RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 RBPMS2Q6ZRY4 209 aaKnown RBP10.59□□□□□ -0.71
TPM1-202ENST00000288398 CD300LFQ8TDQ1 290 aa10.59□□□□□ -0.71
TPM1-202ENST00000288398 CACNG8Q8WXS5 425 aa10.59□□□□□ -0.71
TPM1-202ENST00000288398 IFT46Q9NQC8 304 aa10.59□□□□□ -0.71
TPM1-202ENST00000288398 DYNC2H1Q8NCM8 4307 aaKnown RBP10.58□□□□□ -0.72
TPM1-202ENST00000288398 A0A0A6YYH2 397 aa10.58□□□□□ -0.72
TPM1-202ENST00000288398 A6NJ64 397 aa10.58□□□□□ -0.72
TPM1-202ENST00000288398 SULT1C2O00338 296 aa10.58□□□□□ -0.72
TPM1-202ENST00000288398 RBFOX2O43251 390 aaKnown RBP eCLIP10.58□□□□□ -0.72
TPM1-202ENST00000288398 SCAF4O95104 1147 aaKnown RBP10.58□□□□□ -0.72
TPM1-202ENST00000288398 HPRT1P00492 218 aa10.58□□□□□ -0.72
TPM1-202ENST00000288398 PPYP01298 95 aa10.58□□□□□ -0.72
TPM1-202ENST00000288398 NQO2P16083 231 aa10.58□□□□□ -0.72
TPM1-202ENST00000288398 CTRB1P17538 263 aa10.58□□□□□ -0.72
TPM1-202ENST00000288398 CBX5P45973 191 aa10.58□□□□□ -0.72
TPM1-202ENST00000288398 TAS2R31P59538 309 aa10.58□□□□□ -0.72
TPM1-202ENST00000288398 AADACL3Q5VUY0 350 aa10.58□□□□□ -0.72
TPM1-202ENST00000288398 CTRB2Q6GPI1 263 aa10.58□□□□□ -0.72
TPM1-202ENST00000288398 PLET1Q6UQ28 207 aa10.58□□□□□ -0.72
TPM1-202ENST00000288398 LINC00322Q6ZN03 302 aaPredicted RBP10.58□□□□□ -0.72
TPM1-202ENST00000288398 TMEM17Q86X19 198 aa10.58□□□□□ -0.72
TPM1-202ENST00000288398 HOGA1Q86XE5 327 aa10.58□□□□□ -0.72
TPM1-202ENST00000288398 UXS1Q8NBZ7 420 aa10.58□□□□□ -0.72
TPM1-202ENST00000288398 MARC2Q969Z3 335 aa10.58□□□□□ -0.72
TPM1-202ENST00000288398 CCDC140Q96MF4 163 aa10.58□□□□□ -0.72
TPM1-202ENST00000288398 FANCD2OSQ96PS1 177 aa10.58□□□□□ -0.72
TPM1-202ENST00000288398 GPHA2Q96T91 129 aa10.58□□□□□ -0.72
TPM1-202ENST00000288398 GGTLC1Q9BX51 225 aa10.58□□□□□ -0.72
TPM1-202ENST00000288398 YTHDF1Q9BYJ9 559 aaKnown RBP10.58□□□□□ -0.72
TPM1-202ENST00000288398 WFDC10AQ9H1F0 79 aa10.58□□□□□ -0.72
TPM1-202ENST00000288398 UFC1Q9Y3C8 167 aa10.58□□□□□ -0.72
TPM1-202ENST00000288398 RBMY1BA6NDE4 496 aaKnown RBP10.57□□□□□ -0.72
TPM1-202ENST00000288398 RBMY1EA6NEQ0 496 aaKnown RBP10.57□□□□□ -0.72
TPM1-202ENST00000288398 A8MWP6 167 aa10.57□□□□□ -0.72
TPM1-202ENST00000288398 E7EUB6 86 aa10.57□□□□□ -0.72
TPM1-202ENST00000288398 CLEC3BP05452 202 aa10.57□□□□□ -0.72
TPM1-202ENST00000288398 FCER2P06734 321 aa10.57□□□□□ -0.72
TPM1-202ENST00000288398 RBMY1DP0C7P1 496 aaKnown RBP10.57□□□□□ -0.72
TPM1-202ENST00000288398 GPR183P32249 361 aa10.57□□□□□ -0.72
TPM1-202ENST00000288398 EIF4EBP1Q13541 118 aaPredicted RBP10.57□□□□□ -0.72
TPM1-202ENST00000288398 BTNL8Q6UX41 500 aa10.57□□□□□ -0.72
TPM1-202ENST00000288398 SLC38A6Q8IZM9 456 aa10.57□□□□□ -0.72
TPM1-202ENST00000288398 TMEM61Q8N0U2 210 aa10.57□□□□□ -0.72
TPM1-202ENST00000288398 GVQW1Q8N7I0 195 aa10.57□□□□□ -0.72
TPM1-202ENST00000288398 TSPAN14Q8NG11 270 aa10.57□□□□□ -0.72
TPM1-202ENST00000288398 OR51H1Q8NH63 302 aa10.57□□□□□ -0.72
TPM1-202ENST00000288398 SRSF8Q9BRL6 282 aaKnown RBP10.57□□□□□ -0.72
TPM1-202ENST00000288398 SELENOKQ9Y6D0 94 aa10.57□□□□□ -0.72
TPM1-202ENST00000288398 IGLV11-55A0A075B6I3 123 aa10.56□□□□□ -0.72
TPM1-202ENST00000288398 LOC102724200A0A096LPH7 203 aaPredicted RBP10.56□□□□□ -0.72
TPM1-202ENST00000288398 TRAV25A0A0B4J276 109 aa10.56□□□□□ -0.72
TPM1-202ENST00000288398 TMEM213A2RRL7 107 aa10.56□□□□□ -0.72
TPM1-202ENST00000288398 MYOD1P15172 320 aa10.56□□□□□ -0.72
TPM1-202ENST00000288398 EDN2P20800 178 aa10.56□□□□□ -0.72
TPM1-202ENST00000288398 OR2B8PP59922 312 aa10.56□□□□□ -0.72
TPM1-202ENST00000288398 ZNF585BQ52M93 769 aa10.56□□□□□ -0.72
TPM1-202ENST00000288398 THOC7Q6I9Y2 204 aaKnown RBP10.56□□□□□ -0.72
TPM1-202ENST00000288398 ZNF773Q6PK81 442 aa10.56□□□□□ -0.72
TPM1-202ENST00000288398 HSD17B13Q7Z5P4 300 aaPredicted RBP10.56□□□□□ -0.72
TPM1-202ENST00000288398 OR1L6Q8NGR2 347 aa10.56□□□□□ -0.72
TPM1-202ENST00000288398 QTRT1Q9BXR0 403 aaKnown RBP10.56□□□□□ -0.72
TPM1-202ENST00000288398 TMEM140Q9NV12 185 aa10.56□□□□□ -0.72
TPM1-202ENST00000288398 MLXQ9UH92 298 aa10.56□□□□□ -0.72
TPM1-202ENST00000288398 DMRT1Q9Y5R6 373 aa10.56□□□□□ -0.72
TPM1-202ENST00000288398 MFSD2BA6NFX1 497 aa10.55□□□□□ -0.72
TPM1-202ENST00000288398 UPK2O00526 184 aa10.55□□□□□ -0.72
TPM1-202ENST00000288398 CLEC2LP0C7M8 214 aa10.55□□□□□ -0.72
TPM1-202ENST00000288398 PTHLHP12272 177 aa10.55□□□□□ -0.72
TPM1-202ENST00000288398 BRWD1-AS2P59051 145 aa10.55□□□□□ -0.72
TPM1-202ENST00000288398 TM4SF20Q53R12 229 aa10.55□□□□□ -0.72
TPM1-202ENST00000288398 OR5AP2Q8NGF4 316 aa10.55□□□□□ -0.72
TPM1-202ENST00000288398 OR5H6Q8NGV6 325 aa10.55□□□□□ -0.72
TPM1-202ENST00000288398 S100A16Q96FQ6 103 aaKnown RBP10.55□□□□□ -0.72
TPM1-202ENST00000288398 HINT2Q9BX68 163 aa10.55□□□□□ -0.72
TPM1-202ENST00000288398 AUNIPQ9H7T9 357 aa10.55□□□□□ -0.72
TPM1-202ENST00000288398 PLEKHA2Q9HB19 425 aa10.55□□□□□ -0.72
TPM1-202ENST00000288398 EHFQ9NZC4 300 aa10.55□□□□□ -0.72
TPM1-202ENST00000288398 COMMD9Q9P000 198 aa10.55□□□□□ -0.72
TPM1-202ENST00000288398 MRPL27Q9P0M9 148 aaKnown RBP10.55□□□□□ -0.72
TPM1-202ENST00000288398 RYR2Q92736 4967 aa10.55□□□□□ -0.72
TPM1-202ENST00000288398 A0A1B0GW64 132 aa10.54□□□□□ -0.72
TPM1-202ENST00000288398 TMEM127O75204 238 aa10.54□□□□□ -0.72
TPM1-202ENST00000288398 SNAPC5O75971 98 aa10.54□□□□□ -0.72
TPM1-202ENST00000288398 S1PR2O95136 353 aa10.54□□□□□ -0.72
TPM1-202ENST00000288398 ATP6V1G2O95670 118 aa10.54□□□□□ -0.72
TPM1-202ENST00000288398 TRAPPC2P0DI81 140 aa10.54□□□□□ -0.72
TPM1-202ENST00000288398 TRAPPC2BP0DI82 140 aa10.54□□□□□ -0.72
TPM1-202ENST00000288398 RPA2P15927 270 aa10.54□□□□□ -0.72
TPM1-202ENST00000288398 PTBP1P26599 531 aaKnown RBP eCLIP10.54□□□□□ -0.727e-7■■■□□ 17
TPM1-202ENST00000288398 S100GP29377 79 aa10.54□□□□□ -0.72
TPM1-202ENST00000288398 APOC4P55056 127 aa10.54□□□□□ -0.72
TPM1-202ENST00000288398 ELLP55199 621 aaPredicted RBP10.54□□□□□ -0.72
TPM1-202ENST00000288398 NEDD8Q15843 81 aa10.54□□□□□ -0.72
TPM1-202ENST00000288398 LAMTOR1Q6IAA8 161 aa10.54□□□□□ -0.72
TPM1-202ENST00000288398 ZNF818PQ6ZRF7 136 aa10.54□□□□□ -0.72
TPM1-202ENST00000288398 CROCCP3Q8IVE0 287 aa10.54□□□□□ -0.72
TPM1-202ENST00000288398 CMTM1Q8IZ96 169 aa10.54□□□□□ -0.72
TPM1-202ENST00000288398 ZNF502Q8TBZ5 544 aa10.54□□□□□ -0.72
TPM1-202ENST00000288398 GIMAP1Q8WWP7 306 aa10.54□□□□□ -0.72
TPM1-202ENST00000288398 SLC25A38Q96DW6 304 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms