RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 SMLR1H3BR10 107 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 ZNF207O43670 478 aaKnown RBP6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 CHST1O43916 411 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 NDUFS7O75251 213 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 FCN3O75636 299 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 LIPFP07098 398 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 SLC6A1P30531 599 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 BTCP35070 178 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 GLIPR1P48060 266 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 LOXL1Q08397 574 aaPredicted RBP6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 FCN2Q15485 313 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 BAGE3Q86Y29 109 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 BAGE2Q86Y30 109 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 FAM219AQ8IW50 185 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 BPESC1Q9GZL8 116 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 BOLA1Q9Y3E2 137 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 A0A096LNT2 108 aa6.93□□□□□ -1.3
PTPDC1-201ENST00000288976 SLC25A5P05141 298 aaKnown RBP6.93□□□□□ -1.3
PTPDC1-201ENST00000288976 SULT1A3P0DMM9 295 aa6.93□□□□□ -1.3
PTPDC1-201ENST00000288976 SULT1A4P0DMN0 295 aa6.93□□□□□ -1.3
PTPDC1-201ENST00000288976 UCP3P55916 312 aa6.93□□□□□ -1.3
PTPDC1-201ENST00000288976 LHFPL1Q86WI0 220 aa6.93□□□□□ -1.3
PTPDC1-201ENST00000288976 H1FOOQ8IZA3 346 aaPredicted RBP6.93□□□□□ -1.3
PTPDC1-201ENST00000288976 OR13A1Q8NGR1 328 aa6.93□□□□□ -1.3
PTPDC1-201ENST00000288976 CLDND2Q8NHS1 167 aa6.93□□□□□ -1.3
PTPDC1-201ENST00000288976 ZNF486Q96H40 463 aaPredicted RBP6.93□□□□□ -1.3
PTPDC1-201ENST00000288976 C11orf54Q9H0W9 315 aaPredicted RBP6.93□□□□□ -1.3
PTPDC1-201ENST00000288976 GOLT1BQ9Y3E0 138 aa6.93□□□□□ -1.3
PTPDC1-201ENST00000288976 BAHCC1Q9P281 2608 aa6.93□□□□□ -1.3
PTPDC1-201ENST00000288976 FBP1P09467 338 aa6.93□□□□□ -1.3
PTPDC1-201ENST00000288976 AKR1C3P42330 323 aa6.93□□□□□ -1.3
PTPDC1-201ENST00000288976 RAG2P55895 527 aa6.93□□□□□ -1.3
PTPDC1-201ENST00000288976 LMO4P61968 165 aa6.93□□□□□ -1.3
PTPDC1-201ENST00000288976 C17orf58Q2M2W7 97 aa6.93□□□□□ -1.3
PTPDC1-201ENST00000288976 DUX4L9Q6RFH8 374 aaPredicted RBP6.93□□□□□ -1.3
PTPDC1-201ENST00000288976 Q8WTZ3 238 aa6.93□□□□□ -1.3
PTPDC1-201ENST00000288976 CALYQ9NYX4 217 aa6.93□□□□□ -1.3
PTPDC1-201ENST00000288976 IDI2-AS1Q9NZ38 188 aa6.93□□□□□ -1.3
PTPDC1-201ENST00000288976 C12orf77C9JDV5 145 aa6.93□□□□□ -1.3
PTPDC1-201ENST00000288976 TMEM41BQ5BJD5 291 aa6.93□□□□□ -1.3
PTPDC1-201ENST00000288976 ZDHHC22Q8N966 263 aa6.93□□□□□ -1.3
PTPDC1-201ENST00000288976 RANGRFQ9HD47 186 aaPredicted RBP6.93□□□□□ -1.3
PTPDC1-201ENST00000288976 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.93□□□□□ -1.3
PTPDC1-201ENST00000288976 DSCAMO60469 2012 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 RNASEK-C17orf49H0YIS7 233 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 HBE1P02100 147 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 TFF1P04155 84 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 PAX2Q02962 417 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 OXA1LQ15070 435 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 PEA15Q15121 130 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 RPEL1Q2QD12 228 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 TMEM200BQ69YZ2 307 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 ZNF660Q6AZW8 331 aaPredicted RBP6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 C20orf85Q9H1P6 137 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 DPH3P1Q9H4G8 78 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 RPUSD1Q9UJJ7 312 aaKnown RBP6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 YPEL1O60688 119 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 HBZP02008 142 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 GAPDHP04406 335 aaKnown RBP6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 USF1P22415 310 aaPredicted RBP6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 G6PCP35575 357 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 TOR2AQ5JU69 321 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 KRTAP1-3Q8IUG1 177 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 TNFRSF14Q92956 283 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 RHOVQ96L33 236 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 YPEL2Q96QA6 119 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 GAB2Q9UQC2 676 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 KPTNQ9Y664 436 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 IGKV1D-8A0A087WSZ0 117 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 ORM1P02763 201 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 GATA3P23771 443 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 HERPUD1Q15011 391 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 TM4SF20Q53R12 229 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 Q5PR19 223 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 HEPN1Q6WQI6 88 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 TERB2Q8NHR7 220 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 NRGNQ92686 78 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 GPHA2Q96T91 129 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 IGHV4-30-2A0A087WSY4 118 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 IGHV2-70DA0A0C4DH43 119 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 A0A0D9SG52 128 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 NDUFB6O95139 128 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 SPP1P10451 314 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 SELLP14151 372 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 FAM71F2Q6NXP2 309 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 SLC38A6Q8IZM9 456 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 CADM3Q8N126 398 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 KCNRGQ8N5I3 272 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 NEURL2Q9BR09 285 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 NIPSNAP3BQ9BS92 247 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 BIN3Q9NQY0 253 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 PRR13Q9NZ81 148 aa6.92□□□□□ -1.3
PTPDC1-201ENST00000288976 FLNCQ14315 2725 aa6.91□□□□□ -1.3
PTPDC1-201ENST00000288976 ABHD12Q8N2K0 398 aa6.91□□□□□ -1.3
PTPDC1-201ENST00000288976 LINC00311Q8N616 119 aa6.91□□□□□ -1.3
PTPDC1-201ENST00000288976 METTL1Q9UBP6 276 aaKnown RBP6.91□□□□□ -1.3
PTPDC1-201ENST00000288976 IGKV1-6A0A0C4DH72 117 aa6.91□□□□□ -1.3
PTPDC1-201ENST00000288976 RCC1P18754 421 aaPredicted RBP6.91□□□□□ -1.3
PTPDC1-201ENST00000288976 RPL27AP46776 148 aaKnown RBP6.91□□□□□ -1.3
PTPDC1-201ENST00000288976 ZNF273Q14593 569 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms