RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 CA2P00918 260 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 OR8U8P0C7N1 319 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 CDK2P24941 298 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 FMO3P31513 532 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 CD200P41217 278 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 PSMB2P49721 201 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 TDGF1P3P51864 188 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 SLC25A1P53007 311 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 ELF3P78545 371 aaPredicted RBP3.47□□□□□ -1.85
CD44-202ENST00000278385 SLC10A1Q14973 349 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 ZNF146Q15072 292 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 TMEM236Q5W0B7 351 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 ZFAND6Q6FIF0 208 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 SLC35E4Q6ICL7 350 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 SPINK14Q6IE38 97 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 CLEC19AQ6UXS0 136 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 Q6ZRP5 223 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 FAM24BQ8N5W8 94 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 DEFB125Q8N687 156 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 MORN4Q8NDC4 146 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 OR11H6Q8NGC7 330 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 OR11H7Q8NGC8 314 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 TSLPQ969D9 159 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 APOBEC3DQ96AK3 386 aaPredicted RBP3.47□□□□□ -1.85
CD44-202ENST00000278385 PRAC1Q96KF2 57 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 SLC35G5Q96KT7 338 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 F2RL3Q96RI0 385 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 ATOH8Q96SQ7 321 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 PRSS27Q9BQR3 290 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 HSPB9Q9BQS6 159 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 C19orf24Q9BVV8 132 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 AICDAQ9GZX7 198 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 SLC25A31Q9H0C2 315 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 RNASE7Q9H1E1 156 aaKnown RBP3.47□□□□□ -1.85
CD44-202ENST00000278385 HES4Q9HCC6 221 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 RBFOX1Q9NWB1 397 aaKnown RBP3.47□□□□□ -1.85
CD44-202ENST00000278385 MED29Q9NX70 200 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 HDGFL3Q9Y3E1 203 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 FASNP49327 2511 aaKnown RBP3.46□□□□□ -1.85
CD44-202ENST00000278385 DSPP15924 2871 aaKnown RBP3.46□□□□□ -1.85
CD44-202ENST00000278385 TRAV9-2A0A087WT02 112 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 A0A0G2JN53 185 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 PLAC8L1A1L4L8 177 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 TRAPPC13A5PLN9 417 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 PGPA6NDG6 321 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 CCDC160A6NGH7 325 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 C16orf97H3BN30 126 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 DEGS1O15121 323 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 PSPHP1O15172 72 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 DHRS3O75911 302 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 ZNF432O94892 652 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 CDRT1O95170 752 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 TRBV12-3P01733 135 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 IGHMP01871 453 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 HBZP02008 142 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 CSF3P09919 207 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 LAMP1P11279 417 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 SPI1P17947 270 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 TALDO1P37837 337 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 CA7P43166 264 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 SSR2P43308 183 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 NDUFV3P56181 108 aaKnown RBP3.46□□□□□ -1.86
CD44-202ENST00000278385 DAD1P61803 113 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 GNG5P63218 68 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 CYCSP99999 105 aaKnown RBP3.46□□□□□ -1.86
CD44-202ENST00000278385 Q499Y3 187 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 SLC25A30Q5SVS4 291 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 LCN12Q6JVE5 192 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 TIFABQ6ZNK6 161 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 TMEM179BQ7Z7N9 219 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 IFT20Q8IY31 132 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 RFLNBQ8N5W9 214 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 STPG4Q8N801 248 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 APCDD1LQ8NCL9 501 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 OR2T4Q8NH00 348 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 OR4S2Q8NH73 311 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 GNPDA2Q8TDQ7 276 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 GEMIN6Q8WXD5 167 aaKnown RBP3.46□□□□□ -1.86
CD44-202ENST00000278385 GALMQ96C23 342 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 SMIM8Q96KF7 97 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 SIGLEC12Q96PQ1 595 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 SERPINI1Q99574 410 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 GABARAPL3Q9BY60 117 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 DEFB127Q9H1M4 99 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 PARLQ9H300 379 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 CDC42EP4Q9H3Q1 356 aaKnown RBP3.46□□□□□ -1.86
CD44-202ENST00000278385 ACER3Q9NUN7 267 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 KLF13Q9Y2Y9 288 aaPredicted RBP3.46□□□□□ -1.86
CD44-202ENST00000278385 RFNGQ9Y644 331 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 IGSF10Q6WRI0 2623 aa3.46□□□□□ -1.86
CD44-202ENST00000278385 ZNF462Q96JM2 2506 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 LOC400499M0QZD8 3231 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 BORCS7-ASMTA0A0B4J1R7 106 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 WI2-2373I1.2A0A1W2PRP0 233 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 C5orf49A4QMS7 147 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 OR5H14A6NHG9 310 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 CYSRT1A8MQ03 144 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 ZNF850A8MQ14 1090 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 C4orf51C9J302 202 aa3.45□□□□□ -1.86
CD44-202ENST00000278385 H3BP45 60 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms