ENST00000289547 PMCHL2Q9BQD1 86 aa9.62□□□□□ -0.87
NPC1L1-201ENST00000289547 LHFPL6Q9Y693 200 aa9.62□□□□□ -0.87
NPC1L1-201ENST00000289547 TTC28Q96AY4 2481 aa9.62□□□□□ -0.87
NPC1L1-201ENST00000289547 ZNF324BQ6AW86 544 aaPredicted RBP9.62□□□□□ -0.87
NPC1L1-201ENST00000289547 C1QL2Q7Z5L3 287 aa9.62□□□□□ -0.87
NPC1L1-201ENST00000289547 STXBP6Q8NFX7 210 aa9.62□□□□□ -0.87
NPC1L1-201ENST00000289547 WBP1Q96G27 269 aa9.62□□□□□ -0.87
NPC1L1-201ENST00000289547 PGLYRP4Q96LB8 373 aa9.62□□□□□ -0.87
NPC1L1-201ENST00000289547 SPTBN2O15020 2390 aa9.61□□□□□ -0.87
NPC1L1-201ENST00000289547 A8MWP6 167 aa9.61□□□□□ -0.87
NPC1L1-201ENST00000289547 H3BUT2 72 aa9.61□□□□□ -0.87
NPC1L1-201ENST00000289547 J3QRE1 110 aa9.61□□□□□ -0.87
NPC1L1-201ENST00000289547 GZMBP10144 247 aa9.61□□□□□ -0.87
NPC1L1-201ENST00000289547 ADMP35318 185 aa9.61□□□□□ -0.87
NPC1L1-201ENST00000289547 LSM10Q969L4 123 aaKnown RBP9.61□□□□□ -0.87
NPC1L1-201ENST00000289547 FAM90A26D6RGX4 464 aa9.61□□□□□ -0.87
NPC1L1-201ENST00000289547 SMIM13P0DJ93 91 aa9.61□□□□□ -0.87
NPC1L1-201ENST00000289547 TDGF1P3P51864 188 aa9.61□□□□□ -0.87
NPC1L1-201ENST00000289547 CENPWQ5EE01 88 aa9.61□□□□□ -0.87
NPC1L1-201ENST00000289547 HIST1H4GQ99525 98 aa9.61□□□□□ -0.87
NPC1L1-201ENST00000289547 HSPB7Q9UBY9 170 aa9.61□□□□□ -0.87
NPC1L1-201ENST00000289547 ACACAQ13085 2346 aa9.61□□□□□ -0.87
NPC1L1-201ENST00000289547 BSPH1Q075Z2 132 aa9.61□□□□□ -0.87
NPC1L1-201ENST00000289547 GBGT1Q8N5D6 347 aa9.61□□□□□ -0.87
NPC1L1-201ENST00000289547 ALPK3Q96L96 1907 aa9.61□□□□□ -0.87
NPC1L1-201ENST00000289547 ORM1P02763 201 aa9.61□□□□□ -0.87
NPC1L1-201ENST00000289547 NUDT10Q8NFP7 164 aa9.61□□□□□ -0.87
NPC1L1-201ENST00000289547 OR10AG1Q8NH19 301 aa9.61□□□□□ -0.87
NPC1L1-201ENST00000289547 LPAR2Q9HBW0 351 aa9.61□□□□□ -0.87
NPC1L1-201ENST00000289547 WFDC1Q9HC57 220 aa9.61□□□□□ -0.87
NPC1L1-201ENST00000289547 TRBV6-7A0A0A0MS04 114 aa9.6□□□□□ -0.87
NPC1L1-201ENST00000289547 J3QR06 171 aa9.6□□□□□ -0.87
NPC1L1-201ENST00000289547 COX7A1P24310 79 aa9.6□□□□□ -0.87
NPC1L1-201ENST00000289547 FGF12P61328 243 aa9.6□□□□□ -0.87
NPC1L1-201ENST00000289547 PERPQ96FX8 193 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms