RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 VGLL1Q99990 258 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 RABAC1Q9UI14 185 aa7.7□□□□□ -1.18
PDGFC-201ENST00000274071 KBTBD11-OT1A0A1B0GTJ5 212 aa7.69□□□□□ -1.18
PDGFC-201ENST00000274071 SP9P0CG40 484 aa7.69□□□□□ -1.18
PDGFC-201ENST00000274071 TNFRSF4P43489 277 aa7.69□□□□□ -1.18
PDGFC-201ENST00000274071 RPL31P62899 125 aaKnown RBP7.69□□□□□ -1.18
PDGFC-201ENST00000274071 CEACAM16Q2WEN9 425 aa7.69□□□□□ -1.18
PDGFC-201ENST00000274071 GCSAMLQ5JQS6 135 aa7.69□□□□□ -1.18
PDGFC-201ENST00000274071 NT5CQ8TCD5 201 aa7.69□□□□□ -1.18
PDGFC-201ENST00000274071 CCL28Q9NRJ3 127 aa7.69□□□□□ -1.18
PDGFC-201ENST00000274071 MBNL3Q9NUK0 354 aaKnown RBP7.69□□□□□ -1.18
PDGFC-201ENST00000274071 PILRAQ9UKJ1 303 aa7.69□□□□□ -1.18
PDGFC-201ENST00000274071 RPS21P63220 83 aaKnown RBP7.69□□□□□ -1.18
PDGFC-201ENST00000274071 TFF3Q07654 80 aa7.69□□□□□ -1.18
PDGFC-201ENST00000274071 KLF5Q13887 457 aaPredicted RBP7.69□□□□□ -1.18
PDGFC-201ENST00000274071 FXYD3Q14802 87 aa7.69□□□□□ -1.18
PDGFC-201ENST00000274071 SPEM1Q8N4L4 309 aa7.69□□□□□ -1.18
PDGFC-201ENST00000274071 OR52E5Q8NH55 327 aa7.69□□□□□ -1.18
PDGFC-201ENST00000274071 NPCDR1Q9BY65 106 aa7.69□□□□□ -1.18
PDGFC-201ENST00000274071 RNASE7Q9H1E1 156 aaKnown RBP7.69□□□□□ -1.18
PDGFC-201ENST00000274071 YAE1D1Q9NRH1 226 aa7.69□□□□□ -1.18
PDGFC-201ENST00000274071 OR2W1Q9Y3N9 320 aa7.69□□□□□ -1.18
PDGFC-201ENST00000274071 NCOA6Q14686 2063 aaPredicted RBP7.69□□□□□ -1.18
PDGFC-201ENST00000274071 hCG_38984A0A1B0GV85 526 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 A0A1W2PQU0 124 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 C17orf51A8MQB3 221 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 H0Y980 276 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 PGLYRP1O75594 196 aaPredicted RBP7.68□□□□□ -1.18
PDGFC-201ENST00000274071 IGHMP01871 453 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 FCGR2BP31994 310 aaPredicted RBP7.68□□□□□ -1.18
PDGFC-201ENST00000274071 OR1D4P47884 311 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 RPS15AP62244 130 aaKnown RBP7.68□□□□□ -1.18
PDGFC-201ENST00000274071 PDCD1Q15116 288 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 VWC2Q2TAL6 325 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 PMCHL2Q9BQD1 86 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 C20orf78Q9BR46 151 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 ANAPC13Q9BS18 74 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 SPXQ9BT56 116 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 LYRM4Q9HD34 91 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 PHPT1Q9NRX4 125 aaPredicted RBP7.68□□□□□ -1.18
PDGFC-201ENST00000274071 ZNF391Q9UJN7 358 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 BRWD1Q9NSI6 2320 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 F8W1H4 67 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 KLF7O75840 302 aaPredicted RBP7.68□□□□□ -1.18
PDGFC-201ENST00000274071 MT-ATP6P00846 226 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 MT-ATP8P03928 68 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 CR1LQ2VPA4 569 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 TMEM196Q5HYL7 178 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 DTX1Q86Y01 620 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 TM4SF19Q96DZ7 209 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 SRSF8Q9BRL6 282 aaKnown RBP7.68□□□□□ -1.18
PDGFC-201ENST00000274071 C19orf25Q9UFG5 118 aaPredicted RBP7.68□□□□□ -1.18
PDGFC-201ENST00000274071 PCDH15Q96QU1 1955 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 NKX2-8O15522 239 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 SPRY1O43609 319 aaPredicted RBP7.68□□□□□ -1.18
PDGFC-201ENST00000274071 LEPROTL1O95214 131 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 NUDT14O95848 222 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 F2RP25116 425 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 TMEM14EPQ6UXP3 125 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 SSX8Q7RTT4 187 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 RAB1CQ92928 201 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 LYZL4Q96KX0 146 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 KCNK17Q96T54 332 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 TXNDC17Q9BRA2 123 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 SAP30LQ9HAJ7 183 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 CYSLTR1Q9Y271 337 aa7.68□□□□□ -1.18
PDGFC-201ENST00000274071 CD300LBA8K4G0 201 aa7.67□□□□□ -1.18
PDGFC-201ENST00000274071 C9JCJ5 164 aa7.67□□□□□ -1.18
PDGFC-201ENST00000274071 CER1O95813 267 aa7.67□□□□□ -1.18
PDGFC-201ENST00000274071 EML2O95834 649 aa7.67□□□□□ -1.18
PDGFC-201ENST00000274071 IFI6P09912 130 aa7.67□□□□□ -1.18
PDGFC-201ENST00000274071 FGF6P10767 208 aa7.67□□□□□ -1.18
PDGFC-201ENST00000274071 PSG2P11465 335 aa7.67□□□□□ -1.18
PDGFC-201ENST00000274071 FUT7Q11130 342 aa7.67□□□□□ -1.18
PDGFC-201ENST00000274071 OR8B8Q15620 311 aa7.67□□□□□ -1.18
PDGFC-201ENST00000274071 PIGYQ3MUY2 71 aa7.67□□□□□ -1.18
PDGFC-201ENST00000274071 TIMM23BQ5SRD1 257 aa7.67□□□□□ -1.18
PDGFC-201ENST00000274071 TTC9CQ8N5M4 171 aa7.67□□□□□ -1.18
PDGFC-201ENST00000274071 ARPC1AQ92747 370 aa7.67□□□□□ -1.18
PDGFC-201ENST00000274071 GRAMD2BQ96HH9 432 aa7.67□□□□□ -1.18
PDGFC-201ENST00000274071 C18orf15Q96N68 181 aa7.67□□□□□ -1.18
PDGFC-201ENST00000274071 C1QTNF4Q9BXJ3 329 aa7.67□□□□□ -1.18
PDGFC-201ENST00000274071 CDIP1Q9H305 208 aa7.67□□□□□ -1.18
PDGFC-201ENST00000274071 LINC00312Q9Y6C7 94 aa7.67□□□□□ -1.18
PDGFC-201ENST00000274071 A0A1W2PQF6 199 aa7.67□□□□□ -1.18
PDGFC-201ENST00000274071 PRR33A8MZF0 331 aa7.67□□□□□ -1.18
PDGFC-201ENST00000274071 IL11P20809 199 aa7.67□□□□□ -1.18
PDGFC-201ENST00000274071 CA13Q8N1Q1 262 aa7.67□□□□□ -1.18
PDGFC-201ENST00000274071 C16orf52Q8NHV5 167 aa7.67□□□□□ -1.18
PDGFC-201ENST00000274071 LRRC29Q8WV35 223 aa7.67□□□□□ -1.18
PDGFC-201ENST00000274071 RAX2Q96IS3 184 aa7.67□□□□□ -1.18
PDGFC-201ENST00000274071 ZNF331Q9NQX6 463 aaPredicted RBP7.67□□□□□ -1.18
PDGFC-201ENST00000274071 MED29Q9NX70 200 aa7.67□□□□□ -1.18
PDGFC-201ENST00000274071 RALYQ9UKM9 306 aaKnown RBP7.67□□□□□ -1.18
PDGFC-201ENST00000274071 LY96Q9Y6Y9 160 aa7.67□□□□□ -1.18
PDGFC-201ENST00000274071 IGHV1-24A0A0C4DH33 117 aa7.66□□□□□ -1.18
PDGFC-201ENST00000274071 OR7C1O76099 320 aaPredicted RBP7.66□□□□□ -1.18
PDGFC-201ENST00000274071 IGKV1-39P01597 117 aa7.66□□□□□ -1.18
PDGFC-201ENST00000274071 IGHV3-7P01780 117 aa7.66□□□□□ -1.18
PDGFC-201ENST00000274071 IGKV1D-39P04432 117 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms